BLASTX nr result

ID: Dioscorea21_contig00008788 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00008788
         (753 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003516876.1| PREDICTED: eukaryotic translation initiation...   157   2e-36
gb|ADO64263.1| eukaryotic translation initiation factor 4G [Cari...   152   9e-35
ref|XP_003532230.1| PREDICTED: eukaryotic translation initiation...   150   2e-34
ref|XP_002326843.1| predicted protein [Populus trichocarpa] gi|2...   148   1e-33
ref|XP_002269466.2| PREDICTED: eukaryotic translation initiation...   144   2e-32

>ref|XP_003516876.1| PREDICTED: eukaryotic translation initiation factor 4G-like
           [Glycine max]
          Length = 1709

 Score =  157 bits (398), Expect = 2e-36
 Identities = 95/210 (45%), Positives = 118/210 (56%), Gaps = 6/210 (2%)
 Frame = +2

Query: 137 MSFNQSRAEKSEGQPRKSGRSGNSGYHRXXXXXXXXXXXXXXXXXXXXXNTASVSFNRS- 313
           MSFNQS+++KS+   RKSGRSG+    R                      + S+S +RS 
Sbjct: 1   MSFNQSKSDKSDAVYRKSGRSGSFNQQRGPFGGAYGKGGGGGAGP-----SPSLSSSRSF 55

Query: 314 SKKSGNAPQYRXXXXXXXXXXXXXXXXXXXXRTAQNGAHAQIPSHGSSDAPSTSAKPVDS 493
           +KKS N  Q                      RT  NG++ Q   HG SDAP T+A    S
Sbjct: 56  NKKSNNNAQGGQSRVNPTPVNSTESNSTYAARTVPNGSYVQPQIHGGSDAPITNATAKSS 115

Query: 494 S-----RNSRALPKAPPSQPTAGASDSAAPVTPAKGDASKQYTLQFGTISPGIMNGMQIP 658
                 R+SRA+PKAP SQP + + D AAP TPAK DASK +  QFG+ISPG MNGM IP
Sbjct: 116 ELLAAQRSSRAVPKAPTSQPPSMSPDPAAPTTPAKADASKAFPFQFGSISPGFMNGMAIP 175

Query: 659 ARTSSAPPNLDEQKSDQARHDPFWAMPTLP 748
           ARTSSAPPN+DEQ+ DQARHD    +P++P
Sbjct: 176 ARTSSAPPNIDEQRRDQARHDSLRPVPSMP 205


>gb|ADO64263.1| eukaryotic translation initiation factor 4G [Carica papaya]
          Length = 1899

 Score =  152 bits (383), Expect = 9e-35
 Identities = 94/214 (43%), Positives = 115/214 (53%), Gaps = 9/214 (4%)
 Frame = +2

Query: 137 MSFNQSRAEKSEGQPRKSGRSGNSGYHRXXXXXXXXXXXXXXXXXXXXXNTASVSF--NR 310
           MSFNQSR+++++ Q RKSGRS +S   R                     +++S S   NR
Sbjct: 1   MSFNQSRSDRNDAQYRKSGRSASSNQQRSSSGGYGKGAGAGPAPSPTITSSSSSSVISNR 60

Query: 311 SSKKSGNAPQYRXXXXXXXXXXXXXXXXXXXXRTAQNGAHAQIPSHGSSDAP--STSAKP 484
           SS K  N  Q                      R  QNGAH     HG +DAP  S ++K 
Sbjct: 61  SSFKKSNNAQGGQSRVSLPAVNSSESSNASTPRNVQNGAHVPPQLHGGADAPVASGASKQ 120

Query: 485 VDSS---RNSRALPKAPPSQPTAGASDSAAPVTPAKG--DASKQYTLQFGTISPGIMNGM 649
            + S   R +R LPKAP SQ  +  S+   P TPAK   DASK +  QFG+ISPG MNGM
Sbjct: 121 TEVSTPQRTTRTLPKAPTSQSASMTSEITGPTTPAKAPVDASKAFPFQFGSISPGFMNGM 180

Query: 650 QIPARTSSAPPNLDEQKSDQARHDPFWAMPTLPL 751
           QIPARTSSAPPNLDEQ+ DQARHD    +P LP+
Sbjct: 181 QIPARTSSAPPNLDEQRRDQARHDSLGPLPNLPI 214


>ref|XP_003532230.1| PREDICTED: eukaryotic translation initiation factor 4G-like
           [Glycine max]
          Length = 1847

 Score =  150 bits (380), Expect = 2e-34
 Identities = 97/219 (44%), Positives = 119/219 (54%), Gaps = 15/219 (6%)
 Frame = +2

Query: 137 MSFNQSRAEKSEGQPRKSGRSGNSGYHRXXXXXXXXXXXXXXXXXXXXXNTASVSFNRS- 313
           MSFNQS+++KS+   RKSGR G+    R                      + S+S NRS 
Sbjct: 1   MSFNQSKSDKSDAVYRKSGRPGSFNQQRGPSGGAYGKGGGGGAGP-----SPSLSSNRSF 55

