BLASTX nr result

ID: Dioscorea21_contig00008592 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00008592
         (995 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61844.1| hypothetical protein VITISV_004819 [Vitis vinifera]   114   3e-23
ref|XP_002531306.1| conserved hypothetical protein [Ricinus comm...   114   5e-23
ref|XP_002280570.2| PREDICTED: uncharacterized protein LOC100263...   112   1e-22
ref|XP_002329292.1| predicted protein [Populus trichocarpa] gi|2...   103   5e-20
ref|XP_002305171.1| predicted protein [Populus trichocarpa] gi|2...   101   2e-19

>emb|CAN61844.1| hypothetical protein VITISV_004819 [Vitis vinifera]
          Length = 1101

 Score =  114 bits (286), Expect = 3e-23
 Identities = 125/377 (33%), Positives = 177/377 (46%), Gaps = 59/377 (15%)
 Frame = -2

Query: 961  MKTAGLVARLMGLETMPVVYQEKPRKALDSELYFDRDESW--DCSRLDQDLCTEMGGNGK 788
            M    LVARLMGLE+MP V + KPR A  SE+  DR+E +  + S  D++      G  K
Sbjct: 103  MGAPSLVARLMGLESMPSVQRSKPRTASISEICNDREEKFVNNHSGFDKEDLNLEKGITK 162

Query: 787  IDSRPQKIQKTGGFLEKQTVNASRFSSDAFRFNKSMLAGSKKQHH--KLPTPVKSPRTL- 617
             +SRPQK+QKT    E++ V   RF ++A +F K++L+ SKK HH  KL +P KSPR L 
Sbjct: 163  HESRPQKLQKT-ALTERRAV--GRFGAEALQF-KTILSRSKKHHHHPKLASPAKSPRILS 218

Query: 616  -PRRSTVRLMEAATKILDPGSHARNR---ALTYIGSA--RASGGVQGSNVGSLSRNVKDS 455
              R +T RL++AATKIL+P   A NR   A+TY  S      G V   N   LS +    
Sbjct: 219  GSRXNTSRLIDAATKILEPSLQATNRAKSAITYSNSILHPVKGEVMKENTTDLSLDPSKQ 278

Query: 454  V------------VGSCRSCGGLVEVPGLRLGEC------GSST----------SDFSNA 359
                           SC++CG  ++V  +R           SST          SD SNA
Sbjct: 279  FGYCASASKPLKGQSSCKNCGNFLDVVDVRSSVVEQAPVFASSTAHLASGPFQESDRSNA 338

Query: 358  SC---SDVGYEGIGI--KPLDKVASLVDQVKANAKNRASD-------NVEKKYNIVEVRE 215
                 S +  E I +  K  D+ ASL  Q K N + R+         + E K       +
Sbjct: 339  RLPIPSSIKPERIVVLKKIPDQHASLASQAKENMQARSEPFRDGKPISGEGKDQWHLASQ 398

Query: 214  QRKCEEDVIPKPGPKVKNLRQNPVPSIKGKVTGKQ-----DGRRYPNEVNR---SKDFVS 59
            Q K ++DV      +   L QN +   + +   +        RR  + VN    +KD++S
Sbjct: 399  QCKPQKDVSSPVAFRHSTLTQNQMSISRDRTPPRAKLNDLQSRRIASPVNAVSGAKDYIS 458

Query: 58   SSKNLNKTTVTRPAKVV 8
             +++L+  T  R A  V
Sbjct: 459  LNRSLSGHTRPRMAMKV 475


>ref|XP_002531306.1| conserved hypothetical protein [Ricinus communis]
           gi|223529097|gb|EEF31078.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 869

 Score =  114 bits (284), Expect = 5e-23
 Identities = 79/194 (40%), Positives = 113/194 (58%), Gaps = 11/194 (5%)
 Frame = -2

Query: 961 MKTAGLVARLMGLETMPVVYQEKPRKALDSELYFDRDESW---DCSRLDQDLCTEMGGNG 791
           M+ AGLVARLMGLE+MP V+++K +KA +S     + E++    C   D ++     G+ 
Sbjct: 103 MRAAGLVARLMGLESMPAVHRDKHKKASNSATCEVKKENFVDAQCGS-DVEVLKLDKGSS 161

