BLASTX nr result

ID: Dioscorea21_contig00008708 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00008708
         (1556 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16283.3| unnamed protein product [Vitis vinifera]              578   e-162
ref|XP_002284994.1| PREDICTED: general transcription factor IIH ...   578   e-162
emb|CAE04735.1| OSJNBa0043L24.23 [Oryza sativa Japonica Group] g...   572   e-160
ref|XP_003554116.1| PREDICTED: general transcription factor IIH ...   567   e-159
ref|XP_002448148.1| hypothetical protein SORBIDRAFT_06g022140 [S...   567   e-159

>emb|CBI16283.3| unnamed protein product [Vitis vinifera]
          Length = 494

 Score =  578 bits (1489), Expect = e-162
 Identities = 279/391 (71%), Positives = 317/391 (81%)
 Frame = -1

Query: 1517 MEAWERAYADERSWESLQEDESGLLRPLDTASILHAHYXXXXXXXXXXXXXXRIQKGLIR 1338
            ++AWERAYADERSWESLQEDESGLLRP+D  +I HA Y              RIQKGLIR
Sbjct: 97   LDAWERAYADERSWESLQEDESGLLRPIDNKTIYHAQYRRRIRSLYSSTTTARIQKGLIR 156

Query: 1337 YLYLVIDLSRAASETDYRPSRMAVVLKGAETFIREFFDQNPLSHIGLVIIKDGVAQRLTD 1158
            YLY+V+DLSRAASE D++PSRMAVV K  E FIREFFDQNPLS IGLV IKDG+AQ LTD
Sbjct: 157  YLYIVVDLSRAASEMDFKPSRMAVVAKHIEAFIREFFDQNPLSQIGLVTIKDGLAQCLTD 216

Query: 1157 LGGTPDSQIKALMAKRECSGDASLQNALELVRDYLGQVPSYGHREVLILYSSLNTCDPRD 978
            LGG+PDS +KALM K ECSGD+SLQNAL+LV  YL Q+PSYGHREVLILYS+L+TCDP D
Sbjct: 217  LGGSPDSHVKALMGKLECSGDSSLQNALDLVHGYLNQIPSYGHREVLILYSALSTCDPGD 276

Query: 977  IMETIEKCKKDKIRCSVVGLSAEIYICKYICEETGGSYTVALDESHFKXXXXXXXXXXXX 798
            IMETI++CKK KIRCSV+GLSAEI+IC+++C+ETGGSY+VALDESHFK            
Sbjct: 277  IMETIQECKKSKIRCSVIGLSAEIFICRHLCQETGGSYSVALDESHFKELLLEHAPPPPA 336

Query: 797  XXXXXXANLIKMGFPQRGADGVIAICSCHKEAKVGGGYTCPRCKARVCELPTECRLCGLT 618
                  ANLIKMGFPQR A+GVI+ICSCHKEAKVGGGYTCPRCKARVCELPTECR+CGLT
Sbjct: 337  IAEFAIANLIKMGFPQRAAEGVISICSCHKEAKVGGGYTCPRCKARVCELPTECRICGLT 396

Query: 617  LVSSPHLARSYHHLFPVTPFNEVTSMPLNKTLRKTPHACFGCQQSLGNQGSNSVLYVSCG 438
            LVSSPHLARSYHHLFP+ PF+EV+   LN   +++  ACFGCQ+SL   G+   L V+C 
Sbjct: 397  LVSSPHLARSYHHLFPIPPFDEVSLSLLNNPHQRSSRACFGCQESLLIPGNKPTLCVACP 456

Query: 437  KCNQLFCLDCDIYIHESLHNCPGCESQRESR 345
            KC Q FCLDCDIYIHESLHNCPGCES R S+
Sbjct: 457  KCKQHFCLDCDIYIHESLHNCPGCESFRHSK 487


>ref|XP_002284994.1| PREDICTED: general transcription factor IIH subunit 2 [Vitis
            vinifera]
          Length = 433

 Score =  578 bits (1489), Expect = e-162
 Identities = 279/391 (71%), Positives = 317/391 (81%)
 Frame = -1

