BLASTX nr result

ID: Dioscorea21_contig00008594 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00008594
         (922 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283664.2| PREDICTED: ribosomal RNA small subunit methy...   273   5e-71
ref|XP_004152459.1| PREDICTED: ribosomal RNA small subunit methy...   272   9e-71
ref|XP_002318633.1| predicted protein [Populus trichocarpa] gi|2...   268   2e-69
ref|XP_003564019.1| PREDICTED: ribosomal RNA small subunit methy...   266   7e-69
ref|XP_003608919.1| Ribosomal RNA small subunit methyltransferas...   251   2e-64

>ref|XP_002283664.2| PREDICTED: ribosomal RNA small subunit methyltransferase G-like
           [Vitis vinifera] gi|297733841|emb|CBI15088.3| unnamed
           protein product [Vitis vinifera]
          Length = 285

 Score =  273 bits (697), Expect = 5e-71
 Identities = 147/250 (58%), Positives = 172/250 (68%)
 Frame = -1

Query: 814 ASSPSVPNKRTQTPILETLSSHKKEQISLYVGALLQWNQRMNLTAVTQVDEVLSRHVEDS 635
           A+      K   +   ETL+  +K+QISLYV ALLQWNQ+MNLTAVT+ DEV+ RHV DS
Sbjct: 38  ATKTLTTTKVLNSSYFETLNPLQKQQISLYVDALLQWNQKMNLTAVTKADEVMERHVGDS 97

Query: 634 LAIIPIMLRXXXXXXXXXXSCDGIDVIDVGSGAGLPGLILAIAYPSWKITLLESMHKRCL 455
           LA+IP +            SC+ I ++DVGSG GLPGLILAIA PSWKITLLESM+KRC+
Sbjct: 98  LAMIPPI--QSSYIAHCDSSCNNISLVDVGSGPGLPGLILAIACPSWKITLLESMNKRCI 155

Query: 454 FLEQAVSHIGLSNVQILHERAENVGQNAAFRERFDXXXXXXXXXXXXXXEYCIPLVRVGG 275
           FLE AVS  GLSNVQ++  RAEN+GQN  FRE FD              EYC+PLVRVGG
Sbjct: 156 FLEHAVSLTGLSNVQVVRGRAENLGQNIGFREVFDVAVARAVAEMRILAEYCLPLVRVGG 215

Query: 274 LFVAAKGYDPQEEVKNAEKAIHLMGAXXXXXXXXXXXSPHGQRTVVTCLKKRSTPRRYPR 95
           LF+AAKG+DPQEEV+NAE+AI LMGA           SP GQRT + CLK   TPR+YPR
Sbjct: 216 LFLAAKGHDPQEEVRNAERAIQLMGASVLQLCSVESHSPFGQRTAIVCLKDCPTPRKYPR 275

Query: 94  QPGTPSKIPL 65
            PGTP K PL
Sbjct: 276 DPGTPVKSPL 285


>ref|XP_004152459.1| PREDICTED: ribosomal RNA small subunit methyltransferase G-like
           [Cucumis sativus] gi|449527787|ref|XP_004170891.1|
           PREDICTED: ribosomal RNA small subunit methyltransferase
           G-like [Cucumis sativus]
          Length = 281

 Score =  272 bits (695), Expect = 9e-71
 Identities = 135/234 (57%), Positives = 170/234 (72%)
 Frame = -1

Query: 766 ETLSSHKKEQISLYVGALLQWNQRMNLTAVTQVDEVLSRHVEDSLAIIPIMLRXXXXXXX 587
           ETL+S +K+Q+ L+V ALLQWNQ+MNLTA+T+V+EV+ RHVEDSLAIIP  +R       
Sbjct: 49  ETLTSRQKDQVHLFVDALLQWNQKMNLTAITEVNEVMERHVEDSLAIIP-PIRNLYMSHC 107