Query: 790 KIDSRPQKIQKTGGFLEKQTVNASRFSSDAFRFNKSMLAGSKKQHHKLPTPVKSPRTLPR 611
           K++SRPQK+QKTG F E++ V  +RF ++A      +    K QH KL +PVKSPR    
Sbjct: 162 KVESRPQKLQKTGQF-ERRAV--TRFGAEALHIRNVLSRSRKHQHPKLASPVKSPRISSS 218

Query: 610 RS---TVRLMEAATKILDPGSHARNR---ALTYIGSARASGGVQGSNVGSLSRNVKDSVV 449
           R+     RL++AAT+IL+PG  A NR   ALTY GS       Q  N          S++
Sbjct: 219 RNVSRASRLIDAATRILEPGLQATNRAKCALTYSGSIHYLLLKQQQNEVKYDVAAGKSLM 278

Query: 448 G--SCRSCGGLVEV 413
           G  SC++CG L++V
Sbjct: 279 GQASCKNCGNLLDV 292


>ref|XP_002280570.2| PREDICTED: uncharacterized protein LOC100263470 [Vitis vinifera]
            gi|296087265|emb|CBI33639.3| unnamed protein product
            [Vitis vinifera]
          Length = 1004

 Score =  112 bits (281), Expect = 1e-22
 Identities = 124/377 (32%), Positives = 176/377 (46%), Gaps = 59/377 (15%)
 Frame = -2

Query: 961  MKTAGLVARLMGLETMPVVYQEKPRKALDSELYFDRDESW--DCSRLDQDLCTEMGGNGK 788
            M    LVARLMGLE+MP V + KPR A  SE+  DR+E +  + S  D++      G  K
Sbjct: 103  MGAPSLVARLMGLESMPSVQRSKPRTASISEICNDREEKFVNNHSGFDKEDLNLEKGITK 162

Query: 787  IDSRPQKIQKTGGFLEKQTVNASRFSSDAFRFNKSMLAGSKKQHH--KLPTPVKSPRTL- 617
             +SRPQK+QKT    E++ V   RF ++A +F K++L+ SKK HH  KL +P KSPR L 
Sbjct: 163  HESRPQKLQKT-ALTERRAV--GRFGAEALQF-KTILSRSKKHHHHPKLASPAKSPRILS 218

Query: 616  -PRRSTVRLMEAATKILDPGSHARNR---ALTYIGSA--RASGGVQGSNVGSLSRNVKDS 455
              R +T RL++AATKIL+P   A NR   A+TY  S      G V   N   LS +    
Sbjct: 219  GSRTNTSRLIDAATKILEPSLQATNRAKSAITYSNSILHPVKGEVMKENTTDLSLDPSKQ 278

Query: 454  V------------VGSCRSCGGLVEVPGLRLGEC------GSST----------SDFSNA 359
                           SC++CG  ++V  +R           SST          SD SNA
Sbjct: 279  FGYCASASKPLKGQSSCKNCGNFLDVVDVRSSVVEQAPVFASSTAHLASGPFQESDRSNA 338

Query: 358  SC---SDVGYEGIGI--KPLDKVASLVDQVKANAKNRASD-------NVEKKYNIVEVRE 215
                 S +  E I +  K  D+ ASL  Q   N + R+         + E K       +
Sbjct: 339  RLPIPSSIKPERIVVLKKIPDQHASLASQANENMQARSEPFRDGKPISGEGKDQWHLASQ 398

Query: 214  QRKCEEDVIPKPGPKVKNLRQNPVPSIKGKVTGKQ-----DGRRYPNEVNR---SKDFVS 59
            Q K ++DV      +   L QN +   + +   +        RR  + VN    +KD++S
Sbjct: 399  QCKPQKDVSSPVAFRHSTLTQNQMSISRDRTPPRAKLNDLQSRRIASPVNAVSGAKDYIS 458

