BLASTX nr result

ID: Dioscorea21_contig00008650 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00008650
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283752.1| PREDICTED: polypyrimidine tract-binding prot...   206   2e-51
ref|XP_002283748.1| PREDICTED: polypyrimidine tract-binding prot...   206   2e-51
ref|XP_002533124.1| polypyrimidine tract binding protein, putati...   206   2e-51
ref|NP_001061885.1| Os08g0436000 [Oryza sativa Japonica Group] g...   202   2e-50
gb|AFW62276.1| hypothetical protein ZEAMMB73_137441 [Zea mays]        202   2e-50

>ref|XP_002283752.1| PREDICTED: polypyrimidine tract-binding protein homolog 1 isoform 2
           [Vitis vinifera]
          Length = 420

 Score =  206 bits (523), Expect = 2e-51
 Identities = 100/107 (93%), Positives = 101/107 (94%)
 Frame = +1

Query: 1   PQFRYTQTPSKVLHLRNLPWECAEEELVELCKPFGRIVNTMCNVGANRNQAFVEFADLNQ 180
           PQFRYTQTPSKVLHLRNLPWEC EEELVELCKPFG+IVNT CNVGANRNQAFVEF DLNQ
Sbjct: 7   PQFRYTQTPSKVLHLRNLPWECTEEELVELCKPFGKIVNTKCNVGANRNQAFVEFLDLNQ 66

Query: 181 AISMVSYYASSSEPAQVRGKTVYIQYSNRQEIVNNKSSGDVVGNVLL 321
           AISMVSYYASSSEPAQVRGKTVYIQYSNR EIVNNKS GDV GNVLL
Sbjct: 67  AISMVSYYASSSEPAQVRGKTVYIQYSNRHEIVNNKSPGDVPGNVLL 113


>ref|XP_002283748.1| PREDICTED: polypyrimidine tract-binding protein homolog 1 isoform 1
           [Vitis vinifera] gi|296082938|emb|CBI22239.3| unnamed
           protein product [Vitis vinifera]
          Length = 449

 Score =  206 bits (523), Expect = 2e-51
 Identities = 100/107 (93%), Positives = 101/107 (94%)
 Frame = +1

Query: 1   PQFRYTQTPSKVLHLRNLPWECAEEELVELCKPFGRIVNTMCNVGANRNQAFVEFADLNQ 180
           PQFRYTQTPSKVLHLRNLPWEC EEELVELCKPFG+IVNT CNVGANRNQAFVEF DLNQ
Sbjct: 7   PQFRYTQTPSKVLHLRNLPWECTEEELVELCKPFGKIVNTKCNVGANRNQAFVEFLDLNQ 66

Query: 181 AISMVSYYASSSEPAQVRGKTVYIQYSNRQEIVNNKSSGDVVGNVLL 321
           AISMVSYYASSSEPAQVRGKTVYIQYSNR EIVNNKS GDV GNVLL
Sbjct: 67  AISMVSYYASSSEPAQVRGKTVYIQYSNRHEIVNNKSPGDVPGNVLL 113


>ref|XP_002533124.1| polypyrimidine tract binding protein, putative [Ricinus communis]
           gi|223527087|gb|EEF29269.1| polypyrimidine tract binding
           protein, putative [Ricinus communis]
          Length = 483

 Score =  206 bits (523), Expect = 2e-51
 Identities = 99/107 (92%), Positives = 101/107 (94%)
 Frame = +1

Query: 1   PQFRYTQTPSKVLHLRNLPWECAEEELVELCKPFGRIVNTMCNVGANRNQAFVEFADLNQ 180
           PQFRYTQTPSKVLHLRNLPWEC EEEL+ELCKPFG+IVNT CNVGANRNQAFVEFADLNQ
Sbjct: 7   PQFRYTQTPSKVLHLRNLPWECTEEELIELCKPFGKIVNTKCNVGANRNQAFVEFADLNQ 66

Query: 181 AISMVSYYASSSEPAQVRGKTVYIQYSNRQEIVNNKSSGDVVGNVLL 321
           AI MVSYYASSSEPAQVRGKTVYIQYSNR EIVNNKS GDV GNVLL
Sbjct: 67  AIQMVSYYASSSEPAQVRGKTVYIQYSNRHEIVNNKSPGDVPGNVLL 113


>ref|NP_001061885.1| Os08g0436000 [Oryza sativa Japonica Group]
           gi|42407521|dbj|BAD10638.1| putative polypyrimidine
           tract-binding protein homolog [Oryza sativa Japonica
           Group] gi|113623854|dbj|BAF23799.1| Os08g0436000 [Oryza
           sativa Japonica Group] gi|215695278|dbj|BAG90469.1|
           unnamed protein product [Oryza sativa Japonica Group]
           gi|222640621|gb|EEE68753.1| hypothetical protein
           OsJ_27445 [Oryza sativa Japonica Group]
          Length = 461

 Score =  202 bits (514), Expect = 2e-50
 Identities = 97/106 (91%), Positives = 100/106 (94%)
 Frame = +1

Query: 4   QFRYTQTPSKVLHLRNLPWECAEEELVELCKPFGRIVNTMCNVGANRNQAFVEFADLNQA 183
           QFRYTQTPSKVLHLRN+PWEC EEELVELCKPFGR+VNTMCNVGANRNQAFVEFAD NQA
Sbjct: 8   QFRYTQTPSKVLHLRNMPWECTEEELVELCKPFGRVVNTMCNVGANRNQAFVEFADQNQA 67

Query: 184 ISMVSYYASSSEPAQVRGKTVYIQYSNRQEIVNNKSSGDVVGNVLL 321
           ISMVSYYASSSEPAQVRGKTVYIQYSNRQEI NNK +GD  GNVLL
Sbjct: 68  ISMVSYYASSSEPAQVRGKTVYIQYSNRQEITNNKGTGDSSGNVLL 113


>gb|AFW62276.1| hypothetical protein ZEAMMB73_137441 [Zea mays]
          Length = 458

 Score =  202 bits (514), Expect = 2e-50
 Identities = 97/106 (91%), Positives = 100/106 (94%)
 Frame = +1

Query: 4   QFRYTQTPSKVLHLRNLPWECAEEELVELCKPFGRIVNTMCNVGANRNQAFVEFADLNQA 183
           QFRYTQTPSKVLHLRN+PWEC EEELVELCKPFGR+VNTMCNVGANRNQAFVEFAD NQA
Sbjct: 8   QFRYTQTPSKVLHLRNMPWECTEEELVELCKPFGRVVNTMCNVGANRNQAFVEFADQNQA 67

Query: 184 ISMVSYYASSSEPAQVRGKTVYIQYSNRQEIVNNKSSGDVVGNVLL 321
           ISMVSYYASSSEPAQVRGKTVYIQYSNRQEI NNK +GD  GNVLL
Sbjct: 68  ISMVSYYASSSEPAQVRGKTVYIQYSNRQEITNNKGTGDSSGNVLL 113


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