Query: 1517 MEAWERAYADERSWESLQEDESGLLRPLDTASILHAHYXXXXXXXXXXXXXXRIQKGLIR 1338
            ++AWERAYADERSWESLQEDESGLLRP+D  +I HA Y              RIQKGLIR
Sbjct: 36   LDAWERAYADERSWESLQEDESGLLRPIDNKTIYHAQYRRRIRSLYSSTTTARIQKGLIR 95

Query: 1337 YLYLVIDLSRAASETDYRPSRMAVVLKGAETFIREFFDQNPLSHIGLVIIKDGVAQRLTD 1158
            YLY+V+DLSRAASE D++PSRMAVV K  E FIREFFDQNPLS IGLV IKDG+AQ LTD
Sbjct: 96   YLYIVVDLSRAASEMDFKPSRMAVVAKHIEAFIREFFDQNPLSQIGLVTIKDGLAQCLTD 155

Query: 1157 LGGTPDSQIKALMAKRECSGDASLQNALELVRDYLGQVPSYGHREVLILYSSLNTCDPRD 978
            LGG+PDS +KALM K ECSGD+SLQNAL+LV  YL Q+PSYGHREVLILYS+L+TCDP D
Sbjct: 156  LGGSPDSHVKALMGKLECSGDSSLQNALDLVHGYLNQIPSYGHREVLILYSALSTCDPGD 215

Query: 977  IMETIEKCKKDKIRCSVVGLSAEIYICKYICEETGGSYTVALDESHFKXXXXXXXXXXXX 798
            IMETI++CKK KIRCSV+GLSAEI+IC+++C+ETGGSY+VALDESHFK            
Sbjct: 216  IMETIQECKKSKIRCSVIGLSAEIFICRHLCQETGGSYSVALDESHFKELLLEHAPPPPA 275

Query: 797  XXXXXXANLIKMGFPQRGADGVIAICSCHKEAKVGGGYTCPRCKARVCELPTECRLCGLT 618
                  ANLIKMGFPQR A+GVI+ICSCHKEAKVGGGYTCPRCKARVCELPTECR+CGLT
Sbjct: 276  IAEFAIANLIKMGFPQRAAEGVISICSCHKEAKVGGGYTCPRCKARVCELPTECRICGLT 335

Query: 617  LVSSPHLARSYHHLFPVTPFNEVTSMPLNKTLRKTPHACFGCQQSLGNQGSNSVLYVSCG 438
            LVSSPHLARSYHHLFP+ PF+EV+   LN   +++  ACFGCQ+SL   G+   L V+C 
Sbjct: 336  LVSSPHLARSYHHLFPIPPFDEVSLSLLNNPHQRSSRACFGCQESLLIPGNKPTLCVACP 395

Query: 437  KCNQLFCLDCDIYIHESLHNCPGCESQRESR 345
            KC Q FCLDCDIYIHESLHNCPGCES R S+
Sbjct: 396  KCKQHFCLDCDIYIHESLHNCPGCESFRHSK 426


>emb|CAE04735.1| OSJNBa0043L24.23 [Oryza sativa Japonica Group]
            gi|116310777|emb|CAH67570.1| OSIGBa0101P20.13 [Oryza
            sativa Indica Group]
          Length = 432

 Score =  572 bits (1473), Expect = e-160
 Identities = 278/392 (70%), Positives = 314/392 (80%), Gaps = 1/392 (0%)
 Frame = -1

Query: 1520 MMEAWERAYADERSWESLQEDESGLLRPLDTASILHAHYXXXXXXXXXXXXXXRIQKGLI 1341
            ++EAWERAYAD+RSWE+LQEDESGLLRP+DT +++HA Y              RIQKGLI
Sbjct: 40   VLEAWERAYADDRSWEALQEDESGLLRPIDTKTLVHAQYRRRLLLRSAASAAARIQKGLI 99

Query: 1340 RYLYLVIDLSRAASETDYRPSRMAVVLKGAETFIREFFDQNPLSHIGLVIIKDGVAQRLT 1161
            RYLY+VIDLSRAASE DYRPSRMAVV K AE FIREFFDQNPLSH+G+V +KDG++ RLT
Sbjct: 100  RYLYIVIDLSRAASEMDYRPSRMAVVAKYAEVFIREFFDQNPLSHVGIVTMKDGISHRLT 159

