BLASTX nr result

ID: Dioscorea21_contig00008797 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00008797
         (1112 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21551.3| unnamed protein product [Vitis vinifera]              360   3e-97
ref|XP_002278030.1| PREDICTED: RNA-binding protein 39-like [Viti...   360   3e-97
ref|XP_004160482.1| PREDICTED: RNA-binding protein 39-like [Cucu...   357   4e-96
ref|XP_004141977.1| PREDICTED: RNA-binding protein 39-like [Cucu...   357   4e-96
ref|XP_003526844.1| PREDICTED: uncharacterized protein LOC100802...   352   1e-94

>emb|CBI21551.3| unnamed protein product [Vitis vinifera]
          Length = 504

 Score =  360 bits (925), Expect = 3e-97
 Identities = 187/268 (69%), Positives = 216/268 (80%), Gaps = 4/268 (1%)
 Frame = +3

Query: 54   RKLYVGNLHFSITEDQLRQIFEPFGPVELVQLPLDLETGHCRGYGFVQFAQLEHAKAAQS 233
            RKLYVGNLHF++TE QLRQIFEPFG VELVQLPLDLETG C+G+GFVQFA+LEHAKAAQ+
Sbjct: 235  RKLYVGNLHFNMTELQLRQIFEPFGRVELVQLPLDLETGQCKGFGFVQFAELEHAKAAQN 294

Query: 234  LNGKLDIAGRIIKVSAVTDHVPGQDSGA-ATELDDED-GALSINAQSRAILMQKLDRTGT 407
            LNGKLDIAGRIIKVS+VTDH+  QD+GA A + DD+D G LS+NAQSRA+LMQKLDRTG 
Sbjct: 295  LNGKLDIAGRIIKVSSVTDHIGVQDAGAKAADFDDDDGGGLSLNAQSRALLMQKLDRTGI 354

Query: 408  ASSIAESLAVPALNGSLTNPLGLGLPVNLQA--SLPTLVPSALPSMVTEPVGKPSECLLL 581
            ASSIA SL VP LNGS  N   + L +N QA  S P L    + S  +EPVG P+ECLLL
Sbjct: 355  ASSIAGSLGVPMLNGSAPNQQAISLSINGQAAVSAPALPTQVVTSPASEPVGTPTECLLL 414

Query: 582  KNMFDPKTETEPDFDLDIKEDVQEECSKFGRLRHIYVDKNSDGCVYLCYETVAAATSCQQ 761
            KNMFDP TE +PDFDLDIKE+VQEECS FGR++HIYV+K+S G VYL +ETV AA + Q+
Sbjct: 415  KNMFDPATEIDPDFDLDIKEEVQEECSNFGRVKHIYVEKHSAGYVYLRFETVEAAVTAQR 474

Query: 762  AMHGRWFAGRSISTTFMSQEEYGAKFKG 845
            AMH RWFA R IS  F+   +Y AKFKG
Sbjct: 475  AMHMRWFARRLISAIFLQPRDYEAKFKG 502


>ref|XP_002278030.1| PREDICTED: RNA-binding protein 39-like [Vitis vinifera]
          Length = 542

 Score =  360 bits (925), Expect = 3e-97
 Identities = 187/268 (69%), Positives = 216/268 (80%), Gaps = 4/268 (1%)
 Frame = +3

Query: 54   RKLYVGNLHFSITEDQLRQIFEPFGPVELVQLPLDLETGHCRGYGFVQFAQLEHAKAAQS 233
            RKLYVGNLHF++TE QLRQIFEPFG VELVQLPLDLETG C+G+GFVQFA+LEHAKAAQ+
Sbjct: 273  RKLYVGNLHFNMTELQLRQIFEPFGRVELVQLPLDLETGQCKGFGFVQFAELEHAKAAQN 332

Query: 234  LNGKLDIAGRIIKVSAVTDHVPGQDSGA-ATELDDED-GALSINAQSRAILMQKLDRTGT 407
            LNGKLDIAGRIIKVS+VTDH+  QD+GA A + DD+D G LS+NAQSRA+LMQKLDRTG 
Sbjct: 333  LNGKLDIAGRIIKVSSVTDHIGVQDAGAKAADFDDDDGGGLSLNAQSRALLMQKLDRTGI 392

