BLASTX nr result

ID: Dioscorea21_contig00008712 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00008712
         (681 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABG24204.1| putative transport protein [Gymnadenia conopsea]        96   5e-18
ref|XP_003597194.1| Protein transport protein Sec61 beta subunit...    94   3e-17
ref|XP_003538051.1| PREDICTED: protein transport protein Sec61 s...    94   3e-17
gb|ABK25751.1| unknown [Picea sitchensis] gi|116791539|gb|ABK260...    92   7e-17
ref|XP_002276029.1| PREDICTED: protein transport protein Sec61 s...    92   1e-16

>gb|ABG24204.1| putative transport protein [Gymnadenia conopsea]
          Length = 107

 Score = 96.3 bits (238), Expect = 5e-18
 Identities = 45/46 (97%), Positives = 46/46 (100%)
 Frame = -1

Query: 402 NMLRFYTDDAPGLKMSPTVVLVMSLCFIGFVTALHVFGKLYRYRSG 265
           NMLRFYTDDAPGLKMSPTVVLVMSLCFIGFVTALHVFGKLYRY+SG
Sbjct: 60  NMLRFYTDDAPGLKMSPTVVLVMSLCFIGFVTALHVFGKLYRYKSG 105


>ref|XP_003597194.1| Protein transport protein Sec61 beta subunit [Medicago truncatula]
           gi|87241202|gb|ABD33060.1| Sec61beta [Medicago
           truncatula] gi|355486242|gb|AES67445.1| Protein
           transport protein Sec61 beta subunit [Medicago
           truncatula]
          Length = 107

 Score = 93.6 bits (231), Expect = 3e-17
 Identities = 43/46 (93%), Positives = 46/46 (100%)
 Frame = -1

Query: 402 NMLRFYTDDAPGLKMSPTVVLVMSLCFIGFVTALHVFGKLYRYRSG 265
           NMLRFYTDDAPGLK+SPTVVLVMSLCFIGFVTALHVFGKLYRY++G
Sbjct: 59  NMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTALHVFGKLYRYKAG 104


>ref|XP_003538051.1| PREDICTED: protein transport protein Sec61 subunit beta-like
           [Glycine max]
          Length = 107

 Score = 93.6 bits (231), Expect = 3e-17
 Identities = 44/45 (97%), Positives = 45/45 (100%)
 Frame = -1

Query: 402 NMLRFYTDDAPGLKMSPTVVLVMSLCFIGFVTALHVFGKLYRYRS 268
           NMLRFYTDDAPGLK+SPTVVLVMSLCFIGFVTALHVFGKLYRYRS
Sbjct: 58  NMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTALHVFGKLYRYRS 102


>gb|ABK25751.1| unknown [Picea sitchensis] gi|116791539|gb|ABK26018.1| unknown
           [Picea sitchensis] gi|224286463|gb|ACN40938.1| unknown
           [Picea sitchensis]
          Length = 108

 Score = 92.4 bits (228), Expect = 7e-17
 Identities = 43/46 (93%), Positives = 45/46 (97%)
 Frame = -1

Query: 402 NMLRFYTDDAPGLKMSPTVVLVMSLCFIGFVTALHVFGKLYRYRSG 265
           NMLRFYTDDAPGLK++PTVVLVMSLCFIGFVTALHV GKLYRYRSG
Sbjct: 61  NMLRFYTDDAPGLKITPTVVLVMSLCFIGFVTALHVIGKLYRYRSG 106


>ref|XP_002276029.1| PREDICTED: protein transport protein Sec61 subunit beta [Vitis
           vinifera] gi|147800942|emb|CAN75561.1| hypothetical
           protein VITISV_032577 [Vitis vinifera]
          Length = 108

 Score = 92.0 bits (227), Expect = 1e-16
 Identities = 42/46 (91%), Positives = 46/46 (100%)
 Frame = -1

Query: 402 NMLRFYTDDAPGLKMSPTVVLVMSLCFIGFVTALHVFGKLYRYRSG 265
           NMLRFYTDDAPGLK++PTVVLVMSLCFIGFVTALHVFGK+YR+RSG
Sbjct: 60  NMLRFYTDDAPGLKITPTVVLVMSLCFIGFVTALHVFGKIYRHRSG 105


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