BLASTX nr result

ID: Dioscorea21_contig00008777 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00008777
         (1074 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002452716.1| hypothetical protein SORBIDRAFT_04g031240 [S...   154   4e-35
ref|XP_002277896.1| PREDICTED: E3 ubiquitin-protein ligase Os04g...   149   9e-34
ref|XP_002303424.1| predicted protein [Populus trichocarpa] gi|2...   149   2e-33
ref|XP_004138996.1| PREDICTED: RING-H2 finger protein ATL51-like...   145   2e-32
ref|XP_004136192.1| PREDICTED: E3 ubiquitin-protein ligase Os04g...   144   5e-32

>ref|XP_002452716.1| hypothetical protein SORBIDRAFT_04g031240 [Sorghum bicolor]
           gi|241932547|gb|EES05692.1| hypothetical protein
           SORBIDRAFT_04g031240 [Sorghum bicolor]
          Length = 387

 Score =  154 bits (389), Expect = 4e-35
 Identities = 85/183 (46%), Positives = 105/183 (57%), Gaps = 10/183 (5%)
 Frame = -3

Query: 877 CSQGICGPRCLQFCTRVYLPTPPTFXXXXXXXXXXXS-----PLVIAVIAGVLASLFLLC 713
           CSQG+C   C Q+C  ++ P PP F           S     PLVIA+I GVLAS FLL 
Sbjct: 29  CSQGLCSMYCPQWCYFIFPPPPPAFDIAGPGSGDDSSGPTFSPLVIAII-GVLASAFLLV 87

Query: 712 CYL-ILSKXXXXXXXXXXXRXXXXXXXXXXXXXXXXXXXXAG----DGLDQTLINRIAAC 548
            Y  I+SK                                 G    DGLD+TLIN+I  C
Sbjct: 88  SYYTIISKYCGTFSSLRNMLFGPRRGRGGVGGGDSRSLEPWGAVPSDGLDETLINKITVC 147

Query: 547 KYRQSEGLVGGTDCSVCLTEFQEGESLRLLPECTHAFHVACIDTWLKNHSNCPICRSNIV 368
           KY++ +G V  TDCSVCL EF++GESLRLLP+C+HAFH+ CIDTWLK+HSNCP+CR NI 
Sbjct: 148 KYKRGDGFVDSTDCSVCLGEFRDGESLRLLPKCSHAFHLPCIDTWLKSHSNCPLCRCNIA 207

Query: 367 WMA 359
           ++A
Sbjct: 208 FVA 210


>ref|XP_002277896.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Vitis
           vinifera]
          Length = 375

 Score =  149 bits (377), Expect = 9e-34
 Identities = 87/189 (46%), Positives = 108/189 (57%), Gaps = 4/189 (2%)
 Frame = -3

Query: 877 CSQGICGPRCLQFCTRVYLPTPPTFXXXXXXXXXXXSPLVIAVIAGVLASLFLLCCYL-I 701
           CSQG C   C Q+C  +  P PP F           SPLVIA+I G+LAS FLL  Y  I
Sbjct: 19  CSQGFCSLYCPQWCY-IPAPPPPYFEFPDENSGPNFSPLVIAII-GILASAFLLVSYYTI 76

Query: 700 LSKXXXXXXXXXXXRXXXXXXXXXXXXXXXXXXXXAGD-GLDQTLINRIAACKYRQSEGL 524
           +SK                                    GLD+ LI  I  CKY++ +GL
Sbjct: 77  ISKYCGNMERERRENQDINEELEDNHNPALHEPWHVATTGLDEALIKSITLCKYKKGDGL 136

Query: 523 VGGTDCSVCLTEFQEGESLRLLPECTHAFHVACIDTWLKNHSNCPICRSNIV--WMAPAE 350
           V GTDCSVCL+EF+E ESLRLLP+C+HAFHV CIDTWLK+HSNCP+CR+NIV   ++P +
Sbjct: 137 VEGTDCSVCLSEFEEEESLRLLPKCSHAFHVQCIDTWLKSHSNCPLCRANIVPTTVSPTQ 196

Query: 349 ERVVVVENP 323
               V+E+P
Sbjct: 197 LPPPVMESP 205


>ref|XP_002303424.1| predicted protein [Populus trichocarpa] gi|222840856|gb|EEE78403.1|
           predicted protein [Populus trichocarpa]
          Length = 342

 Score =  149 bits (375), Expect = 2e-33
 Identities = 80/177 (45%), Positives = 102/177 (57%), Gaps = 4/177 (2%)
 Frame = -3

