BLASTX nr result

ID: Dioscorea21_contig00008529 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00008529
         (1095 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318640.1| predicted protein [Populus trichocarpa] gi|2...   385   e-105
gb|AAF43923.1|AF239751_1 Rac-like protein Rop1 [Tradescantia vir...   382   e-104
ref|XP_002322155.1| predicted protein [Populus trichocarpa] gi|2...   382   e-104
emb|CAD42725.1| putative rac protein [Nicotiana tabacum]              381   e-103
ref|XP_002511439.1| rac gtpase, putative [Ricinus communis] gi|2...   380   e-103

>ref|XP_002318640.1| predicted protein [Populus trichocarpa] gi|222859313|gb|EEE96860.1|
           predicted protein [Populus trichocarpa]
          Length = 211

 Score =  385 bits (990), Expect = e-105
 Identities = 187/212 (88%), Positives = 197/212 (92%)
 Frame = +2

Query: 302 MSSSASRFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVVEGTTVNLGL 481
           M+SSASRFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVVEGTTVNLGL
Sbjct: 1   MASSASRFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVVEGTTVNLGL 60

Query: 482 WDTAGQEDYNRLRPLSYRAADVFVLAFSLVSRASYENVLKKWVPELQHYAPGVPVVLVGT 661
           WDTAGQEDYNRLRPLSYR ADVFVLAFSLVSRASYENVLKKW+PELQHYAPG+P+VLVG 
Sbjct: 61  WDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHYAPGIPIVLVGA 120

Query: 662 KLDLREDKHYLADHPGMLPVTTAQGEELRKQIGATYYIECSSKTQQNVKAVFDAAIRVVI 841
           KLDLREDKHYLADHPG++PVTTAQGEELRKQIGA YY+ECSSKTQQNVKAVFDAAI+VVI
Sbjct: 121 KLDLREDKHYLADHPGLVPVTTAQGEELRKQIGAAYYVECSSKTQQNVKAVFDAAIKVVI 180

Query: 842 QPPSXXXXXXXXPRRGCSLLNVLCGRKLVCLK 937
           +P          PRRGC LLNV CGR+LVCLK
Sbjct: 181 KPAQKQKERKKKPRRGC-LLNVFCGRRLVCLK 211


>gb|AAF43923.1|AF239751_1 Rac-like protein Rop1 [Tradescantia virginiana]
          Length = 212

 Score =  382 bits (981), Expect = e-104
 Identities = 182/212 (85%), Positives = 194/212 (91%)
 Frame = +2

Query: 302 MSSSASRFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVVEGTTVNLGL 481
           MSSS SRFIKCVTVGDGAVG+TCMLICYTSNKFPTDY+PTVFDNFSANV+VE TTVNLGL
Sbjct: 1   MSSSVSRFIKCVTVGDGAVGETCMLICYTSNKFPTDYVPTVFDNFSANVIVENTTVNLGL 60

Query: 482 WDTAGQEDYNRLRPLSYRAADVFVLAFSLVSRASYENVLKKWVPELQHYAPGVPVVLVGT 661
           WDTAGQEDYNRLRPLSYR ADVFVLAFSLVSRASYENVLKKW+PELQHYAPGVP+VLVGT
Sbjct: 61  WDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHYAPGVPLVLVGT 120

Query: 662 KLDLREDKHYLADHPGMLPVTTAQGEELRKQIGATYYIECSSKTQQNVKAVFDAAIRVVI 841
           KLDLREDK YLADHPG++ V+TAQGEELRKQIGA YY+ECSSKTQQNVKAVFDAAI+VVI
Sbjct: 121 KLDLREDKQYLADHPGLMSVSTAQGEELRKQIGAAYYVECSSKTQQNVKAVFDAAIKVVI 180

Query: 842 QPPSXXXXXXXXPRRGCSLLNVLCGRKLVCLK 937
           QPP         PR GCS+LN+ CGRKLVC K
Sbjct: 181 QPPKHKDKKKKRPRHGCSILNIFCGRKLVCFK 212


>ref|XP_002322155.1| predicted protein [Populus trichocarpa] gi|222869151|gb|EEF06282.1|
           predicted protein [Populus trichocarpa]
          Length = 211

 Score =  382 bits (981), Expect = e-104
 Identities = 187/212 (88%), Positives = 196/212 (92%)
 Frame = +2

Query: 302 MSSSASRFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVVEGTTVNLGL 481
           M+SSASRFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANV VEGTTVNLGL
Sbjct: 1   MASSASRFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVAVEGTTVNLGL 60

