BLASTX nr result

ID: Dioscorea21_contig00008573 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00008573
         (399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001063736.1| Os09g0528200 [Oryza sativa Japonica Group] g...   139   3e-31
sp|Q651Z5.1|HOX6_ORYSJ RecName: Full=Homeobox-leucine zipper pro...   139   3e-31
ref|XP_002462710.1| hypothetical protein SORBIDRAFT_02g030660 [S...   137   7e-31
ref|NP_001183573.1| uncharacterized protein LOC100502166 [Zea ma...   136   2e-30
dbj|BAK08147.1| predicted protein [Hordeum vulgare subsp. vulgare]    134   8e-30

>ref|NP_001063736.1| Os09g0528200 [Oryza sativa Japonica Group]
           gi|5006857|gb|AAD37699.1|AF145730_1 homeodomain leucine
           zipper protein, partial [Oryza sativa Indica Group]
           gi|113631969|dbj|BAF25650.1| Os09g0528200, partial
           [Oryza sativa Japonica Group]
          Length = 212

 Score =  139 bits (349), Expect = 3e-31
 Identities = 77/126 (61%), Positives = 84/126 (66%)
 Frame = +1

Query: 22  GNCSGNKDKKKRFSEEQIKSLETMFETQTKLEPXXXXXXXXXXXXXXXXXXXXXXXXXXX 201
           G   G  D+KKRFSEEQIKSLE+MF TQTKLEP                           
Sbjct: 44  GGGGGAADRKKRFSEEQIKSLESMFATQTKLEPR-------------------------- 77

Query: 202 XXXQKLQLARELGLQPRQVAIWFQNKRARWKSKQLEREYSSLRSDYDQLLSSFEALQREK 381
              QKLQLARELGLQPRQVAIWFQNKRARWKSKQLEREYS+LR DYD LL S+E+L++EK
Sbjct: 78  ---QKLQLARELGLQPRQVAIWFQNKRARWKSKQLEREYSALRDDYDALLCSYESLKKEK 134

Query: 382 QILAKQ 399
             L KQ
Sbjct: 135 LALIKQ 140


>sp|Q651Z5.1|HOX6_ORYSJ RecName: Full=Homeobox-leucine zipper protein HOX6; AltName:
           Full=HD-ZIP protein HOX6; AltName: Full=Homeodomain
           transcription factor HOX6; AltName: Full=OsHox6
           gi|187609458|sp|Q9XH35.2|HOX6_ORYSI RecName:
           Full=Homeobox-leucine zipper protein HOX6; AltName:
           Full=HD-ZIP protein HOX6; AltName: Full=Homeodomain
           transcription factor HOX6; AltName: Full=OsHox6
           gi|52077331|dbj|BAD46372.1| putative homeodomain leucine
           zipper protein [Oryza sativa Japonica Group]
           gi|215736997|dbj|BAG95926.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215765407|dbj|BAG87104.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 249

 Score =  139 bits (349), Expect = 3e-31
 Identities = 77/126 (61%), Positives = 84/126 (66%)
 Frame = +1

Query: 22  GNCSGNKDKKKRFSEEQIKSLETMFETQTKLEPXXXXXXXXXXXXXXXXXXXXXXXXXXX 201
           G   G  D+KKRFSEEQIKSLE+MF TQTKLEP                           
Sbjct: 22  GGGGGAADRKKRFSEEQIKSLESMFATQTKLEPR-------------------------- 55

Query: 202 XXXQKLQLARELGLQPRQVAIWFQNKRARWKSKQLEREYSSLRSDYDQLLSSFEALQREK 381
              QKLQLARELGLQPRQVAIWFQNKRARWKSKQLEREYS+LR DYD LL S+E+L++EK
Sbjct: 56  ---QKLQLARELGLQPRQVAIWFQNKRARWKSKQLEREYSALRDDYDALLCSYESLKKEK 112

