BLASTX nr result

ID: Dioscorea21_contig00008586 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00008586
         (439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002464580.1| hypothetical protein SORBIDRAFT_01g021230 [S...    58   9e-07

>ref|XP_002464580.1| hypothetical protein SORBIDRAFT_01g021230 [Sorghum bicolor]
           gi|241918434|gb|EER91578.1| hypothetical protein
           SORBIDRAFT_01g021230 [Sorghum bicolor]
          Length = 882

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 46/129 (35%), Positives = 66/129 (51%)
 Frame = -1

Query: 415 ADREKLDGHKIEAKPTAAQISRKSSSALSSMFRATSSKRKVMIDSIATAEQGKNVNKVDQ 236
           AD EKL   + +A     Q+S++ + A  ++F   ++ RK  +       QGK   KVD+
Sbjct: 635 ADTEKLSNDQQQAAKATVQVSKRPT-AFGALFGKPAAGRKPDLFLGFPNVQGKT--KVDK 691

Query: 235 IEASFVPPLHSFSGVDRSSSQLHPEMENNPRQAYPENIQQNDSQPSTTTGLDEVIPLENE 56
           I +S V P H FSG  + SS + P  E+    + PENIQ  D        L+EVI L+ E
Sbjct: 692 ITSSVVLPFHHFSGGAKPSSPILPAKES--LHSEPENIQHGD----PACRLEEVIQLDME 745

Query: 55  TGKCQMAEN 29
           T + Q  EN
Sbjct: 746 TDEPQPPEN 754


Top