BLASTX nr result

ID: Dioscorea21_contig00008582 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00008582
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004148883.1| PREDICTED: histone H2AX-like [Cucumis sativu...   129   2e-28
ref|XP_003625881.1| Histone H2A [Medicago truncatula] gi|3555008...   129   2e-28
gb|AEQ33640.1| histone H2A [Lycium barbarum]                          129   2e-28
ref|XP_004135645.1| PREDICTED: probable histone H2AXb-like [Cucu...   129   2e-28
ref|XP_003626340.1| Histone H2A [Medicago truncatula] gi|3575121...   129   2e-28

>ref|XP_004148883.1| PREDICTED: histone H2AX-like [Cucumis sativus]
           gi|449528788|ref|XP_004171385.1| PREDICTED: histone
           H2AX-like [Cucumis sativus]
          Length = 139

 Score =  129 bits (325), Expect = 2e-28
 Identities = 69/87 (79%), Positives = 69/87 (79%)
 Frame = -2

Query: 263 GKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXA 84
           GKPKATKSVSRS KAGLQFPVGRIARFLKAGKYAERVGAGAP                 A
Sbjct: 12  GKPKATKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELA 71

Query: 83  GNAARDNKKNRIVPRHIQLAVRNDEEL 3
           GNAARDNKKNRIVPRHIQLAVRNDEEL
Sbjct: 72  GNAARDNKKNRIVPRHIQLAVRNDEEL 98


>ref|XP_003625881.1| Histone H2A [Medicago truncatula] gi|355500896|gb|AES82099.1|
           Histone H2A [Medicago truncatula]
           gi|388495504|gb|AFK35818.1| unknown [Medicago
           truncatula]
          Length = 142

 Score =  129 bits (325), Expect = 2e-28
 Identities = 69/87 (79%), Positives = 70/87 (80%)
 Frame = -2

Query: 263 GKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXA 84
           GKPKA+KSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAP                 A
Sbjct: 15  GKPKASKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELA 74

Query: 83  GNAARDNKKNRIVPRHIQLAVRNDEEL 3
           GNAARDNKKNRIVPRHIQLAVRNDEEL
Sbjct: 75  GNAARDNKKNRIVPRHIQLAVRNDEEL 101


>gb|AEQ33640.1| histone H2A [Lycium barbarum]
          Length = 142

 Score =  129 bits (325), Expect = 2e-28
 Identities = 69/87 (79%), Positives = 70/87 (80%)
 Frame = -2

Query: 263 GKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXA 84
           GKPKA+KSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAP                 A
Sbjct: 15  GKPKASKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELA 74

Query: 83  GNAARDNKKNRIVPRHIQLAVRNDEEL 3
           GNAARDNKKNRIVPRHIQLAVRNDEEL
Sbjct: 75  GNAARDNKKNRIVPRHIQLAVRNDEEL 101


>ref|XP_004135645.1| PREDICTED: probable histone H2AXb-like [Cucumis sativus]
           gi|449485770|ref|XP_004157270.1| PREDICTED: probable
           histone H2AXb-like [Cucumis sativus]
          Length = 140

 Score =  129 bits (324), Expect = 2e-28
 Identities = 69/87 (79%), Positives = 69/87 (79%)
 Frame = -2

Query: 263 GKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXA 84
           GKPKATKSVSRS KAGLQFPVGRIARFLKAGKYAERVGAGAP                 A
Sbjct: 13  GKPKATKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELA 72

Query: 83  GNAARDNKKNRIVPRHIQLAVRNDEEL 3
           GNAARDNKKNRIVPRHIQLAVRNDEEL
Sbjct: 73  GNAARDNKKNRIVPRHIQLAVRNDEEL 99


>ref|XP_003626340.1| Histone H2A [Medicago truncatula] gi|357512107|ref|XP_003626342.1|
           Histone H2A [Medicago truncatula]
           gi|124360158|gb|ABN08174.1| Histone H2A; Histone-fold
           [Medicago truncatula] gi|124360160|gb|ABN08176.1|
           Histone H2A; Histone-fold [Medicago truncatula]
           gi|355501355|gb|AES82558.1| Histone H2A [Medicago
           truncatula] gi|355501357|gb|AES82560.1| Histone H2A
           [Medicago truncatula] gi|388498640|gb|AFK37386.1|
           unknown [Medicago truncatula]
          Length = 139

 Score =  129 bits (324), Expect = 2e-28
 Identities = 69/87 (79%), Positives = 69/87 (79%)
 Frame = -2

Query: 263 GKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXA 84
           GKPKA KSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAP                 A
Sbjct: 12  GKPKAAKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELA 71

Query: 83  GNAARDNKKNRIVPRHIQLAVRNDEEL 3
           GNAARDNKKNRIVPRHIQLAVRNDEEL
Sbjct: 72  GNAARDNKKNRIVPRHIQLAVRNDEEL 98


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