BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00008713
         (634 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA98288.2| pentatricopeptide, putative [Oryza sativa Japonic...   120   9e-31
gb|EEC69305.1| hypothetical protein OsI_38371 [Oryza sativa Indi...   120   9e-31
ref|XP_003575504.1| PREDICTED: pentatricopeptide repeat-containi...   120   2e-30
ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containi...   117   3e-29
ref|XP_003628741.1| Pentatricopeptide repeat-containing protein ...   109   1e-28

>gb|ABA98288.2| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 572

 Score =  120 bits (302), Expect(2) = 9e-31
 Identities = 71/179 (39%), Positives = 106/179 (59%), Gaps = 9/179 (5%)
 Frame = -3

Query: 629 ASCASLRALKQIHAHMFLNGLHDDNYVAVQLLSFCSRELKEVVYARMIFNSL-AHSANVF 453
           A+  +  A +Q+HAH+ + GL      AV L++  S       +AR +F+S+ A SANV+
Sbjct: 19  ATSPAAAAARQLHAHLLIRGLPLPARAAVALVASSSSPR----HARAVFDSVPAASANVY 74

Query: 452 LWTAMITSYSNHQTGTMR-------EAFTIYKLMQQQGPSPNKFTLSSVLKACSSLQAVA 294
           LWTA I++Y+ H + +         EA  ++ LM   GP PN FT++SV+K CS ++AV 
Sbjct: 75  LWTATISAYARHASSSSSHALEVAGEAVALFALMLWSGPRPNAFTVTSVIKCCSKVRAVH 134

Query: 293 EGNQIHAHAFKLGF-LSSIYVQTALLDMYAKHGQVQKARNIFGDLSGENVVACNAMISC 120
           EG Q+HA   K G   SS++V  ALLD+Y   G V  AR +F ++  +NVV  N M++C
Sbjct: 135 EGLQVHAFLAKAGLGCSSVHVGAALLDLYGNIGLVGDARRVFDEMPVKNVVVGNTMVAC 193



 Score = 38.5 bits (88), Expect(2) = 9e-31
 Identities = 18/33 (54%), Positives = 24/33 (72%)
 Frame = -2

Query: 99  SGNMLAARELFHLMSERGINSWNALVAGYTHNG 1
           +G+M AARE+F  M+ER   SWN L++GY H G
Sbjct: 197 AGDMGAAREVFDGMAERDPISWNTLMSGYLHLG 229



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 35/135 (25%), Positives = 70/135 (51%)
 Frame = -3

Query: 515 LKEVVYARMIFNSLAHSANVFLWTAMITSYSNHQTGTMREAFTIYKLMQQQGPSPNKFTL 336
           L +    R +F+ +    NV  W  MI + S  + G++ +   ++  M+  G  P+  T+
Sbjct: 228 LGDTATVRELFDEMT-VRNVNSWNTMIAACS--EEGSLADTVKVFNRMRATGFEPDAATM 284

Query: 335 SSVLKACSSLQAVAEGNQIHAHAFKLGFLSSIYVQTALLDMYAKHGQVQKARNIFGDLSG 156
           + ++ AC+ L ++    Q+H    K     + +VQ +L+DMYAK G + +A+ +F +   
Sbjct: 285 AVLMSACAQLGSLTIAGQVHGLLQKSCVEMNCHVQNSLIDMYAKCGCISQAQFLFTETYP 344

Query: 155 ENVVACNAMISCYTK 111
           ++ V+ N MI  + +
Sbjct: 345 KDTVSYNVMIIAFAQ 359


>gb|EEC69305.1| hypothetical protein OsI_38371 [Oryza sativa Indica Group]
          Length = 560

 Score =  120 bits (302), Expect(2) = 9e-31
 Identities = 71/179 (39%), Positives = 106/179 (59%), Gaps = 9/179 (5%)
 Frame = -3