Query: 1160 DLGGTPDSQIKALMAKRECSGDASLQNALELVRDYLGQVPSYGHREVLILYSSLNTCDPR 981
            ++GG+P+SQIKALM K ECSG+ SLQNALELV  YL QVPSYGH+EVL LYS+LNTCDP 
Sbjct: 160  EIGGSPESQIKALMGKLECSGEPSLQNALELVHGYLDQVPSYGHKEVLFLYSALNTCDPG 219

Query: 980  DIMETIEKCKKDKIRCSVVGLSAEIYICKYICEETGGSYTVALDESHFKXXXXXXXXXXX 801
            DIMETI KCKK KIRCSV+GL+AEI+ICKY+CEETGGSYTVALDESHFK           
Sbjct: 220  DIMETIAKCKKSKIRCSVIGLAAEIFICKYLCEETGGSYTVALDESHFKELLLEHAPPPP 279

Query: 800  XXXXXXXANLIKMGFPQRGADGVIAICSCHKEAKVGG-GYTCPRCKARVCELPTECRLCG 624
                   ANLIKMGFPQRGA+ +I+ICSCHK+ K G  GY CPRCK  VCELPTECR CG
Sbjct: 280  AIAEYAAANLIKMGFPQRGAEDLISICSCHKKIKSGAEGYICPRCKVNVCELPTECRTCG 339

Query: 623  LTLVSSPHLARSYHHLFPVTPFNEVTSMPLNKTLRKTPHACFGCQQSLGNQGSNSVLYVS 444
            LTLVSSPHLARSYHHLFPV PF+EV+S+  N+  +K    C+GCQQS  N  S S L+V 
Sbjct: 340  LTLVSSPHLARSYHHLFPVQPFDEVSSVHPNRLGQKGGQKCYGCQQSFINPDSQSSLHVR 399

Query: 443  CGKCNQLFCLDCDIYIHESLHNCPGCESQRES 348
            C KCNQ FCLDCDIYIHESLHNCPGCESQR S
Sbjct: 400  CPKCNQHFCLDCDIYIHESLHNCPGCESQRSS 431


>ref|XP_003554116.1| PREDICTED: general transcription factor IIH subunit 2-like [Glycine
            max]
          Length = 420

 Score =  567 bits (1461), Expect = e-159
 Identities = 268/395 (67%), Positives = 314/395 (79%)
 Frame = -1

Query: 1517 MEAWERAYADERSWESLQEDESGLLRPLDTASILHAHYXXXXXXXXXXXXXXRIQKGLIR 1338
            +EAWER YA++RSWE+LQEDESGLLRP+DT +I HA Y              RIQKGLIR
Sbjct: 24   LEAWERTYAEDRSWEALQEDESGLLRPIDTTAIYHAQYRRRLRTLAATAATARIQKGLIR 83

Query: 1337 YLYLVIDLSRAASETDYRPSRMAVVLKGAETFIREFFDQNPLSHIGLVIIKDGVAQRLTD 1158
            YLY+V+DLS+AASE D+RPSRMAV+ K  E FIREFFDQNPLSH+GLV IKDG+A  +T+
Sbjct: 84   YLYIVVDLSKAASERDFRPSRMAVMGKQVEAFIREFFDQNPLSHVGLVTIKDGIAHCITE 143

Query: 1157 LGGTPDSQIKALMAKRECSGDASLQNALELVRDYLGQVPSYGHREVLILYSSLNTCDPRD 978
            LGG+P+S IKALM K ECSGDASLQNALELV  YL Q+PSYGHREVLILYS+L+TCDP D
Sbjct: 144  LGGSPESHIKALMGKLECSGDASLQNALELVLGYLNQIPSYGHREVLILYSALSTCDPGD 203

Query: 977  IMETIEKCKKDKIRCSVVGLSAEIYICKYICEETGGSYTVALDESHFKXXXXXXXXXXXX 798
            +METI+KCKK KIRCSV+GL+AE+++CK++C+ETGG+Y+VALDESHFK            
Sbjct: 204  LMETIQKCKKSKIRCSVIGLAAEMFVCKHLCQETGGTYSVALDESHFKELILEHAPPPPA 263

Query: 797  XXXXXXANLIKMGFPQRGADGVIAICSCHKEAKVGGGYTCPRCKARVCELPTECRLCGLT 618
                  ANLIKMGFPQR A+G +AIC+CH+EAK GGGYTCPRCK RVCELPTECR+CGLT
Sbjct: 264  IAEYATANLIKMGFPQRSAEGSVAICTCHEEAKTGGGYTCPRCKVRVCELPTECRVCGLT 323

