BLASTX nr result

ID: Dioscorea21_contig00008482 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00008482
         (611 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550308.1| PREDICTED: U-box domain-containing protein 4...   116   3e-24
ref|XP_003557013.1| PREDICTED: U-box domain-containing protein 4...   115   8e-24
ref|XP_004142891.1| PREDICTED: U-box domain-containing protein 4...   114   1e-23
ref|XP_003589079.1| U-box domain-containing protein [Medicago tr...   114   1e-23
ref|XP_002510099.1| E3 ubiquitin ligase PUB14, putative [Ricinus...   114   1e-23

>ref|XP_003550308.1| PREDICTED: U-box domain-containing protein 4-like [Glycine max]
          Length = 352

 Score =  116 bits (291), Expect = 3e-24
 Identities = 65/120 (54%), Positives = 79/120 (65%)
 Frame = -1

Query: 611 LEMMAETEGGMVDKAGCVLGXXXXXXXXXXXXXXXXGIPVLVEVVEIGTQRQKEIAASTL 432
           +E+MA+ E  MVDK+  V+                 G+PVLVE+VE+GTQRQKEIA   L
Sbjct: 230 VELMADFESNMVDKSAYVVSVLVAVPEARVALVEEGGVPVLVEIVEVGTQRQKEIAVVIL 289

Query: 431 LEICDGSSNXXXXXXXXXAYRALAVREGAIPPLVALSQSGTSRAKQKAEKLIELLRQPRT 252
           L++C+ S            YR +  REGAIPPLVALSQSGT+RAKQKAEKLIELLRQPR+
Sbjct: 290 LQVCEDSVT----------YRTMVAREGAIPPLVALSQSGTNRAKQKAEKLIELLRQPRS 339


>ref|XP_003557013.1| PREDICTED: U-box domain-containing protein 4-like [Glycine max]
          Length = 319

 Score =  115 bits (287), Expect = 8e-24
 Identities = 65/120 (54%), Positives = 79/120 (65%)
 Frame = -1

Query: 611 LEMMAETEGGMVDKAGCVLGXXXXXXXXXXXXXXXXGIPVLVEVVEIGTQRQKEIAASTL 432
           +E+MA+ E  MVDK+  V+                 G+PVLVE+VE+GTQRQKEI    L
Sbjct: 198 VELMADFESNMVDKSAYVVSVLVAVAEARAALVEEGGVPVLVEIVEVGTQRQKEIVVVIL 257

Query: 431 LEICDGSSNXXXXXXXXXAYRALAVREGAIPPLVALSQSGTSRAKQKAEKLIELLRQPRT 252
           L++C+ S           AYR +  REGAIPPLVALSQSGT+RAKQKAEKLIELLRQPR+
Sbjct: 258 LQVCEDS----------VAYRTMVAREGAIPPLVALSQSGTNRAKQKAEKLIELLRQPRS 307


>ref|XP_004142891.1| PREDICTED: U-box domain-containing protein 4-like [Cucumis sativus]
           gi|449482708|ref|XP_004156379.1| PREDICTED: U-box
           domain-containing protein 4-like [Cucumis sativus]
          Length = 352

 Score =  114 bits (285), Expect = 1e-23
 Identities = 68/120 (56%), Positives = 78/120 (65%)
 Frame = -1

Query: 611 LEMMAETEGGMVDKAGCVLGXXXXXXXXXXXXXXXXGIPVLVEVVEIGTQRQKEIAASTL 432
           +E+MA+    MVDK+  VL                 GIPVLVE+VE GTQRQKEIAA  L
Sbjct: 231 VELMADFGSNMVDKSAFVLSVLVSMSEARSALVEEGGIPVLVELVEDGTQRQKEIAAVIL 290

Query: 431 LEICDGSSNXXXXXXXXXAYRALAVREGAIPPLVALSQSGTSRAKQKAEKLIELLRQPRT 252
           L+IC+ S            YR +  REGAIPPLVALSQSGT+RAKQKAEKLIELLRQPR+
Sbjct: 291 LQICEDS----------VLYRTMVAREGAIPPLVALSQSGTNRAKQKAEKLIELLRQPRS 340


>ref|XP_003589079.1| U-box domain-containing protein [Medicago truncatula]
           gi|355478127|gb|AES59330.1| U-box domain-containing
           protein [Medicago truncatula]
          Length = 336

 Score =  114 bits (285), Expect = 1e-23
 Identities = 66/120 (55%), Positives = 81/120 (67%)
 Frame = -1

Query: 611 LEMMAETEGGMVDKAGCVLGXXXXXXXXXXXXXXXXGIPVLVEVVEIGTQRQKEIAASTL 432
           +E+MA+ E  MVDK+  VL                 G+PVLVE+VE+G+QRQKEIAA  L
Sbjct: 222 VELMADFESNMVDKSAYVLSVLVSVPEAKVALVEEGGVPVLVEIVEVGSQRQKEIAAVIL 281

Query: 431 LEICDGSSNXXXXXXXXXAYRALAVREGAIPPLVALSQSGTSRAKQKAEKLIELLRQPRT 252
           L+IC+ S           A R++  REGAIPPLVAL+QSGT+RAKQKAEKLIELLRQPR+
Sbjct: 282 LQICEDS----------VAVRSMVAREGAIPPLVALTQSGTNRAKQKAEKLIELLRQPRS 331


>ref|XP_002510099.1| E3 ubiquitin ligase PUB14, putative [Ricinus communis]
           gi|223550800|gb|EEF52286.1| E3 ubiquitin ligase PUB14,
           putative [Ricinus communis]
          Length = 352

 Score =  114 bits (285), Expect = 1e-23
 Identities = 67/129 (51%), Positives = 84/129 (65%), Gaps = 1/129 (0%)
 Frame = -1

Query: 611 LEMMAETEGGMVDKAGCVLGXXXXXXXXXXXXXXXXGIPVLVEVVEIGTQRQKEIAASTL 432
           +E+MA+ E  MVDK+  VL                 GIPVLVE++E+G+QRQKEIA + L
Sbjct: 231 VELMADFESNMVDKSAFVLSLLVSVTEARTALVEEGGIPVLVEIIEVGSQRQKEIAVAIL 290

Query: 431 LEICDGSSNXXXXXXXXXAYRALAVREGAIPPLVALSQSGTSRAKQKAEKLIELLRQPRT 252
           L+IC+ +             RA+ VREGAIPPL+ALSQSGT+RAKQKAE LI+LLRQPR+
Sbjct: 291 LQICEDN----------LMRRAMVVREGAIPPLIALSQSGTNRAKQKAETLIDLLRQPRS 340

Query: 251 A-AAGRVVD 228
             AA R  D
Sbjct: 341 GNAAARTPD 349


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