Query: 629 ASCASLRALKQIHAHMFLNGLHDDNYVAVQLLSFCSRELKEVVYARMIFNSL-AHSANVF 453
           A+  +  A +Q+HAH+ + GL      AV L++  S       +AR +F+S+ A SANV+
Sbjct: 19  ATSPAAAAARQLHAHLLIRGLPLPARAAVALVASSSSPR----HARAVFDSVPAASANVY 74

Query: 452 LWTAMITSYSNHQTGTMR-------EAFTIYKLMQQQGPSPNKFTLSSVLKACSSLQAVA 294
           LWTA I++Y+ H + +         EA  ++ LM   GP PN FT++SV+K CS ++AV 
Sbjct: 75  LWTATISAYARHTSSSSSHALEVAGEAVALFALMLWSGPRPNAFTVTSVIKCCSKVRAVH 134

Query: 293 EGNQIHAHAFKLGF-LSSIYVQTALLDMYAKHGQVQKARNIFGDLSGENVVACNAMISC 120
           EG Q+HA   K G   SS++V  ALLD+Y   G V  AR +F ++  +NVV  N M++C
Sbjct: 135 EGLQVHAFLAKAGLGCSSVHVGAALLDLYGNIGLVGDARRVFDEMPVKNVVVGNTMVAC 193



 Score = 38.5 bits (88), Expect(2) = 9e-31
 Identities = 18/33 (54%), Positives = 24/33 (72%)
 Frame = -2

Query: 99  SGNMLAARELFHLMSERGINSWNALVAGYTHNG 1
           +G+M AARE+F  M+ER   SWN L++GY H G
Sbjct: 197 AGDMGAAREVFDGMAERDPISWNTLMSGYLHLG 229



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 35/135 (25%), Positives = 70/135 (51%)
 Frame = -3

Query: 515 LKEVVYARMIFNSLAHSANVFLWTAMITSYSNHQTGTMREAFTIYKLMQQQGPSPNKFTL 336
           L +    R +F+ +    NV  W  MI + S  + G++ +   ++  M+  G  P+  T+
Sbjct: 228 LGDTATVRELFDEMT-VRNVNSWNTMIAACS--EEGSLADTVKVFNRMRATGFEPDAATM 284

Query: 335 SSVLKACSSLQAVAEGNQIHAHAFKLGFLSSIYVQTALLDMYAKHGQVQKARNIFGDLSG 156
           + ++ AC+ L ++    Q+H    K     + +VQ +L+DMYAK G + +A+ +F +   
Sbjct: 285 AVLMSACAQLGSLTIAGQVHGLLQKSCVEMNCHVQNSLIDMYAKCGCISQAQFLFTETYP 344

Query: 155 ENVVACNAMISCYTK 111
           ++ V+ N MI  + +
Sbjct: 345 KDTVSYNVMIIAFAQ 359


>ref|XP_003575504.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Brachypodium distachyon]
          Length = 548

 Score =  120 bits (301), Expect(2) = 2e-30
 Identities = 71/168 (42%), Positives = 100/168 (59%), Gaps = 2/168 (1%)
 Frame = -3

Query: 608 ALKQIHAHMFLNGLHDDNYVAVQLLSFCSRELKEVVYARMIFNSL-AHSANVFLWTAMIT 432
           A +Q+HA + L GL      AV L++  S       YAR IF+S+ A SANV+LWTA ++
Sbjct: 23  AARQLHAQLLLRGLPLPARAAVTLIASSSSPQ----YARAIFDSVPAASANVYLWTATVS 78

Query: 431 SYSNHQTGTMR-EAFTIYKLMQQQGPSPNKFTLSSVLKACSSLQAVAEGNQIHAHAFKLG 255
           SY+ H +  +  EAF ++  M + GP PN FT+SSVLK+ S L+A  +  Q+H    K G
Sbjct: 79  SYAKHASPALAAEAFPLFMFMLRSGPRPNGFTVSSVLKSLSKLRAAHQVCQVHGFLVKAG 138