Query: 314 SKKSGNAPQYRXXXXXXXXXXXXXXXXXXXXRTAQNGAHAQIPSHGSSDAPSTSA--KPV 487
           +KKS N  Q                      RT  NG+H Q   HG SDAP T+A  KP 
Sbjct: 56  NKKSNNNAQGGQSRVNPTPVNSTESNSTYAARTVPNGSHVQPHIHGGSDAPITNATAKPS 115

Query: 488 DS---SRNSRALPKAPPSQPTAGASDSAAPVTPAK---------GDASKQYTLQFGTISP 631
           +S    R++R +PKAP SQP A +S  AAP TPAK          DASK +  QFG+ISP
Sbjct: 116 ESLAAQRSTRTVPKAPTSQPPAMSSYPAAPTTPAKVICMLFYAPADASKAFPFQFGSISP 175

Query: 632 GIMNGMQIPARTSSAPPNLDEQKSDQARHDPFWAMPTLP 748
           G MNGM IPARTSSAPPN+DEQ+ +QARHD F   P++P
Sbjct: 176 GFMNGMAIPARTSSAPPNIDEQRREQARHDSFRPAPSMP 214


>ref|XP_002326843.1| predicted protein [Populus trichocarpa] gi|222835158|gb|EEE73593.1|
           predicted protein [Populus trichocarpa]
          Length = 311

 Score =  148 bits (373), Expect = 1e-33
 Identities = 105/245 (42%), Positives = 127/245 (51%), Gaps = 41/245 (16%)
 Frame = +2

Query: 137 MSFNQSRA--EKSEGQPRKSGRSGNSGYHRXXXXXXXXXXXXXXXXXXXXX-NTASVSFN 307
           MS+NQSR+  +KSE Q RKSGRS +S   R                      +++S+S N
Sbjct: 1   MSYNQSRSGSDKSELQYRKSGRSISSNQLRTSSQSYGKGGGGGGGGPPVPSPSSSSLSSN 60

Query: 308 RS-SKKSGNAPQ-----YRXXXXXXXXXXXXXXXXXXXXRTAQNGAHAQIPSHGSSDAP- 466
           RS +KKS   PQ      R                    R  QNGA AQ P HG+SDAP 
Sbjct: 61  RSFNKKSSYVPQGGGQSSRVNVAPVVNSSDSGNNAASTIRNVQNGAAAQPPLHGTSDAPP 120

Query: 467 --STSAKPVDS---SRNSRALPKAPPSQPTAGASDSAAPVTPAKG--------------- 586
             S+  KP ++    R++RA+PKAP SQP   +S+S AP TPAKG               
Sbjct: 121 PASSVTKPTETPATQRSARAVPKAPTSQPATISSESGAPTTPAKGKFAVSVWYYGDNKSC 180

Query: 587 -----------DASKQYTLQFGTISPGIMNGMQIPARTSSAPPNLDEQKSDQARHDPFWA 733
                      DASK +  QFG+ISPG MNGMQ+PARTSSAPPNLDEQK DQAR D F  
Sbjct: 181 IYNVSDVTAPVDASKAFAFQFGSISPGFMNGMQVPARTSSAPPNLDEQKRDQARQDTFRP 240

Query: 734 MPTLP 748
            P+LP
Sbjct: 241 APSLP 245


>ref|XP_002269466.2| PREDICTED: eukaryotic translation initiation factor 4G-like [Vitis
           vinifera]
          Length = 1935

 Score =  144 bits (364), Expect = 2e-32
 Identities = 102/215 (47%), Positives = 123/215 (57%), Gaps = 10/215 (4%)
 Frame = +2

Query: 137 MSFNQSRAEKSEGQPRKSG-RSGNSGYHRXXXXXXXXXXXXXXXXXXXXXNTASVSFNRS 313
           MS NQSR++K++G  RKSG RSG+S   R                     ++ S+S NRS
Sbjct: 1   MSINQSRSDKNDGHYRKSGARSGSSAQQRTFLVGAGKGGGNAPPSSAFVPSS-SLSSNRS 59

Query: 314 SKKSGNAPQYRXXXXXXXXXXXXXXXXXXXXRTAQNGAHAQIPSHGSSDAPSTSAKPVDS 493
            K+  NA Q                      R  QNG H Q  SHG SDAP+   KP DS
Sbjct: 60  FKRPNNA-QGGQSRVSVGAANSESANPSSQQRGIQNGVHTQPSSHGVSDAPA--GKPTDS 116

Query: 494 S--RNSRALPKAP----PSQPTAG-ASDSAAPVTP--AKGDASKQYTLQFGTISPGIMNG 646
           +  R SRA PKAP    PS  TA  +SD+A+   P  A  D+  Q++LQFG+I+PG +NG
Sbjct: 117 APQRISRA-PKAPSSKVPSSYTAAVSSDTASQTAPDNAPDDSRLQFSLQFGSINPGFVNG 175

Query: 647 MQIPARTSSAPPNLDEQKSDQARHDPFWAMPTLPL 751
           MQIPARTSSAPPNLDEQK DQARHD F A+PTLPL
Sbjct: 176 MQIPARTSSAPPNLDEQKRDQARHDTFIAVPTLPL 210


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