Query: 586 XXXSCDGIDVIDVGSGAGLPGLILAIAYPSWKITLLESMHKRCLFLEQAVSHIGLSNVQI 407
               CD I ++DVG+GAGLPGLI+AIA P W++TL+ESM+KRCLFLE AV H GL+NVQ+
Sbjct: 108 STSPCDDIKLVDVGTGAGLPGLIIAIACPEWQVTLMESMNKRCLFLEHAVGHTGLTNVQV 167

Query: 406 LHERAENVGQNAAFRERFDXXXXXXXXXXXXXXEYCIPLVRVGGLFVAAKGYDPQEEVKN 227
           +  RAEN+G + + RE+FD              EYC+P+VRVGGLF+AAKG+DP  EV N
Sbjct: 168 VRGRAENLGHDLSLREKFDVVVARAVAEMRILAEYCLPMVRVGGLFLAAKGHDPLAEVTN 227

Query: 226 AEKAIHLMGAXXXXXXXXXXXSPHGQRTVVTCLKKRSTPRRYPRQPGTPSKIPL 65
           AEKAI +MGA           SP+GQRT V C K+R TPR+YPR PGTP+K PL
Sbjct: 228 AEKAIEMMGASLLQICPVESHSPYGQRTAVVCFKERHTPRKYPRDPGTPAKSPL 281


>ref|XP_002318633.1| predicted protein [Populus trichocarpa] gi|222859306|gb|EEE96853.1|
           predicted protein [Populus trichocarpa]
          Length = 288

 Score =  268 bits (684), Expect = 2e-69
 Identities = 138/254 (54%), Positives = 178/254 (70%)
 Frame = -1

Query: 826 SIASASSPSVPNKRTQTPILETLSSHKKEQISLYVGALLQWNQRMNLTAVTQVDEVLSRH 647
           S+ +A+S    N    +   ++ S  +K+QI LYV  LLQWNQ+MNLTAVT VDEV+ RH
Sbjct: 41  SLTAAASIGTHN----SSCFDSFSCRQKKQIRLYVDTLLQWNQKMNLTAVTDVDEVMERH 96

Query: 646 VEDSLAIIPIMLRXXXXXXXXXXSCDGIDVIDVGSGAGLPGLILAIAYPSWKITLLESMH 467
           +EDSLAI+P +            S D I ++DVG+GAGLPGL+LAIA P+WK+TLLESM+
Sbjct: 97  IEDSLAILPPI--QDSYVSHCNASIDSIKLVDVGTGAGLPGLVLAIACPAWKVTLLESMN 154

Query: 466 KRCLFLEQAVSHIGLSNVQILHERAENVGQNAAFRERFDXXXXXXXXXXXXXXEYCIPLV 287
           KRC FLE A+S  GLSNV+++  RAEN+GQN +FRE+FD              EYC+PLV
Sbjct: 155 KRCDFLEHAISVTGLSNVEVVRGRAENLGQNVSFREKFDVAVARAVAEMRILAEYCLPLV 214

Query: 286 RVGGLFVAAKGYDPQEEVKNAEKAIHLMGAXXXXXXXXXXXSPHGQRTVVTCLKKRSTPR 107
           RVGGLF+AAKG+DPQEEV+NAE+++ LMG+           SP+GQRT + C K R TPR
Sbjct: 215 RVGGLFIAAKGHDPQEEVRNAERSLKLMGSSTLQLCSVESRSPYGQRTAIICSKDRPTPR 274

Query: 106 RYPRQPGTPSKIPL 65
           +YPR PGTP+K+PL
Sbjct: 275 KYPRDPGTPAKLPL 288


>ref|XP_003564019.1| PREDICTED: ribosomal RNA small subunit methyltransferase G-like
           [Brachypodium distachyon]
          Length = 280

 Score =  266 bits (679), Expect = 7e-69
 Identities = 144/259 (55%), Positives = 171/259 (66%), Gaps = 1/259 (0%)
 Frame = -1