Query: 254 FLSSIYVQTALLDMYAKHGQVQKARNIFGDLSGENVVACNAMISCYTK 111
             SS++V   LLD Y    +V+ AR +F ++   NVV  NAM+S Y K
Sbjct: 139 LASSLHVGATLLDSYGNLCRVKDARRVFDEMPRSNVVVGNAMVSGYVK 186



 Score = 37.7 bits (86), Expect(2) = 2e-30
 Identities = 17/37 (45%), Positives = 24/37 (64%)
 Frame = -2

Query: 111 GYAGSGNMLAARELFHLMSERGINSWNALVAGYTHNG 1
           GY  +G++ AAR++F  M ER   SWN L++GY   G
Sbjct: 183 GYVKAGDVEAARQVFDGMVERDSISWNTLMSGYLRRG 219


>ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
           gi|449529868|ref|XP_004171920.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 734

 Score =  117 bits (292), Expect(2) = 3e-29
 Identities = 59/173 (34%), Positives = 100/173 (57%), Gaps = 1/173 (0%)
 Frame = -3

Query: 632 LASCASLRALKQIHAHMFLNGLHDDNYVAVQLLSFCSRELK-EVVYARMIFNSLAHSANV 456
           L+ C S+R  KQIHAH+   GLH+  +   +L+ F +     ++ YA  +FNS+    N+
Sbjct: 36  LSKCQSIRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSI-EEPNL 94

Query: 455 FLWTAMITSYSNHQTGTMREAFTIYKLMQQQGPSPNKFTLSSVLKACSSLQAVAEGNQIH 276
           F+W +MI   S   +  +  A   +  M   G  PN +T   +LK+C+ L +  EG QIH
Sbjct: 95  FIWNSMIRGLSMSLSPAL--ALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIH 152

Query: 275 AHAFKLGFLSSIYVQTALLDMYAKHGQVQKARNIFGDLSGENVVACNAMISCY 117
           AH  KLGF+S +++ T+L++MYA+ G++  A+ +F   +  + ++  A+I+ Y
Sbjct: 153 AHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGY 205



 Score = 37.4 bits (85), Expect(2) = 3e-29
 Identities = 18/37 (48%), Positives = 23/37 (62%)
 Frame = -2

Query: 111 GYAGSGNMLAARELFHLMSERGINSWNALVAGYTHNG 1
           GYA  G M  AR+LF  M  + + SWNA++AGY   G
Sbjct: 204 GYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMG 240



 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 60/206 (29%), Positives = 102/206 (49%), Gaps = 33/206 (16%)
 Frame = -3

Query: 632 LASCASLRAL---KQIHAHMFLNGLHDDNYVAVQLLSFCSRELKEVVYARMIFN------ 480
           L SCA L +    KQIHAH+   G   D ++   L++  ++   E+  A+++F+      
Sbjct: 136 LKSCAKLASAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQS-GEMNNAQLVFDQSNFRD 194

Query: 479 SLAHSA------------------------NVFLWTAMITSYSNHQTGTMREAFTIYKLM 372
           +++ +A                        +V  W AMI  Y+  Q G  +EA  +++ M
Sbjct: 195 AISFTALIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYA--QMGRSKEALLLFEDM 252

Query: 371 QQQGPSPNKFTLSSVLKACSSLQAVAEGNQIHAHAFKLGFLSSIYVQTALLDMYAKHGQV 192
           ++    PN+ T+ SVL AC+   A+  GN + +     G  S++ +  AL+DMY+K G +
Sbjct: 253 RKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDL 312

Query: 191 QKARNIFGDLSGENVVACNAMISCYT 114
           Q AR +F D+   +V++ N MI  YT
Sbjct: 313 QTARELFDDMLERDVISWNVMIGGYT 338



 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 39/124 (31%), Positives = 67/124 (54%)
 Frame = -3

