BLASTX nr result
ID: Dioscorea21_contig00008583
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00008583 (434 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002894599.1| hypothetical protein ARALYDRAFT_337754 [Arab... 141 5e-32 ref|XP_002868724.1| hypothetical protein ARALYDRAFT_916372 [Arab... 141 5e-32 ref|NP_175868.1| gamma histone variant H2AX [Arabidopsis thalian... 141 5e-32 ref|XP_004135645.1| PREDICTED: probable histone H2AXb-like [Cucu... 140 8e-32 ref|XP_002892475.1| hypothetical protein ARALYDRAFT_888122 [Arab... 140 8e-32 >ref|XP_002894599.1| hypothetical protein ARALYDRAFT_337754 [Arabidopsis lyrata subsp. lyrata] gi|297340441|gb|EFH70858.1| hypothetical protein ARALYDRAFT_337754 [Arabidopsis lyrata subsp. lyrata] Length = 209 Score = 141 bits (356), Expect = 5e-32 Identities = 78/99 (78%), Positives = 78/99 (78%), Gaps = 2/99 (2%) Frame = -3 Query: 291 MSSGAA--TTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXX 118 MSSGA TTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAP Sbjct: 1 MSSGAGSGTTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLS 60 Query: 117 XXXXXXXXXXXXXAGNAARDNKKNRIVPRHIQLAVRNDE 1 AGNAARDNKK RIVPRHIQLAVRNDE Sbjct: 61 AVLEYLAAELLELAGNAARDNKKTRIVPRHIQLAVRNDE 99 >ref|XP_002868724.1| hypothetical protein ARALYDRAFT_916372 [Arabidopsis lyrata subsp. lyrata] gi|297314560|gb|EFH44983.1| hypothetical protein ARALYDRAFT_916372 [Arabidopsis lyrata subsp. lyrata] Length = 142 Score = 141 bits (356), Expect = 5e-32 Identities = 78/99 (78%), Positives = 78/99 (78%), Gaps = 2/99 (2%) Frame = -3 Query: 291 MSSGAA--TTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXX 118 MSSGA TTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAP Sbjct: 1 MSSGAGSGTTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLS 60 Query: 117 XXXXXXXXXXXXXAGNAARDNKKNRIVPRHIQLAVRNDE 1 AGNAARDNKK RIVPRHIQLAVRNDE Sbjct: 61 AVLEYLAAELLELAGNAARDNKKTRIVPRHIQLAVRNDE 99 >ref|NP_175868.1| gamma histone variant H2AX [Arabidopsis thaliana] gi|75313113|sp|Q9S9K7.1|H2AXB_ARATH RecName: Full=Probable histone H2AXb; AltName: Full=HTA3 gi|15724172|gb|AAL06478.1|AF411788_1 At1g54690/T22H22_12 [Arabidopsis thaliana] gi|3776566|gb|AAC64883.1| Strong similarity to histone H2A gb|AJ006768 from Cicer arietinum [Arabidopsis thaliana] gi|20334846|gb|AAM16179.1| At1g54690/T22H22_12 [Arabidopsis thaliana] gi|21553797|gb|AAM62890.1| histone H2A, putative [Arabidopsis thaliana] gi|332195014|gb|AEE33135.1| gamma histone variant H2AX [Arabidopsis thaliana] Length = 142 Score = 141 bits (356), Expect = 5e-32 Identities = 78/99 (78%), Positives = 78/99 (78%), Gaps = 2/99 (2%) Frame = -3 Query: 291 MSSGAA--TTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXX 118 MSSGA TTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAP Sbjct: 1 MSSGAGSGTTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLS 60 Query: 117 XXXXXXXXXXXXXAGNAARDNKKNRIVPRHIQLAVRNDE 1 AGNAARDNKK RIVPRHIQLAVRNDE Sbjct: 61 AVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDE 99 >ref|XP_004135645.1| PREDICTED: probable histone H2AXb-like [Cucumis sativus] gi|449485770|ref|XP_004157270.1| PREDICTED: probable histone H2AXb-like [Cucumis sativus] Length = 140 Score = 140 bits (354), Expect = 8e-32 Identities = 75/97 (77%), Positives = 76/97 (78%) Frame = -3 Query: 291 MSSGAATTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXX 112 MSS +TKGGRGKPKATKSVSRS KAGLQFPVGRIARFLKAGKYAERVGAGAP Sbjct: 1 MSSTGGSTKGGRGKPKATKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV 60 Query: 111 XXXXXXXXXXXAGNAARDNKKNRIVPRHIQLAVRNDE 1 AGNAARDNKKNRIVPRHIQLAVRNDE Sbjct: 61 LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDE 97 >ref|XP_002892475.1| hypothetical protein ARALYDRAFT_888122 [Arabidopsis lyrata subsp. lyrata] gi|297338317|gb|EFH68734.1| hypothetical protein ARALYDRAFT_888122 [Arabidopsis lyrata subsp. lyrata] Length = 142 Score = 140 bits (354), Expect = 8e-32 Identities = 74/95 (77%), Positives = 76/95 (80%) Frame = -3 Query: 285 SGAATTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXX 106 +G+ TTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAP Sbjct: 5 AGSGTTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLE 64 Query: 105 XXXXXXXXXAGNAARDNKKNRIVPRHIQLAVRNDE 1 AGNAARDNKK RIVPRHIQLAVRNDE Sbjct: 65 YLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDE 99