Query: 838 FRCLSIASASSPSVPNKRTQTPILETLSSHKKEQISLYVGALLQWNQRMNLTAVTQVDEV 659
           FR  S A+ASS + P           LS  ++ Q++LYV ALL WNQRMNLTAVT   EV
Sbjct: 33  FRATSSAAASSSATP-----------LSPAQQRQVTLYVDALLDWNQRMNLTAVTDEAEV 81

Query: 658 LSRHVEDSLAIIPIMLRXXXXXXXXXXS-CDGIDVIDVGSGAGLPGLILAIAYPSWKITL 482
           ++RHVEDSLA++P + R              GI +IDVGSGAGLPGLILA+A PSWKITL
Sbjct: 82  MTRHVEDSLAVLPPLERAYRAQSTSHGGDMGGISLIDVGSGAGLPGLILAVARPSWKITL 141

Query: 481 LESMHKRCLFLEQAVSHIGLSNVQILHERAENVGQNAAFRERFDXXXXXXXXXXXXXXEY 302
           LESM KRC FLE AV  + LSNV +L +RAENVGQ+  FRE FD              EY
Sbjct: 142 LESMRKRCTFLEHAVEVMELSNVDVLCDRAENVGQSHDFREAFDVAAARAVAELKILAEY 201

Query: 301 CIPLVRVGGLFVAAKGYDPQEEVKNAEKAIHLMGAXXXXXXXXXXXSPHGQRTVVTCLKK 122
           C+PLVRVGGLF+AAKG+DP +E++NA+ A+H +GA            PHGQRT V  LK+
Sbjct: 202 CLPLVRVGGLFIAAKGHDPHDEIRNAKAAVHTLGASMLDLCTVESMGPHGQRTAVVYLKE 261

Query: 121 RSTPRRYPRQPGTPSKIPL 65
           R TPRRYPR PGTPSK PL
Sbjct: 262 RGTPRRYPRHPGTPSKTPL 280


>ref|XP_003608919.1| Ribosomal RNA small subunit methyltransferase G [Medicago
           truncatula] gi|355509974|gb|AES91116.1| Ribosomal RNA
           small subunit methyltransferase G [Medicago truncatula]
          Length = 518

 Score =  251 bits (641), Expect = 2e-64
 Identities = 129/233 (55%), Positives = 163/233 (69%)
 Frame = -1

Query: 763 TLSSHKKEQISLYVGALLQWNQRMNLTAVTQVDEVLSRHVEDSLAIIPIMLRXXXXXXXX 584
           TL+S +K+QI LYV  LLQWN+RMNLTAV +V+EV+ RH+EDSLAI+P +          
Sbjct: 275 TLTSRQKDQIHLYVDTLLQWNKRMNLTAVKEVNEVMERHIEDSLAILPPL--SDNYMSHS 332

Query: 583 XXSCDGIDVIDVGSGAGLPGLILAIAYPSWKITLLESMHKRCLFLEQAVSHIGLSNVQIL 404
             S D + ++DVG+GAGLPG++LAIA P W +TL+ESM+KRC+FLE  V  IG SN+QI+
Sbjct: 333 SKSIDKVKLVDVGTGAGLPGVVLAIARPDWDVTLMESMNKRCVFLEHVVGVIGSSNLQIV 392

Query: 403 HERAENVGQNAAFRERFDXXXXXXXXXXXXXXEYCIPLVRVGGLFVAAKGYDPQEEVKNA 224
             RAE++GQN  +RE+FD              EYC+PLVRVGG+F+AAKG+DP++EVK A
Sbjct: 393 RGRAESLGQNLCYREKFDIAVARAVAETRVLAEYCLPLVRVGGMFIAAKGHDPEDEVKKA 452

Query: 223 EKAIHLMGAXXXXXXXXXXXSPHGQRTVVTCLKKRSTPRRYPRQPGTPSKIPL 65
           E AI  MGA           SP+GQRT V CLK R TP +YPR PGTPSK PL
Sbjct: 453 ENAIKKMGASLLQVCSVESQSPYGQRTAVICLKDRPTPMKYPRFPGTPSKEPL 505


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