Query: 482 WDTAGQEDYNRLRPLSYRAADVFVLAFSLVSRASYENVLKKWVPELQHYAPGVPVVLVGT 661
           WDTAGQEDYNRLRPLSYR ADVFVLAFSLVSRASYENVLKKW+PELQHYAPGVPVVLVGT
Sbjct: 61  WDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHYAPGVPVVLVGT 120

Query: 662 KLDLREDKHYLADHPGMLPVTTAQGEELRKQIGATYYIECSSKTQQNVKAVFDAAIRVVI 841
           KLDLREDKHYLADHPG++PVT AQGEELRKQIGA YYIECSSKTQQNVKAVFDAAI+VVI
Sbjct: 121 KLDLREDKHYLADHPGLVPVTMAQGEELRKQIGAAYYIECSSKTQQNVKAVFDAAIKVVI 180

Query: 842 QPPSXXXXXXXXPRRGCSLLNVLCGRKLVCLK 937
           +P          PRRGC LLNV CGR+L+CL+
Sbjct: 181 KPAQKQKERKKKPRRGC-LLNVFCGRRLLCLE 211


>emb|CAD42725.1| putative rac protein [Nicotiana tabacum]
          Length = 210

 Score =  381 bits (979), Expect = e-103
 Identities = 186/212 (87%), Positives = 198/212 (93%)
 Frame = +2

Query: 302 MSSSASRFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVVEGTTVNLGL 481
           M+SSASRFIKCVTVGDGAVGKTCMLICYTSNKFPTDY+PTVFDNFSANVVVEGTTVNLGL
Sbjct: 1   MASSASRFIKCVTVGDGAVGKTCMLICYTSNKFPTDYVPTVFDNFSANVVVEGTTVNLGL 60

Query: 482 WDTAGQEDYNRLRPLSYRAADVFVLAFSLVSRASYENVLKKWVPELQHYAPGVPVVLVGT 661
           WDTAGQEDYNRLRPLSYR ADVFVLAFSLVSRASYEN+LKKW+PELQHYAPG+PVVL GT
Sbjct: 61  WDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENILKKWIPELQHYAPGIPVVLAGT 120

Query: 662 KLDLREDKHYLADHPGMLPVTTAQGEELRKQIGATYYIECSSKTQQNVKAVFDAAIRVVI 841
           KLDLREDKH+LADHPG++PVTTAQGEELRKQIGA YYIECSSKTQQNVKAVFDAAI+VVI
Sbjct: 121 KLDLREDKHFLADHPGLVPVTTAQGEELRKQIGAAYYIECSSKTQQNVKAVFDAAIKVVI 180

Query: 842 QPPSXXXXXXXXPRRGCSLLNVLCGRKLVCLK 937
           +PP          RRGC L+NV+CGRKLVCLK
Sbjct: 181 KPPQ-KQKEKKKQRRGC-LMNVMCGRKLVCLK 210


>ref|XP_002511439.1| rac gtpase, putative [Ricinus communis] gi|223550554|gb|EEF52041.1|
           rac gtpase, putative [Ricinus communis]
          Length = 211

 Score =  380 bits (975), Expect = e-103
 Identities = 185/212 (87%), Positives = 195/212 (91%)
 Frame = +2

Query: 302 MSSSASRFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVVEGTTVNLGL 481
           M++SASRFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVVEGTTVNLGL
Sbjct: 1   MAASASRFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVVEGTTVNLGL 60

Query: 482 WDTAGQEDYNRLRPLSYRAADVFVLAFSLVSRASYENVLKKWVPELQHYAPGVPVVLVGT 661
           WDTAGQEDYNRLRPLSYR ADVFVLAFSLVSRASYENVLKKWVPELQHYAPGVP+VLVGT
Sbjct: 61  WDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWVPELQHYAPGVPIVLVGT 120

Query: 662 KLDLREDKHYLADHPGMLPVTTAQGEELRKQIGATYYIECSSKTQQNVKAVFDAAIRVVI 841
           KLDLREDKHYLADHPG+ PVTT QGEELRKQIGA YY+ECSSKTQQNVKAVFDA+I+VVI
Sbjct: 121 KLDLREDKHYLADHPGLTPVTTTQGEELRKQIGAAYYVECSSKTQQNVKAVFDASIKVVI 180

Query: 842 QPPSXXXXXXXXPRRGCSLLNVLCGRKLVCLK 937
           +P          P RGC LLNV CGR+LVCL+
Sbjct: 181 KPAPKQKEKKKKPSRGC-LLNVFCGRRLVCLR 211


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