BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00008641
         (473 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004135653.1| PREDICTED: pentatricopeptide repeat-containi...   162   3e-38
ref|XP_002305798.1| predicted protein [Populus trichocarpa] gi|2...   160   1e-37
ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   159   3e-37
ref|XP_004155062.1| PREDICTED: pentatricopeptide repeat-containi...   158   4e-37
ref|XP_002456545.1| hypothetical protein SORBIDRAFT_03g038140 [S...   156   2e-36

>ref|XP_004135653.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g18970-like [Cucumis sativus]
           gi|449522917|ref|XP_004168472.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g18970-like [Cucumis sativus]
          Length = 318

 Score =  162 bits (410), Expect = 3e-38
 Identities = 75/153 (49%), Positives = 107/153 (69%)
 Frame = +1

Query: 1   GNLNYAQRVFDRMVDKNVITWTSMITGYSTHGLGHQAIEVLEQMMSNGFRPNEVTFVAIL 180
           G LN A  VF +M  KNV+TWTSM TG + HG G +A+E+L+ M ++G +PN VTF ++L
Sbjct: 102 GLLNSASSVFKQMKQKNVLTWTSMATGLAVHGRGKEALELLDAMGAHGVKPNAVTFTSLL 161

Query: 181 SACSHCGLVDEGLHYFSLMRNEYKIAPTSDHYSCVIDMLVRSGKLDEAWKLITELKEINE 360
           SAC H GL++EGLH F +M  ++ + P   HY C++D+L RSG L EA+KLI E+    E
Sbjct: 162 SACCHGGLIEEGLHLFRVMERKFGVVPQMQHYGCIVDLLGRSGHLREAYKLILEMP--ME 219

Query: 361 EDGDVWGAMLGGCELHGNVRIGSKVAKMMVERK 459
            DG +W ++L  C LHG+V +G +V K++VER+
Sbjct: 220 PDGVLWRSLLSSCMLHGDVEMGERVGKLLVERQ 252


>ref|XP_002305798.1| predicted protein [Populus trichocarpa] gi|222848762|gb|EEE86309.1|
           predicted protein [Populus trichocarpa]
          Length = 584

 Score =  160 bits (404), Expect = 1e-37
 Identities = 74/148 (50%), Positives = 106/148 (71%), Gaps = 1/148 (0%)
 Frame = +1

Query: 1   GNLNYAQRVFDRMVDKNVITWTSMITGYSTHGLGHQAIEVLEQMMSNGFRPNEVTFVAIL 180
           GN++ A+ VFD M ++NV+ WT+MI+GY T+G G QA+E+  +M  NG  PN +TFVA+L
Sbjct: 261 GNVSKAREVFDSMKERNVVAWTAMISGYGTNGYGSQAVELFHEMRRNGLLPNSITFVAVL 320

Query: 181 SACSHCGLVDEGLHYFSLMRNEYKIAPTSDHYSCVIDMLVRSGKLDEAWKLITELKEINE 360
           SAC+H GLV+EG   F  MR EY++ P  +H+ C++DML R+G LDEA+  I   KEI+E
Sbjct: 321 SACAHAGLVNEGRRVFESMREEYRLVPEVEHHVCLVDMLGRAGLLDEAYNFI---KEIHE 377

Query: 361 EDGD-VWGAMLGGCELHGNVRIGSKVAK 441
           E    +W AMLG C++H N  +G++VA+
Sbjct: 378 EPAPAIWTAMLGACKMHKNFGLGAQVAE 405



 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 53/158 (33%), Positives = 84/158 (53%), Gaps = 4/158 (2%)
 Frame = +1

Query: 1   GNLNYAQRVFDRMVDKNVITWTSMITGYSTHGLGHQAIEVLEQMMSNGFRPNEVTFVAIL 180
           G L  A++VFD+M D++V+TW SMI+GY  +G   +AI + ++M   G  PN  TFV++L
Sbjct: 160 GVLCNARKVFDKMRDRSVVTWNSMISGYEQNGFAKEAIRLFDRMKEIGVEPNSATFVSVL 219

Query: 181 SACSHCGLVDEGLHYFSLMRNEYKIAPTSDHY----SCVIDMLVRSGKLDEAWKLITELK 348
           SAC+H G    G        +EY +    D      + +I+M  R G + +A ++   +K
Sbjct: 220 SACAHLGAFILGCWV-----HEYAVGNGLDLNVVLGTSLINMYTRCGNVSKAREVFDSMK 274

Query: 349 EINEEDGDVWGAMLGGCELHGNVRIGSKVAKMMVERKR 462
           E N      W AM+ G   +G    GS+  ++  E +R
Sbjct: 275 ERNVV---AWTAMISG---YGTNGYGSQAVELFHEMRR 306


>ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g49170, chloroplastic-like [Cucumis sativus]
          Length = 849

 Score =  159 bits (401), Expect = 3e-37
 Identities = 72/157 (45%), Positives = 106/157 (67%)
 Frame = +1

Query: 1   GNLNYAQRVFDRMVDKNVITWTSMITGYSTHGLGHQAIEVLEQMMSNGFRPNEVTFVAIL 180
           GN+  A +VF+ M D+NVI+WTS+ITG++ HG   QA+E+  +M+  G RPNEVT++A+L
Sbjct: 526 GNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNEVTYIAVL 585