Query: 617  LVSSPHLARSYHHLFPVTPFNEVTSMPLNKTLRKTPHACFGCQQSLGNQGSNSVLYVSCG 438
            L+SSPHLARSYHHLFP+  F+EVT    N +    P+ CFGCQQSL +QG+   L V C 
Sbjct: 324  LISSPHLARSYHHLFPIVMFDEVTPSSQNDSNHSFPNTCFGCQQSLLSQGNKPGLSVICP 383

Query: 437  KCNQLFCLDCDIYIHESLHNCPGCESQRESRSYDA 333
            KC Q FCLDCDIY+HESLHNCPGCES R S+S  A
Sbjct: 384  KCKQQFCLDCDIYVHESLHNCPGCESSRHSKSVTA 418


>ref|XP_002448148.1| hypothetical protein SORBIDRAFT_06g022140 [Sorghum bicolor]
            gi|241939331|gb|EES12476.1| hypothetical protein
            SORBIDRAFT_06g022140 [Sorghum bicolor]
          Length = 431

 Score =  567 bits (1461), Expect = e-159
 Identities = 279/390 (71%), Positives = 311/390 (79%), Gaps = 1/390 (0%)
 Frame = -1

Query: 1520 MMEAWERAYADERSWESLQEDESGLLRPLDTASILHAHYXXXXXXXXXXXXXXRIQKGLI 1341
            ++EAWERAYADERSWESLQEDESGLL P+DT +++H+ Y              RIQKGLI
Sbjct: 40   VLEAWERAYADERSWESLQEDESGLLHPIDTKALVHSQYRRRLLLRSAAAAAARIQKGLI 99

Query: 1340 RYLYLVIDLSRAASETDYRPSRMAVVLKGAETFIREFFDQNPLSHIGLVIIKDGVAQRLT 1161
            RYLY+VIDLSRAASE DYRPSRMAVV K AE FIREFFDQNPLSH+GLV IKDG+A RLT
Sbjct: 100  RYLYIVIDLSRAASEMDYRPSRMAVVAKHAEAFIREFFDQNPLSHVGLVTIKDGIAHRLT 159

Query: 1160 DLGGTPDSQIKALMAKRECSGDASLQNALELVRDYLGQVPSYGHREVLILYSSLNTCDPR 981
            ++GG+P+SQIKALM K ECSGD+SLQNALELV  YL QVPSYGH+EVLILYS+LNT DP 
Sbjct: 160  EIGGSPESQIKALMGKLECSGDSSLQNALELVHGYLDQVPSYGHKEVLILYSALNTFDPG 219

Query: 980  DIMETIEKCKKDKIRCSVVGLSAEIYICKYICEETGGSYTVALDESHFKXXXXXXXXXXX 801
            DIMETI KCKK KIRCSV+GL+AEI+ICK++CEETGGSYTVALDESHFK           
Sbjct: 220  DIMETITKCKKSKIRCSVIGLAAEIFICKHLCEETGGSYTVALDESHFKELLLEHAPPPP 279

Query: 800  XXXXXXXANLIKMGFPQRGADGVIAICSCHKEAKVGG-GYTCPRCKARVCELPTECRLCG 624
                   ANLIKMGFPQRGA+ +I+ICSCHK+ K G  GY CPRCK  VCELPTECR CG
Sbjct: 280  AIAEYAAANLIKMGFPQRGAEDLISICSCHKKIKSGAEGYICPRCKVNVCELPTECRTCG 339

Query: 623  LTLVSSPHLARSYHHLFPVTPFNEVTSMPLNKTLRKTPHACFGCQQSLGNQGSNSVLYVS 444
            LTLVSSPHLARSYHHLFPV PF+EVT +P    +++    CF CQQSL N    S L+V 
Sbjct: 340  LTLVSSPHLARSYHHLFPVAPFDEVTPVP--NRIQRGGQICFSCQQSLFNPDGQSNLHVR 397

Query: 443  CGKCNQLFCLDCDIYIHESLHNCPGCESQR 354
            C KCNQ FCLDCDIYIHESLHNCPGCESQR
Sbjct: 398  CPKCNQHFCLDCDIYIHESLHNCPGCESQR 427


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