BLASTX nr result

ID: Dioscorea21_contig00008564 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00008564
         (759 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003569102.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    69   1e-09
emb|CBI31649.3| unnamed protein product [Vitis vinifera]               68   2e-09
ref|XP_002283100.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    68   2e-09
emb|CAN70319.1| hypothetical protein VITISV_016758 [Vitis vinifera]    68   2e-09
gb|EEE62065.1| hypothetical protein OsJ_16849 [Oryza sativa Japo...    68   2e-09

>ref|XP_003569102.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Brachypodium
           distachyon]
          Length = 410

 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 35/68 (51%), Positives = 37/68 (54%)
 Frame = -2

Query: 758 TEVGRRMXXXXXXXXEAVGLTIWRLPXXXXXXXXXXXXXXXGERELPVVYTEMDGGFNTG 579
           T+  R          E VGLTIWRLP                ERELPVVYTEMDGGFN G
Sbjct: 265 TDAARSRASNAGTEEETVGLTIWRLPGGGFAVGRFAGGRRPEERELPVVYTEMDGGFNNG 324

Query: 578 GAPRRVLW 555
           GAPRR+ W
Sbjct: 325 GAPRRISW 332


>emb|CBI31649.3| unnamed protein product [Vitis vinifera]
          Length = 761

 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 33/51 (64%), Positives = 34/51 (66%)
 Frame = -2

Query: 707 VGLTIWRLPXXXXXXXXXXXXXXXGERELPVVYTEMDGGFNTGGAPRRVLW 555
           VGLTIWRLP               GERELPVVYTEMDGGFN GGAPRR+ W
Sbjct: 224 VGLTIWRLPGGGFAVGRFSGGRRGGERELPVVYTEMDGGFNNGGAPRRISW 274


>ref|XP_002283100.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Vitis vinifera]
          Length = 361

 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 33/51 (64%), Positives = 34/51 (66%)
 Frame = -2

Query: 707 VGLTIWRLPXXXXXXXXXXXXXXXGERELPVVYTEMDGGFNTGGAPRRVLW 555
           VGLTIWRLP               GERELPVVYTEMDGGFN GGAPRR+ W
Sbjct: 239 VGLTIWRLPGGGFAVGRFSGGRRGGERELPVVYTEMDGGFNNGGAPRRISW 289


>emb|CAN70319.1| hypothetical protein VITISV_016758 [Vitis vinifera]
          Length = 365

 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 33/51 (64%), Positives = 34/51 (66%)
 Frame = -2

Query: 707 VGLTIWRLPXXXXXXXXXXXXXXXGERELPVVYTEMDGGFNTGGAPRRVLW 555
           VGLTIWRLP               GERELPVVYTEMDGGFN GGAPRR+ W
Sbjct: 243 VGLTIWRLPGGGFAVGRFSGGRRGGERELPVVYTEMDGGFNNGGAPRRISW 293


>gb|EEE62065.1| hypothetical protein OsJ_16849 [Oryza sativa Japonica Group]
          Length = 243

 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 32/51 (62%), Positives = 33/51 (64%)
 Frame = -2

Query: 707 VGLTIWRLPXXXXXXXXXXXXXXXGERELPVVYTEMDGGFNTGGAPRRVLW 555
           VGLTIWRLP                ERELPVVYTEMDGGFN GGAPRR+ W
Sbjct: 116 VGLTIWRLPGGGFAVGRFAGGRRPEERELPVVYTEMDGGFNNGGAPRRISW 166


Top