BLASTX nr result

ID: Dioscorea21_contig00008513 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00008513
         (254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32345.3| unnamed protein product [Vitis vinifera]               66   3e-09
ref|NP_001241345.1| uncharacterized protein LOC100788682 [Glycin...    64   1e-08
ref|XP_003546666.1| PREDICTED: RNA exonuclease 4-like [Glycine max]    62   5e-08
gb|ACU17968.1| unknown [Glycine max]                                   62   5e-08
ref|XP_002524814.1| exonuclease, putative [Ricinus communis] gi|...    59   4e-07

>emb|CBI32345.3| unnamed protein product [Vitis vinifera]
          Length = 341

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 34/84 (40%), Positives = 48/84 (57%)
 Frame = -2

Query: 253 GPLPKESCAKTFSSLGCDLCLKVFDDTDVLSAHESSCRLDPAIIPELPGMLSLETCDVEV 74
           G LPK++C K FS  GC+ CLK+F + D LS H+  C+L   +  E   M S E+  ++ 
Sbjct: 65  GNLPKKNCLKIFSEQGCNYCLKIFKNADSLSEHKEMCQLPVPVTIEKIRMPSTES-QIDF 123

Query: 73  SSLTVADANEQGPEVVALDCELVG 2
           S     D   +G E +A+DCE VG
Sbjct: 124 SDSINRDHTSRGLEAIAIDCEKVG 147


>ref|NP_001241345.1| uncharacterized protein LOC100788682 [Glycine max]
           gi|255641871|gb|ACU21204.1| unknown [Glycine max]
          Length = 366

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 35/87 (40%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
 Frame = -2

Query: 253 GPLPKESCAKTFSSLGCDLCLKVFDDTDVLSAHESSCRLDPAIIPELPGMLSLETCDVEV 74
           GPLP+  C+K FS  GC LCL +FD    L  H  +CRL     P  PG  +L   D + 
Sbjct: 65  GPLPRGICSKIFSQQGCQLCLALFDSPGSLIGHRETCRLS---APTCPGTSALPYIDSQF 121

Query: 73  SSLTVADANEQGP---EVVALDCELVG 2
                +D N  G      VA+DCE+VG
Sbjct: 122 DCQDSSDENHAGEGPGGAVAIDCEMVG 148


>ref|XP_003546666.1| PREDICTED: RNA exonuclease 4-like [Glycine max]
          Length = 366

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 34/87 (39%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
 Frame = -2

Query: 253 GPLPKESCAKTFSSLGCDLCLKVFDDTDVLSAHESSCRLDPAIIPELPGMLSLETCDVEV 74
           GPLP+  C+K FS  GC LCL +FD    L  H   CR+     P  PG  +L   D + 
Sbjct: 65  GPLPRGICSKIFSQQGCQLCLALFDSPGSLIDHRKICRIS---APTCPGTSALPYIDSQF 121

Query: 73  SSLTVADANEQGP---EVVALDCELVG 2
                +D N  G      VA+DCE+VG
Sbjct: 122 DCQDFSDENHAGEGPGGAVAMDCEMVG 148


>gb|ACU17968.1| unknown [Glycine max]
          Length = 241

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 34/87 (39%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
 Frame = -2

Query: 253 GPLPKESCAKTFSSLGCDLCLKVFDDTDVLSAHESSCRLDPAIIPELPGMLSLETCDVEV 74
           GPLP+  C+K FS  GC LCL +FD    L  H   CR+     P  PG  +L   D + 
Sbjct: 65  GPLPRGICSKIFSQQGCQLCLALFDSPGSLIDHRKICRIS---APTCPGTSALPYIDSQF 121

Query: 73  SSLTVADANEQGP---EVVALDCELVG 2
                +D N  G      VA+DCE+VG
Sbjct: 122 DCQDFSDENHAGEGPGGAVAMDCEMVG 148


>ref|XP_002524814.1| exonuclease, putative [Ricinus communis]
           gi|223535998|gb|EEF37657.1| exonuclease, putative
           [Ricinus communis]
          Length = 365

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 34/87 (39%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
 Frame = -2

Query: 253 GPLPKESCAKTFSSLGCDLCLKVFDDTDVLSAHESSCRLD-PAIIPELPGMLSLETCDVE 77
           GPL K +C++ FS LGCDLCLKVFD  + L  H   C L  P+   +L  +  L + D  
Sbjct: 66  GPLAKANCSRVFSHLGCDLCLKVFDSPNSLIRHREMCCLSTPSSFVKLQ-ICMLGSNDNY 124

Query: 76  VSSLTVADANEQGPEV--VALDCELVG 2
           +    +   +  G +V  +A+DCE+VG
Sbjct: 125 IGGGVIGSNDNIGGDVKAIAIDCEMVG 151


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