Query: 408  ASSIAESLAVPALNGSLTNPLGLGLPVNLQA--SLPTLVPSALPSMVTEPVGKPSECLLL 581
            ASSIA SL VP LNGS  N   + L +N QA  S P L    + S  +EPVG P+ECLLL
Sbjct: 393  ASSIAGSLGVPMLNGSAPNQQAISLSINGQAAVSAPALPTQVVTSPASEPVGTPTECLLL 452

Query: 582  KNMFDPKTETEPDFDLDIKEDVQEECSKFGRLRHIYVDKNSDGCVYLCYETVAAATSCQQ 761
            KNMFDP TE +PDFDLDIKE+VQEECS FGR++HIYV+K+S G VYL +ETV AA + Q+
Sbjct: 453  KNMFDPATEIDPDFDLDIKEEVQEECSNFGRVKHIYVEKHSAGYVYLRFETVEAAVTAQR 512

Query: 762  AMHGRWFAGRSISTTFMSQEEYGAKFKG 845
            AMH RWFA R IS  F+   +Y AKFKG
Sbjct: 513  AMHMRWFARRLISAIFLQPRDYEAKFKG 540


>ref|XP_004160482.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
          Length = 598

 Score =  357 bits (915), Expect = 4e-96
 Identities = 181/267 (67%), Positives = 212/267 (79%), Gaps = 3/267 (1%)
 Frame = +3

Query: 54   RKLYVGNLHFSITEDQLRQIFEPFGPVELVQLPLDLETGHCRGYGFVQFAQLEHAKAAQS 233
            RKLYVGNLHF++TE  LR+IFE FGPVELVQLPLDLE+GHC+G+GFVQFA LEHAKAAQS
Sbjct: 331  RKLYVGNLHFNMTETHLREIFEAFGPVELVQLPLDLESGHCKGFGFVQFAHLEHAKAAQS 390

Query: 234  LNGKLDIAGRIIKVSAVTDHVPGQDSGAATEL--DDEDGALSINAQSRAILMQKLDRTGT 407
            LNGKL+IAGR IKVS+VTDH+  Q+S A +    DDE G L++NAQSRA+LMQKLDRTG 
Sbjct: 391  LNGKLEIAGRTIKVSSVTDHIGAQESVAKSNDLDDDEGGGLALNAQSRALLMQKLDRTGI 450

Query: 408  ASSIAESLAVPALNGSLTNPLGLGLPVNLQASLPT-LVPSALPSMVTEPVGKPSECLLLK 584
            A+SIA SL  P LNGS  N     LPVN QA++   ++P+     V + VG PSECLLLK
Sbjct: 451  ATSIAGSLGAPVLNGSAPNQRSTSLPVNGQAAVAAPVLPANFTPPVLQSVGSPSECLLLK 510

Query: 585  NMFDPKTETEPDFDLDIKEDVQEECSKFGRLRHIYVDKNSDGCVYLCYETVAAATSCQQA 764
            NMFDP TET PDFD++IKEDV+EECSK+GR++HIYVDKNS GCVYL Y+TV AA + Q+A
Sbjct: 511  NMFDPSTETAPDFDMEIKEDVEEECSKYGRVKHIYVDKNSAGCVYLQYDTVEAAINAQRA 570

Query: 765  MHGRWFAGRSISTTFMSQEEYGAKFKG 845
            MH RWFAGR IS  FM  + Y AKF G
Sbjct: 571  MHLRWFAGRQISVLFMQPQVYEAKFIG 597


>ref|XP_004141977.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
          Length = 598

 Score =  357 bits (915), Expect = 4e-96
 Identities = 181/267 (67%), Positives = 212/267 (79%), Gaps = 3/267 (1%)
 Frame = +3

Query: 54   RKLYVGNLHFSITEDQLRQIFEPFGPVELVQLPLDLETGHCRGYGFVQFAQLEHAKAAQS 233
            RKLYVGNLHF++TE  LR+IFE FGPVELVQLPLDLE+GHC+G+GFVQFA LEHAKAAQS
Sbjct: 331  RKLYVGNLHFNMTETHLREIFEAFGPVELVQLPLDLESGHCKGFGFVQFAHLEHAKAAQS 390

