BLASTX nr result
ID: Dioscorea21_contig00008482
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00008482 (611 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003550308.1| PREDICTED: U-box domain-containing protein 4... 116 3e-24 ref|XP_003557013.1| PREDICTED: U-box domain-containing protein 4... 115 8e-24 ref|XP_004142891.1| PREDICTED: U-box domain-containing protein 4... 114 1e-23 ref|XP_003589079.1| U-box domain-containing protein [Medicago tr... 114 1e-23 ref|XP_002510099.1| E3 ubiquitin ligase PUB14, putative [Ricinus... 114 1e-23 >ref|XP_003550308.1| PREDICTED: U-box domain-containing protein 4-like [Glycine max] Length = 352 Score = 116 bits (291), Expect = 3e-24 Identities = 65/120 (54%), Positives = 79/120 (65%) Frame = -1 Query: 611 LEMMAETEGGMVDKAGCVLGXXXXXXXXXXXXXXXXGIPVLVEVVEIGTQRQKEIAASTL 432 +E+MA+ E MVDK+ V+ G+PVLVE+VE+GTQRQKEIA L Sbjct: 230 VELMADFESNMVDKSAYVVSVLVAVPEARVALVEEGGVPVLVEIVEVGTQRQKEIAVVIL 289 Query: 431 LEICDGSSNXXXXXXXXXAYRALAVREGAIPPLVALSQSGTSRAKQKAEKLIELLRQPRT 252 L++C+ S YR + REGAIPPLVALSQSGT+RAKQKAEKLIELLRQPR+ Sbjct: 290 LQVCEDSVT----------YRTMVAREGAIPPLVALSQSGTNRAKQKAEKLIELLRQPRS 339 >ref|XP_003557013.1| PREDICTED: U-box domain-containing protein 4-like [Glycine max] Length = 319 Score = 115 bits (287), Expect = 8e-24 Identities = 65/120 (54%), Positives = 79/120 (65%) Frame = -1 Query: 611 LEMMAETEGGMVDKAGCVLGXXXXXXXXXXXXXXXXGIPVLVEVVEIGTQRQKEIAASTL 432 +E+MA+ E MVDK+ V+ G+PVLVE+VE+GTQRQKEI L Sbjct: 198 VELMADFESNMVDKSAYVVSVLVAVAEARAALVEEGGVPVLVEIVEVGTQRQKEIVVVIL 257 Query: 431 LEICDGSSNXXXXXXXXXAYRALAVREGAIPPLVALSQSGTSRAKQKAEKLIELLRQPRT 252 L++C+ S AYR + REGAIPPLVALSQSGT+RAKQKAEKLIELLRQPR+ Sbjct: 258 LQVCEDS----------VAYRTMVAREGAIPPLVALSQSGTNRAKQKAEKLIELLRQPRS 307 >ref|XP_004142891.1| PREDICTED: U-box domain-containing protein 4-like [Cucumis sativus] gi|449482708|ref|XP_004156379.1| PREDICTED: U-box domain-containing protein 4-like [Cucumis sativus] Length = 352 Score = 114 bits (285), Expect = 1e-23 Identities = 68/120 (56%), Positives = 78/120 (65%) Frame = -1 Query: 611 LEMMAETEGGMVDKAGCVLGXXXXXXXXXXXXXXXXGIPVLVEVVEIGTQRQKEIAASTL 432 +E+MA+ MVDK+ VL GIPVLVE+VE GTQRQKEIAA L Sbjct: 231 VELMADFGSNMVDKSAFVLSVLVSMSEARSALVEEGGIPVLVELVEDGTQRQKEIAAVIL 290 Query: 431 LEICDGSSNXXXXXXXXXAYRALAVREGAIPPLVALSQSGTSRAKQKAEKLIELLRQPRT 252 L+IC+ S YR + REGAIPPLVALSQSGT+RAKQKAEKLIELLRQPR+ Sbjct: 291 LQICEDS----------VLYRTMVAREGAIPPLVALSQSGTNRAKQKAEKLIELLRQPRS 340 >ref|XP_003589079.1| U-box domain-containing protein [Medicago truncatula] gi|355478127|gb|AES59330.1| U-box domain-containing protein [Medicago truncatula] Length = 336 Score = 114 bits (285), Expect = 1e-23 Identities = 66/120 (55%), Positives = 81/120 (67%) Frame = -1 Query: 611 LEMMAETEGGMVDKAGCVLGXXXXXXXXXXXXXXXXGIPVLVEVVEIGTQRQKEIAASTL 432 +E+MA+ E MVDK+ VL G+PVLVE+VE+G+QRQKEIAA L Sbjct: 222 VELMADFESNMVDKSAYVLSVLVSVPEAKVALVEEGGVPVLVEIVEVGSQRQKEIAAVIL 281 Query: 431 LEICDGSSNXXXXXXXXXAYRALAVREGAIPPLVALSQSGTSRAKQKAEKLIELLRQPRT 252 L+IC+ S A R++ REGAIPPLVAL+QSGT+RAKQKAEKLIELLRQPR+ Sbjct: 282 LQICEDS----------VAVRSMVAREGAIPPLVALTQSGTNRAKQKAEKLIELLRQPRS 331 >ref|XP_002510099.1| E3 ubiquitin ligase PUB14, putative [Ricinus communis] gi|223550800|gb|EEF52286.1| E3 ubiquitin ligase PUB14, putative [Ricinus communis] Length = 352 Score = 114 bits (285), Expect = 1e-23 Identities = 67/129 (51%), Positives = 84/129 (65%), Gaps = 1/129 (0%) Frame = -1 Query: 611 LEMMAETEGGMVDKAGCVLGXXXXXXXXXXXXXXXXGIPVLVEVVEIGTQRQKEIAASTL 432 +E+MA+ E MVDK+ VL GIPVLVE++E+G+QRQKEIA + L Sbjct: 231 VELMADFESNMVDKSAFVLSLLVSVTEARTALVEEGGIPVLVEIIEVGSQRQKEIAVAIL 290 Query: 431 LEICDGSSNXXXXXXXXXAYRALAVREGAIPPLVALSQSGTSRAKQKAEKLIELLRQPRT 252 L+IC+ + RA+ VREGAIPPL+ALSQSGT+RAKQKAE LI+LLRQPR+ Sbjct: 291 LQICEDN----------LMRRAMVVREGAIPPLIALSQSGTNRAKQKAETLIDLLRQPRS 340 Query: 251 A-AAGRVVD 228 AA R D Sbjct: 341 GNAAARTPD 349