BLASTX nr result

ID: Dioscorea21_contig00008678 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00008678
         (424 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002444768.1| hypothetical protein SORBIDRAFT_07g027680 [S...    61   1e-07
dbj|BAK00291.1| predicted protein [Hordeum vulgare subsp. vulgare]     56   3e-06

>ref|XP_002444768.1| hypothetical protein SORBIDRAFT_07g027680 [Sorghum bicolor]
           gi|241941118|gb|EES14263.1| hypothetical protein
           SORBIDRAFT_07g027680 [Sorghum bicolor]
          Length = 645

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 49/134 (36%), Positives = 71/134 (52%), Gaps = 7/134 (5%)
 Frame = +2

Query: 2   RTNKMRALP---KNSNPDPSSNLNAQVTEAAEADSTPKVEKKNTPNGGSSASLSKKRSAT 172
           RT K R  P   K +    + N +       EA   P  +KK   +GG  A ++KKR+A 
Sbjct: 495 RTTKTRGGPAVRKAAKAAAADNGSDSDAPPEEAKKQPAADKKGGGSGG--AGVAKKRNAV 552

Query: 173 SFLNRMKR--SSPSNG--TLLESLXXXXXXXXXXXXXXDQKKSGKGESRKEQSSKSGATA 340
           +FLNRMK+  S+PS    +LLE+L              +QKK+GKGE +KE +  SG+ +
Sbjct: 553 NFLNRMKQGGSAPSTERVSLLETLKLSAQA--------EQKKAGKGEGKKEPAGGSGSGS 604

Query: 341 KQTPEPSAPTKRSV 382
           K+TP    P +R+V
Sbjct: 605 KKTP----PGRRNV 614


>dbj|BAK00291.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 635

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 49/140 (35%), Positives = 74/140 (52%), Gaps = 13/140 (9%)
 Frame = +2

Query: 2   RTNKMRALPKNSNPDPSSNLNAQVTEAAEADSTPKVEK-----KNTPNGGSSASLS---- 154
           RTNK RA  +N+ P+  +    + +E+A A+ T K +K       + +GG  A+ +    
Sbjct: 478 RTNKGRAPVRNAAPNQKTG---KASESAAAERTKKSDKMVGSGSGSGSGGGKAAAAAGGV 534

Query: 155 -KKRSATSFLNRMKRSS-PSNG--TLLESLXXXXXXXXXXXXXXDQKKSGKGESRKEQSS 322
            KKR+A  FL RMK++S PS    +LLE+L              +QKK+ K + RKE  S
Sbjct: 535 IKKRNAVDFLKRMKQNSVPSTERVSLLETLKLSAT---------EQKKAAKADGRKEPGS 585

Query: 323 KSGATAKQTPEPSAPTKRSV 382
            SG + K T E ++  +RSV
Sbjct: 586 SSG-SKKATAETASGGRRSV 604


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