Query: 877 CSQGICGPRCLQFCTRVYLPTPPTFXXXXXXXXXXXSPLVIAVIAGVLASLFLLCCYL-I 701
           CSQG C   C Q+C  +  P PP F           SPLVIA+I G+LAS FLL CY  I
Sbjct: 19  CSQGFCSLYCPQWCY-IISPPPPPFEFPDDDSSPIFSPLVIAII-GILASAFLLVCYYTI 76

Query: 700 LSKXXXXXXXXXXXRXXXXXXXXXXXXXXXXXXXXAG---DGLDQTLINRIAACKYRQSE 530
           +SK                                      G+D+ LI  I  CKY++ +
Sbjct: 77  ISKYCGNDYSARRRDQNHGQNEEFEDDHNSSLHEPWHAATTGVDEALIRSITVCKYKKGD 136

Query: 529 GLVGGTDCSVCLTEFQEGESLRLLPECTHAFHVACIDTWLKNHSNCPICRSNIVWMA 359
           GL+ GTDCSVCL+EF+E ES+RLLP+C+HAFHV CIDTWL++HSNCP+CR+NIV+ +
Sbjct: 137 GLIEGTDCSVCLSEFEEDESIRLLPKCSHAFHVPCIDTWLRSHSNCPLCRANIVFFS 193


>ref|XP_004138996.1| PREDICTED: RING-H2 finger protein ATL51-like [Cucumis sativus]
           gi|449517886|ref|XP_004165975.1| PREDICTED: RING-H2
           finger protein ATL51-like [Cucumis sativus]
          Length = 365

 Score =  145 bits (365), Expect = 2e-32
 Identities = 78/185 (42%), Positives = 100/185 (54%), Gaps = 1/185 (0%)
 Frame = -3

Query: 883 DYCSQGICGPRCLQFCTRVYLPTPPTFXXXXXXXXXXXS-PLVIAVIAGVLASLFLLCCY 707
           DYCSQ IC   C Q+C   + P PP F             PL++AVI G+LAS F+L  Y
Sbjct: 20  DYCSQEICSAFCPQWCAFAFPPPPPLFGLDDTDDSGTFFSPLIVAVI-GILASAFVLVTY 78

Query: 706 LILSKXXXXXXXXXXXRXXXXXXXXXXXXXXXXXXXXAGDGLDQTLINRIAACKYRQSEG 527
             +                                  AG GLD+ LI  I+  K+++ EG
Sbjct: 79  YAIVSKYCRRRVDDSGGGGSGDNLEADRVVNDTRQSGAGAGLDEALIKSISIYKFKKGEG 138

Query: 526 LVGGTDCSVCLTEFQEGESLRLLPECTHAFHVACIDTWLKNHSNCPICRSNIVWMAPAEE 347
           L+ G+DCSVCL+EFQE ESLRLLP+C+HAFH+ACIDTWLK+ S+CP+CR NI    P   
Sbjct: 139 LIEGSDCSVCLSEFQENESLRLLPKCSHAFHLACIDTWLKSSSSCPLCRCNIASTNPPPP 198

Query: 346 RVVVV 332
            V  +
Sbjct: 199 SVTAL 203


>ref|XP_004136192.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Cucumis
           sativus] gi|449532198|ref|XP_004173069.1| PREDICTED: E3
           ubiquitin-protein ligase Os04g0590900-like [Cucumis
           sativus]
          Length = 373

 Score =  144 bits (362), Expect = 5e-32
 Identities = 80/173 (46%), Positives = 99/173 (57%), Gaps = 3/173 (1%)
 Frame = -3

Query: 877 CSQGICGPRCLQFCTRVYLPTPPTFXXXXXXXXXXXSPLVIAVIAGVLASLFLLCCYL-I 701
           CSQG C   C Q+C  ++ P PP             SPLVIA+I G+LAS FLL  Y  I
Sbjct: 21  CSQGFCSVYCPQWCYIMFSPPPPL--EFPDNSGPHFSPLVIAII-GILASAFLLVTYYTI 77

Query: 700 LSKXXXXXXXXXXXRXXXXXXXXXXXXXXXXXXXXA--GDGLDQTLINRIAACKYRQSEG 527
           +SK                                     GLD+ LI  I  CKY++ +G
Sbjct: 78  ISKYCGNTNRLSGTGNHDPSEEYEDNHNPTFHEPWHVATTGLDEALIKSITVCKYKREDG 137

Query: 526 LVGGTDCSVCLTEFQEGESLRLLPECTHAFHVACIDTWLKNHSNCPICRSNIV 368
           LV G+DCSVCL+EFQE ESLRLLP+C+HAFH+ CIDTWLK+HSNCP+CR+NI+
Sbjct: 138 LVEGSDCSVCLSEFQEDESLRLLPKCSHAFHLQCIDTWLKSHSNCPLCRANII 190


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