BLASTX nr result

ID: Dioscorea21_contig00008538 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00008538
         (1214 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGG37283.1| alpha-tubulin 1 [Salix arbutifolia]                    710   0.0  
gb|ABO47740.1| alpha-tubulin [Gossypium hirsutum] gi|223453026|g...   710   0.0  
ref|XP_002510010.1| tubulin alpha chain, putative [Ricinus commu...   709   0.0  
ref|XP_002522104.1| tubulin alpha chain, putative [Ricinus commu...   709   0.0  
gb|ACJ60905.1| alpha tubulin [Betula pendula]                         709   0.0  

>gb|AGG37283.1| alpha-tubulin 1 [Salix arbutifolia]
          Length = 451

 Score =  710 bits (1832), Expect = 0.0
 Identities = 354/374 (94%), Positives = 356/374 (95%)
 Frame = -1

Query: 1214 GKHVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLC 1035
            GKHVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLC
Sbjct: 59   GKHVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLC 118

Query: 1034 LDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXSVDYGKKSKLGFTVYPSPQVS 855
            LDRIRKLADNCTGLQGFLVFNAV                SVDYGKKSKLGFTVYPSPQVS
Sbjct: 119  LDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVS 178

Query: 854  TSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIDRPTYTNLNRLISQVISSL 675
            TSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDI+RPTYTNLNRL+SQVISSL
Sbjct: 179  TSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSL 238

Query: 674  TASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEP 495
            TASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEP
Sbjct: 239  TASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEP 298

Query: 494  SSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQ 315
            SSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQ
Sbjct: 299  SSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQ 358

Query: 314  APTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYQKRAFVHWYVGEGMEEGEF 135
             PTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMY KRAFVHWYVGEGMEEGEF
Sbjct: 359  PPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEF 418

Query: 134  SEAREDLAALEKDY 93
            SEAREDLAALEKDY
Sbjct: 419  SEAREDLAALEKDY 432


>gb|ABO47740.1| alpha-tubulin [Gossypium hirsutum] gi|223453026|gb|ACM89777.1|
            alpha-tubulin 10 [Gossypium hirsutum]
          Length = 450

 Score =  710 bits (1832), Expect = 0.0
 Identities = 354/374 (94%), Positives = 356/374 (95%)
 Frame = -1

Query: 1214 GKHVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLC 1035
            GKHVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLC
Sbjct: 59   GKHVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLC 118

Query: 1034 LDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXSVDYGKKSKLGFTVYPSPQVS 855
            LDRIRKLADNCTGLQGFLVFNAV                SVDYGKKSKLGFTVYPSPQVS
Sbjct: 119  LDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVS 178

Query: 854  TSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIDRPTYTNLNRLISQVISSL 675
            TSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDI+RPTYTNLNRL+SQVISSL
Sbjct: 179  TSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSL 238

Query: 674  TASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEP 495
            TASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEP
Sbjct: 239  TASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEP 298

Query: 494  SSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQ 315
            SSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQ
Sbjct: 299  SSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQ 358

Query: 314  APTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYQKRAFVHWYVGEGMEEGEF 135
             PTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMY KRAFVHWYVGEGMEEGEF
Sbjct: 359  PPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEF 418

Query: 134  SEAREDLAALEKDY 93
            SEAREDLAALEKDY
Sbjct: 419  SEAREDLAALEKDY 432


>ref|XP_002510010.1| tubulin alpha chain, putative [Ricinus communis]
            gi|223550711|gb|EEF52197.1| tubulin alpha chain, putative
            [Ricinus communis]
          Length = 451

 Score =  709 bits (1831), Expect = 0.0
 Identities = 353/374 (94%), Positives = 356/374 (95%)
 Frame = -1

Query: 1214 GKHVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLC 1035
            GKHVPRA+FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLC
Sbjct: 59   GKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLC 118

Query: 1034 LDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXSVDYGKKSKLGFTVYPSPQVS 855
            LDRIRKLADNCTGLQGFLVFNAV                SVDYGKKSKLGFTVYPSPQVS
Sbjct: 119  LDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVS 178

Query: 854  TSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIDRPTYTNLNRLISQVISSL 675
            TSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDI+RPTYTNLNRL+SQVISSL
Sbjct: 179  TSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSL 238

Query: 674  TASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEP 495
            TASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEP
Sbjct: 239  TASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEP 298

Query: 494  SSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQ 315
            SSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQ
Sbjct: 299  SSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQ 358

Query: 314  APTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYQKRAFVHWYVGEGMEEGEF 135
             PTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMY KRAFVHWYVGEGMEEGEF
Sbjct: 359  PPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEF 418

Query: 134  SEAREDLAALEKDY 93
            SEAREDLAALEKDY
Sbjct: 419  SEAREDLAALEKDY 432


>ref|XP_002522104.1| tubulin alpha chain, putative [Ricinus communis]
            gi|223538703|gb|EEF40304.1| tubulin alpha chain, putative
            [Ricinus communis]
          Length = 450

 Score =  709 bits (1831), Expect = 0.0
 Identities = 353/374 (94%), Positives = 356/374 (95%)
 Frame = -1

Query: 1214 GKHVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLC 1035
            GKHVPRA+FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLC
Sbjct: 59   GKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLC 118

Query: 1034 LDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXSVDYGKKSKLGFTVYPSPQVS 855
            LDRIRKLADNCTGLQGFLVFNAV                SVDYGKKSKLGFTVYPSPQVS
Sbjct: 119  LDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVS 178

Query: 854  TSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIDRPTYTNLNRLISQVISSL 675
            TSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDI+RPTYTNLNRL+SQVISSL
Sbjct: 179  TSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSL 238

Query: 674  TASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEP 495
            TASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEP
Sbjct: 239  TASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEP 298

Query: 494  SSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQ 315
            SSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQ
Sbjct: 299  SSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQ 358

Query: 314  APTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYQKRAFVHWYVGEGMEEGEF 135
             PTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMY KRAFVHWYVGEGMEEGEF
Sbjct: 359  PPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEF 418

Query: 134  SEAREDLAALEKDY 93
            SEAREDLAALEKDY
Sbjct: 419  SEAREDLAALEKDY 432


>gb|ACJ60905.1| alpha tubulin [Betula pendula]
          Length = 450

 Score =  709 bits (1831), Expect = 0.0
 Identities = 353/374 (94%), Positives = 356/374 (95%)
 Frame = -1

Query: 1214 GKHVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLC 1035
            GKHVPRA+FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLC
Sbjct: 59   GKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLC 118

Query: 1034 LDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXSVDYGKKSKLGFTVYPSPQVS 855
            LDRIRKLADNCTGLQGFLVFNAV                SVDYGKKSKLGFTVYPSPQVS
Sbjct: 119  LDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVS 178

Query: 854  TSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIDRPTYTNLNRLISQVISSL 675
            TSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDI+RPTYTNLNRL+SQVISSL
Sbjct: 179  TSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSL 238

Query: 674  TASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEP 495
            TASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEP
Sbjct: 239  TASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEP 298

Query: 494  SSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQ 315
            SSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQ
Sbjct: 299  SSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQ 358

Query: 314  APTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYQKRAFVHWYVGEGMEEGEF 135
             PTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMY KRAFVHWYVGEGMEEGEF
Sbjct: 359  PPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEF 418

Query: 134  SEAREDLAALEKDY 93
            SEAREDLAALEKDY
Sbjct: 419  SEAREDLAALEKDY 432


Top