Query: 382 QILAKQ 399
             L KQ
Sbjct: 113 LALIKQ 118


>ref|XP_002462710.1| hypothetical protein SORBIDRAFT_02g030660 [Sorghum bicolor]
           gi|241926087|gb|EER99231.1| hypothetical protein
           SORBIDRAFT_02g030660 [Sorghum bicolor]
          Length = 243

 Score =  137 bits (346), Expect = 7e-31
 Identities = 79/128 (61%), Positives = 85/128 (66%), Gaps = 1/128 (0%)
 Frame = +1

Query: 19  KGNCSGNKDK-KKRFSEEQIKSLETMFETQTKLEPXXXXXXXXXXXXXXXXXXXXXXXXX 195
           KG   G  DK KKRFSEEQIKSLE+MF TQTKLEP                         
Sbjct: 23  KGGGGGALDKNKKRFSEEQIKSLESMFATQTKLEPR------------------------ 58

Query: 196 XXXXXQKLQLARELGLQPRQVAIWFQNKRARWKSKQLEREYSSLRSDYDQLLSSFEALQR 375
                QKLQLARELGLQPRQVAIWFQNKRARWKSKQLEREYS+LR DYD LL S+E+L++
Sbjct: 59  -----QKLQLARELGLQPRQVAIWFQNKRARWKSKQLEREYSALRDDYDALLCSYESLKK 113

Query: 376 EKQILAKQ 399
           EK  L KQ
Sbjct: 114 EKHALLKQ 121


>ref|NP_001183573.1| uncharacterized protein LOC100502166 [Zea mays]
           gi|238013152|gb|ACR37611.1| unknown [Zea mays]
           gi|414886411|tpg|DAA62425.1| TPA: putative homeobox
           DNA-binding and leucine zipper domain family protein
           [Zea mays]
          Length = 239

 Score =  136 bits (343), Expect = 2e-30
 Identities = 77/133 (57%), Positives = 84/133 (63%)
 Frame = +1

Query: 1   GEGFVFKGNCSGNKDKKKRFSEEQIKSLETMFETQTKLEPXXXXXXXXXXXXXXXXXXXX 180
           G G   KG        KKRFSEEQIKSLE+MF TQTKLEP                    
Sbjct: 16  GAGATGKGKGGALDKNKKRFSEEQIKSLESMFATQTKLEPR------------------- 56

Query: 181 XXXXXXXXXXQKLQLARELGLQPRQVAIWFQNKRARWKSKQLEREYSSLRSDYDQLLSSF 360
                     QKLQLARELGLQPRQVAIWFQNKRARWKSKQLER+YS+LR DYD LL S+
Sbjct: 57  ----------QKLQLARELGLQPRQVAIWFQNKRARWKSKQLERDYSALRDDYDALLCSY 106

Query: 361 EALQREKQILAKQ 399
           E+L++EK  L KQ
Sbjct: 107 ESLKKEKHTLLKQ 119


>dbj|BAK08147.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 292

 Score =  134 bits (337), Expect = 8e-30
 Identities = 72/119 (60%), Positives = 82/119 (68%)
 Frame = +1

Query: 43  DKKKRFSEEQIKSLETMFETQTKLEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKLQ 222
           D+KKRFSEEQIKSLE+MF TQTKLEP                              QKLQ
Sbjct: 67  DRKKRFSEEQIKSLESMFATQTKLEPR-----------------------------QKLQ 97

Query: 223 LARELGLQPRQVAIWFQNKRARWKSKQLEREYSSLRSDYDQLLSSFEALQREKQILAKQ 399
           LARELGLQPRQVAIWFQNKRARWKSKQLER+Y++LR DYD LLSS++ L+++KQ L  Q
Sbjct: 98  LARELGLQPRQVAIWFQNKRARWKSKQLERQYAALRDDYDALLSSYDQLKKDKQALVNQ 156


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