Query: 497 ARMIFNSLAHSANVFLWTAMITSYSNHQTGTMREAFTIYKLMQQQGPSPNKFTLSSVLKA 318
           AR +F+ +    +V  W  MI  Y++    + +EA  +++ M   G  P + T  S+L +
Sbjct: 315 ARELFDDMLER-DVISWNVMIGGYTH--MCSYKEALALFREMLASGVEPTEITFLSILPS 371

Query: 317 CSSLQAVAEGNQIHAHAFKLGFLSSIYVQTALLDMYAKHGQVQKARNIFGDLSGENVVAC 138
           C+ L A+  G  IHA+  K     S  + T+L+D+YAK G +  AR +F  +  +++ + 
Sbjct: 372 CAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASW 431

Query: 137 NAMI 126
           NAMI
Sbjct: 432 NAMI 435


>ref|XP_003628741.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355522763|gb|AET03217.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 758

 Score =  109 bits (272), Expect(2) = 1e-28
 Identities = 60/172 (34%), Positives = 95/172 (55%)
 Frame = -3

Query: 632 LASCASLRALKQIHAHMFLNGLHDDNYVAVQLLSFCSRELKEVVYARMIFNSLAHSANVF 453
           L SC +   L QI A +  +GL  +++VA   ++ CSR  K + +AR +F+ +    N  
Sbjct: 19  LRSCKNYERLHQIQAQIVTHGLEHNDFVAPNFITTCSR-FKRIHHARKLFDKIPQP-NTA 76

Query: 452 LWTAMITSYSNHQTGTMREAFTIYKLMQQQGPSPNKFTLSSVLKACSSLQAVAEGNQIHA 273
            W AM   Y   Q G  R+   ++  + +    PN FT   ++K+C  L+ V EG ++H 
Sbjct: 77  TWNAMFRGYL--QNGHHRDTVVLFGELNRIAGMPNCFTFPMIIKSCGKLEGVREGEEVHC 134

Query: 272 HAFKLGFLSSIYVQTALLDMYAKHGQVQKARNIFGDLSGENVVACNAMISCY 117
            A K GF S+ +V T+L+DMY+K G V+ A  +FG++   NVV   A+I+ Y
Sbjct: 135 CATKHGFKSNSFVATSLIDMYSKKGCVEDAYKVFGEMHERNVVVWTAIINGY 186



 Score = 43.1 bits (100), Expect(2) = 1e-28
 Identities = 21/37 (56%), Positives = 23/37 (62%)
 Frame = -2

Query: 111 GYAGSGNMLAARELFHLMSERGINSWNALVAGYTHNG 1
           GY  S NM AARELF  M  R   SWNA++ GY  NG
Sbjct: 216 GYIESKNMAAARELFDKMPNRDTMSWNAMLNGYAVNG 252



 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 43/130 (33%), Positives = 70/130 (53%), Gaps = 1/130 (0%)
 Frame = -3

Query: 509 EVVYARMIFNSLAHSANVFLWTAMITSYSNHQTGTMREAFTIYKLMQQQGPS-PNKFTLS 333
           EV     +F+ +    NVF W  +I  Y  +  G   E    +K M  +G   PN FTL 
Sbjct: 253 EVEMFEKVFDEMPER-NVFSWNGLIGGYVKN--GLFSETLESFKRMLVEGHVIPNDFTLV 309

Query: 332 SVLKACSSLQAVAEGNQIHAHAFKLGFLSSIYVQTALLDMYAKHGQVQKARNIFGDLSGE 153
           +VL ACS L A+  G  +H +A  +G+  +++V   L+DMYAK G ++ A  +F  L  +
Sbjct: 310 AVLSACSRLGALDMGKWVHVYAESIGYKGNLFVGNVLIDMYAKCGVIENAVVVFNCLDRK 369

Query: 152 NVVACNAMIS 123
           ++++ N +I+
Sbjct: 370 DIISWNTIIN 379