BLASTX nr result

ID: Dioscorea21_contig00008754 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00008754
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318805.1| predicted protein [Populus trichocarpa] gi|2...    69   3e-10
emb|CBI22684.3| unnamed protein product [Vitis vinifera]               67   1e-09
ref|XP_002270827.1| PREDICTED: uncharacterized protein LOC100254...    67   1e-09
ref|XP_002321929.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
gb|ABK94883.1| unknown [Populus trichocarpa]                           66   3e-09

>ref|XP_002318805.1| predicted protein [Populus trichocarpa] gi|222859478|gb|EEE97025.1|
           predicted protein [Populus trichocarpa]
          Length = 264

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 35/49 (71%), Positives = 40/49 (81%)
 Frame = +1

Query: 226 KHLRISFRRDFRHKGRKEKCRGSGVYASLFGVGAPEALVIGVVALLVFG 372
           KHL ISF  +F  K RK +C+G  ++ASLFGVGAPEALVIGVVALLVFG
Sbjct: 62  KHLGISFSPNFVAKERKGRCKGKVIHASLFGVGAPEALVIGVVALLVFG 110


>emb|CBI22684.3| unnamed protein product [Vitis vinifera]
          Length = 257

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 44/101 (43%), Positives = 54/101 (53%), Gaps = 12/101 (11%)
 Frame = +1

Query: 106 PTPLFSNP-----TIVLISGNTS-------RFHAFXXXXXXXXXXXXXXXXXKHLRISFR 249
           PT  FS+P     TI  +S ++S        FH                   +HL IS +
Sbjct: 8   PTLFFSSPSTTKSTIYALSSSSSIPLPKGPSFHFSTLVPQPGLGPFSSWNGLRHLGISVK 67

Query: 250 RDFRHKGRKEKCRGSGVYASLFGVGAPEALVIGVVALLVFG 372
           +     GR+ +C+G  VYASLFGVGAPEALVIGVVALLVFG
Sbjct: 68  QKSLKIGRRGRCKGKVVYASLFGVGAPEALVIGVVALLVFG 108


>ref|XP_002270827.1| PREDICTED: uncharacterized protein LOC100254207 [Vitis vinifera]
          Length = 261

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 44/101 (43%), Positives = 54/101 (53%), Gaps = 12/101 (11%)
 Frame = +1

Query: 106 PTPLFSNP-----TIVLISGNTS-------RFHAFXXXXXXXXXXXXXXXXXKHLRISFR 249
           PT  FS+P     TI  +S ++S        FH                   +HL IS +
Sbjct: 12  PTLFFSSPSTTKSTIYALSSSSSIPLPKGPSFHFSTLVPQPGLGPFSSWNGLRHLGISVK 71

Query: 250 RDFRHKGRKEKCRGSGVYASLFGVGAPEALVIGVVALLVFG 372
           +     GR+ +C+G  VYASLFGVGAPEALVIGVVALLVFG
Sbjct: 72  QKSLKIGRRGRCKGKVVYASLFGVGAPEALVIGVVALLVFG 112


>ref|XP_002321929.1| predicted protein [Populus trichocarpa] gi|222868925|gb|EEF06056.1|
           predicted protein [Populus trichocarpa]
          Length = 259

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 34/49 (69%), Positives = 38/49 (77%)
 Frame = +1

Query: 226 KHLRISFRRDFRHKGRKEKCRGSGVYASLFGVGAPEALVIGVVALLVFG 372
           KHL IS    F  K RK +C+G  ++ASLFGVGAPEALVIGVVALLVFG
Sbjct: 62  KHLDISTPPRFIRKERKRRCKGKVIHASLFGVGAPEALVIGVVALLVFG 110


>gb|ABK94883.1| unknown [Populus trichocarpa]
          Length = 259

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 34/49 (69%), Positives = 38/49 (77%)
 Frame = +1

Query: 226 KHLRISFRRDFRHKGRKEKCRGSGVYASLFGVGAPEALVIGVVALLVFG 372
           KHL IS    F  K RK +C+G  ++ASLFGVGAPEALVIGVVALLVFG
Sbjct: 62  KHLDISTPPRFIRKERKRRCKGKVIHASLFGVGAPEALVIGVVALLVFG 110


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