Query: 181 SACSHCGLVDEGLHYFSLMRNEYKIAPTSDHYSCVIDMLVRSGKLDEAWKLITELKEINE 360
           SACSH GLV+EG  +F  M  E+ + P  +HY+C++D+L RSG L EA + I  +    +
Sbjct: 586 SACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACIVDILGRSGSLSEAIQFINSMP--YK 643

Query: 361 EDGDVWGAMLGGCELHGNVRIGSKVAKMMVERKRQTP 471
            D  VW   LG C +HGN+ +G   AKM++E++   P
Sbjct: 644 ADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDP 680



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 41/124 (33%), Positives = 68/124 (54%), Gaps = 5/124 (4%)
 Frame = +1

Query: 1   GNLNYAQRVFDRMVDKNVITWTSMITGY-STHGLGHQAIEVLEQMMSNGFRPNEVTFVAI 177
           G++  A+++FD+++D NV +WT+MITGY    G   +A+++   M+     PN  TF + 
Sbjct: 323 GSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSST 382

Query: 178 LSACSHCGLVDEGLHYFSLMRNEYKIAPTSDHYSCV----IDMLVRSGKLDEAWKLITEL 345
           L AC++   +  G   F+   +  K+  +S   +CV    I M  RSG++D+A K    L
Sbjct: 383 LKACANLAALRIGEQVFT---HAVKLGFSS--VNCVANSLISMYARSGRIDDARKAFDIL 437

Query: 346 KEIN 357
            E N
Sbjct: 438 FEKN 441



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 39/137 (28%), Positives = 68/137 (49%), Gaps = 5/137 (3%)
 Frame = +1

Query: 1   GNLNYAQRVFDRMVDKNVITWTSMITGYSTHGLGHQAIEVLEQMMSNGFRPNEVTFVAIL 180
           G+L  A +VF++M ++N +TWT MIT     G   +AI++   M+ +G+ P+  T   ++
Sbjct: 219 GDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVI 278

Query: 181 SACSHCGLVDEGLHYFSLMRNEYKIAPTSDHY--SCVIDMLVR---SGKLDEAWKLITEL 345
           SAC++  L+  G    S      +   T D     C+I+M  +    G +  A K+  ++
Sbjct: 279 SACANMELLLLGQQLHS---QAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQI 335

Query: 346 KEINEEDGDVWGAMLGG 396
            + N      W AM+ G
Sbjct: 336 LDHNVFS---WTAMITG 349


>ref|XP_004155062.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g47530-like [Cucumis sativus]
          Length = 602

 Score =  158 bits (400), Expect = 4e-37
 Identities = 69/155 (44%), Positives = 105/155 (67%)
 Frame = +1

Query: 1   GNLNYAQRVFDRMVDKNVITWTSMITGYSTHGLGHQAIEVLEQMMSNGFRPNEVTFVAIL 180
           G ++ A  VFD+M +KNV++W++MI+G S +G G +AIE   +M  NG  P + TF A+L
Sbjct: 279 GRMDKAYEVFDKMTEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGVEPGDHTFTAVL 338

Query: 181 SACSHCGLVDEGLHYFSLMRNEYKIAPTSDHYSCVIDMLVRSGKLDEAWKLITELKEINE 360
           SACSHCGLVDEG+ +F  MR E+ IAP   HY C++D+L R+G LD+A++LI  ++    
Sbjct: 339 SACSHCGLVDEGMAFFDRMRQEFMIAPNVHHYGCIVDLLGRAGMLDQAYELIMSMEV--R 396

Query: 361 EDGDVWGAMLGGCELHGNVRIGSKVAKMMVERKRQ 465
            D  +W  +LG C +HG+  +G ++ + ++E K Q
Sbjct: 397 PDATMWRTLLGACRIHGHGNLGERIVEHLIELKSQ 431


>ref|XP_002456545.1| hypothetical protein SORBIDRAFT_03g038140 [Sorghum bicolor]
           gi|241928520|gb|EES01665.1| hypothetical protein
           SORBIDRAFT_03g038140 [Sorghum bicolor]
          Length = 640

 Score =  156 bits (394), Expect = 2e-36
 Identities = 70/151 (46%), Positives = 106/151 (70%)
 Frame = +1

Query: 1   GNLNYAQRVFDRMVDKNVITWTSMITGYSTHGLGHQAIEVLEQMMSNGFRPNEVTFVAIL 180
           G+L  AQ++FD M  K++++WT++ITG+  HG G  A+ + E+M+S G RP+ V  VA+ 
Sbjct: 315 GSLPRAQQLFDEMPRKSIVSWTALITGHGMHGNGDVAVSLFERMVSEGIRPDNVAMVALF 374

Query: 181 SACSHCGLVDEGLHYFSLMRNEYKIAPTSDHYSCVIDMLVRSGKLDEAWKLITELKEINE 360
           SACSH GL DEG  YFS M + YK+ PT +HY+C++D+L R+G+L+EA +LI+ +     
Sbjct: 375 SACSHAGLYDEGRRYFSAMESVYKLRPTLEHYTCMVDLLGRAGRLEEARELISSMP--MP 432

Query: 361 EDGDVWGAMLGGCELHGNVRIGSKVAKMMVE 453
            DG VWGA+LG C++H NV +G +    ++E
Sbjct: 433 ADGAVWGALLGACKIHKNVDVGEEAFTRVIE 463