Query: 234  LNGKLDIAGRIIKVSAVTDHVPGQDSGAATEL--DDEDGALSINAQSRAILMQKLDRTGT 407
            LNGKL+IAGR IKVS+VTDH+  Q+S A +    DDE G L++NAQSRA+LMQKLDRTG 
Sbjct: 391  LNGKLEIAGRTIKVSSVTDHIGAQESVAKSNDLDDDEGGGLALNAQSRALLMQKLDRTGI 450

Query: 408  ASSIAESLAVPALNGSLTNPLGLGLPVNLQASLPT-LVPSALPSMVTEPVGKPSECLLLK 584
            A+SIA SL  P LNGS  N     LPVN QA++   ++P+     V + VG PSECLLLK
Sbjct: 451  ATSIAGSLGAPVLNGSAPNQRSTSLPVNGQAAVAAPVLPANFTPPVLQSVGSPSECLLLK 510

Query: 585  NMFDPKTETEPDFDLDIKEDVQEECSKFGRLRHIYVDKNSDGCVYLCYETVAAATSCQQA 764
            NMFDP TET PDFD++IKEDV+EECSK+GR++HIYVDKNS GCVYL Y+TV AA + Q+A
Sbjct: 511  NMFDPSTETAPDFDMEIKEDVEEECSKYGRVKHIYVDKNSAGCVYLQYDTVEAAINAQRA 570

Query: 765  MHGRWFAGRSISTTFMSQEEYGAKFKG 845
            MH RWFAGR IS  FM  + Y AKF G
Sbjct: 571  MHLRWFAGRQISVLFMQPQVYEAKFIG 597


>ref|XP_003526844.1| PREDICTED: uncharacterized protein LOC100802446 [Glycine max]
          Length = 549

 Score =  352 bits (902), Expect = 1e-94
 Identities = 179/268 (66%), Positives = 212/268 (79%), Gaps = 4/268 (1%)
 Frame = +3

Query: 54   RKLYVGNLHFSITEDQLRQIFEPFGPVELVQLPLDLETGHCRGYGFVQFAQLEHAKAAQS 233
            RKLYVGNLHF++TE QLR+IFEPFGPVE+VQLPLDLETGHC+G+GFVQFA LEHAKAAQS
Sbjct: 284  RKLYVGNLHFNMTESQLREIFEPFGPVEIVQLPLDLETGHCKGFGFVQFAHLEHAKAAQS 343

Query: 234  LNGKLDIAGRIIKVSAVTDHVPGQDSGA-ATELDDEDGALSINAQSRAILMQKLDRTGTA 410
            LNGKL+IAGR IKVS+VTDHV  QD+ A + + DD++G LS+NAQSRA+LMQKLDR+G  
Sbjct: 344  LNGKLEIAGRTIKVSSVTDHVGNQDTTAKSADFDDDEGGLSLNAQSRALLMQKLDRSG-- 401

Query: 411  SSIAESLAVPALNGSLTNP---LGLGLPVNLQASLPTLVPSALPSMVTEPVGKPSECLLL 581
              IA S+ +P  NGS       + +G P  + A  P +    +P  VTEPVG PSECLLL
Sbjct: 402  --IAASIGLPIANGSSPAQQAIMPIGNPGIVPAVAPAVPTQIMPIPVTEPVGNPSECLLL 459

Query: 582  KNMFDPKTETEPDFDLDIKEDVQEECSKFGRLRHIYVDKNSDGCVYLCYETVAAATSCQQ 761
            KNMFDP TETEPDFDLDIKEDV+EECSK+GR++HIYVDK S G VYL +ETV AA++ Q+
Sbjct: 460  KNMFDPNTETEPDFDLDIKEDVEEECSKYGRVKHIYVDKRSAGFVYLQFETVEAASAAQR 519

Query: 762  AMHGRWFAGRSISTTFMSQEEYGAKFKG 845
            AMH RWFAGR IS  +M  + Y  KFKG
Sbjct: 520  AMHTRWFAGRMISAIYMLPQMYETKFKG 547


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