Query: 58   SSKNLNKTTVTRPAKVV 8
             +++L+  T  R A  V
Sbjct: 459  LNRSLSGHTRPRMAMKV 475


>ref|XP_002329292.1| predicted protein [Populus trichocarpa] gi|222870746|gb|EEF07877.1|
           predicted protein [Populus trichocarpa]
          Length = 703

 Score =  103 bits (258), Expect = 5e-20
 Identities = 81/235 (34%), Positives = 132/235 (56%), Gaps = 29/235 (12%)
 Frame = -2

Query: 961 MKTAGLVARLMGLETMPVVYQEKPRK---ALDSELYFDRDESWDCSRLDQDLCTEMGGNG 791
           M+  GLVARLMGL+++P  +++K +K   ++D ++  ++  +   S  D+D    + G+ 
Sbjct: 101 MRAPGLVARLMGLDSLPAAHRDKHKKVSNSVDCDVTEEKFVNKCRSGSDRDGLNVVKGSE 160

Query: 790 KIDSRPQKIQKTGGFLEKQTVNASRFSSDAFRFNKSMLAGSKKQHH-KLPTPVKSPRTLP 614
           K++SRPQK+QKTG F E++ V  +RF ++A +  K +L+ S+K HH KL  PVKSPR   
Sbjct: 161 KVESRPQKLQKTGQF-ERRAV--TRFGAEALQM-KGVLSRSRKHHHPKLAPPVKSPRNSS 216

Query: 613 RRS---TVRLMEAATKILDPGSHARNR---ALTYIGSAR--ASGGVQGSNVGSLSRN-VK 461
            ++   T RL++AAT+IL+PG  A NR   ALTY  S        V    +G +  N VK
Sbjct: 217 SKNASRTSRLIDAATRILEPGLQATNRAKSALTYSSSVNYCPRDEVLAEEIGIMLPNIVK 276

Query: 460 DSVVGSC--------------RSCGGLVEVPGLRLGE--CGSSTSDFSNASCSDV 344
              +  C              ++CG L + P L+  +  C S+ S++ ++  S++
Sbjct: 277 QQDIEDCNEGAGKSFIGQTSYKNCGNLFDEPNLKEQQFVCPSTGSNYLSSHESEM 331


>ref|XP_002305171.1| predicted protein [Populus trichocarpa] gi|222848135|gb|EEE85682.1|
           predicted protein [Populus trichocarpa]
          Length = 978

 Score =  101 bits (252), Expect = 2e-19
 Identities = 80/239 (33%), Positives = 133/239 (55%), Gaps = 33/239 (13%)
 Frame = -2

Query: 961 MKTAGLVARLMGLETMPVVYQEKPRKALDS---ELYFDRDESWDCSRLDQDLCTEMGGNG 791
           M+   LVARLMGL+++P V+++K +K  +S   ++  ++  +   S  D++      G+ 
Sbjct: 105 MRAPSLVARLMGLDSLPAVHRDKHKKVSNSVACDVTEEKLVNDSHSESDRNDLNMEKGST 164

Query: 790 KIDSRPQKIQKTGGFLEKQTVNASRFSSDAFRFNKSMLAGSKKQHH-KLPTPVKSPRTLP 614
           K++SRPQK+QKTG F E+Q +  +RF +D  + N S+L+ S++ HH KL  PVKSPR   
Sbjct: 165 KVESRPQKLQKTGQF-ERQAL--TRFGADVLQIN-SVLSRSRRHHHPKLAPPVKSPRISS 220

Query: 613 RRS---TVRLMEAATKILDPGSHARNR---ALTYIGSAR---------------ASGGVQ 497
            ++   T RL++AAT+IL+PG  A NR   ALTY  S                     V+
Sbjct: 221 SKNASRTSRLIDAATRILEPGLQATNRSKSALTYPSSMNYCPRDEVLTEEIGIMLPNIVK 280

Query: 496 GSNVGSLSRNVKDSVVG--SCRSCGGLVEV----PGLRLGE--CGSSTSDFSNASCSDV 344
             ++G  +     S +G  SC++CG L +V    P ++  +  C S+ S++ ++  S++
Sbjct: 281 QQDIGDCNEGEGTSFIGQTSCKNCGNLFDVVDSRPNVKERQFVCPSTPSNYMSSQESEM 339


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