BLASTX nr result
ID: Dioscorea21_contig00008678
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00008678 (424 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002444768.1| hypothetical protein SORBIDRAFT_07g027680 [S... 61 1e-07 dbj|BAK00291.1| predicted protein [Hordeum vulgare subsp. vulgare] 56 3e-06 >ref|XP_002444768.1| hypothetical protein SORBIDRAFT_07g027680 [Sorghum bicolor] gi|241941118|gb|EES14263.1| hypothetical protein SORBIDRAFT_07g027680 [Sorghum bicolor] Length = 645 Score = 60.8 bits (146), Expect = 1e-07 Identities = 49/134 (36%), Positives = 71/134 (52%), Gaps = 7/134 (5%) Frame = +2 Query: 2 RTNKMRALP---KNSNPDPSSNLNAQVTEAAEADSTPKVEKKNTPNGGSSASLSKKRSAT 172 RT K R P K + + N + EA P +KK +GG A ++KKR+A Sbjct: 495 RTTKTRGGPAVRKAAKAAAADNGSDSDAPPEEAKKQPAADKKGGGSGG--AGVAKKRNAV 552 Query: 173 SFLNRMKR--SSPSNG--TLLESLXXXXXXXXXXXXXXDQKKSGKGESRKEQSSKSGATA 340 +FLNRMK+ S+PS +LLE+L +QKK+GKGE +KE + SG+ + Sbjct: 553 NFLNRMKQGGSAPSTERVSLLETLKLSAQA--------EQKKAGKGEGKKEPAGGSGSGS 604 Query: 341 KQTPEPSAPTKRSV 382 K+TP P +R+V Sbjct: 605 KKTP----PGRRNV 614 >dbj|BAK00291.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 635 Score = 55.8 bits (133), Expect = 3e-06 Identities = 49/140 (35%), Positives = 74/140 (52%), Gaps = 13/140 (9%) Frame = +2 Query: 2 RTNKMRALPKNSNPDPSSNLNAQVTEAAEADSTPKVEK-----KNTPNGGSSASLS---- 154 RTNK RA +N+ P+ + + +E+A A+ T K +K + +GG A+ + Sbjct: 478 RTNKGRAPVRNAAPNQKTG---KASESAAAERTKKSDKMVGSGSGSGSGGGKAAAAAGGV 534 Query: 155 -KKRSATSFLNRMKRSS-PSNG--TLLESLXXXXXXXXXXXXXXDQKKSGKGESRKEQSS 322 KKR+A FL RMK++S PS +LLE+L +QKK+ K + RKE S Sbjct: 535 IKKRNAVDFLKRMKQNSVPSTERVSLLETLKLSAT---------EQKKAAKADGRKEPGS 585 Query: 323 KSGATAKQTPEPSAPTKRSV 382 SG + K T E ++ +RSV Sbjct: 586 SSG-SKKATAETASGGRRSV 604