BLASTX nr result

ID: Dioscorea21_contig00008452 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00008452
         (714 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267858.1| PREDICTED: ubiquitin domain-containing prote...   196   4e-48
ref|XP_002285516.1| PREDICTED: ubiquitin domain-containing prote...   196   4e-48
ref|XP_004146021.1| PREDICTED: ubiquitin domain-containing prote...   193   3e-47
ref|XP_002317449.1| predicted protein [Populus trichocarpa] gi|2...   192   7e-47
gb|AFK44107.1| unknown [Lotus japonicus]                              191   1e-46

>ref|XP_002267858.1| PREDICTED: ubiquitin domain-containing protein 1 [Vitis vinifera]
           gi|297740542|emb|CBI30724.3| unnamed protein product
           [Vitis vinifera]
          Length = 114

 Score =  196 bits (498), Expect = 4e-48
 Identities = 88/114 (77%), Positives = 104/114 (91%)
 Frame = +3

Query: 111 MGCATSSANKGEENTKKLRKPKPWKNTQPITRTELMRMRDEFWDTAPHYGGQKEIWDALR 290
           MGC  SS  KG+E++KK+R+PKPWK++Q +TRT+L +MRDEFWDTAPHYGGQKEIWDALR
Sbjct: 1   MGCTGSSRAKGDESSKKIRRPKPWKHSQALTRTQLKQMRDEFWDTAPHYGGQKEIWDALR 60

Query: 291 VAAESELSLAQTIIDSAGIIVSSADMTTCYDERGAKYELPKYVLSEPTNLIRDN 452
            A E++L+LAQ I+DSAG+IV SAD+TTCYDERGAKYELPKYVLSEPTNLIRDN
Sbjct: 61  AATEADLTLAQAIVDSAGVIVQSADLTTCYDERGAKYELPKYVLSEPTNLIRDN 114


>ref|XP_002285516.1| PREDICTED: ubiquitin domain-containing protein 1 [Vitis vinifera]
           gi|147767244|emb|CAN66729.1| hypothetical protein
           VITISV_025684 [Vitis vinifera]
           gi|302142875|emb|CBI20170.3| unnamed protein product
           [Vitis vinifera]
          Length = 114

 Score =  196 bits (498), Expect = 4e-48
 Identities = 89/113 (78%), Positives = 101/113 (89%)
 Frame = +3

Query: 111 MGCATSSANKGEENTKKLRKPKPWKNTQPITRTELMRMRDEFWDTAPHYGGQKEIWDALR 290
           MGCA SS  KG+   KK+RKPKPWKN QP+T+T+LM+MRDEFWDTAPHYGGQKEIWDALR
Sbjct: 1   MGCAGSSQTKGDGTVKKIRKPKPWKNPQPLTKTQLMQMRDEFWDTAPHYGGQKEIWDALR 60

Query: 291 VAAESELSLAQTIIDSAGIIVSSADMTTCYDERGAKYELPKYVLSEPTNLIRD 449
            AAE++L+LAQ I+DSAG+IV SAD+T CYDERGAKYELP YVLSEPTNLIRD
Sbjct: 61  AAAEADLTLAQAIVDSAGVIVQSADLTICYDERGAKYELPHYVLSEPTNLIRD 113


>ref|XP_004146021.1| PREDICTED: ubiquitin domain-containing protein 1-like [Cucumis
           sativus] gi|449518063|ref|XP_004166063.1| PREDICTED:
           ubiquitin domain-containing protein 1-like [Cucumis
           sativus]
          Length = 111

 Score =  193 bits (490), Expect = 3e-47
 Identities = 88/111 (79%), Positives = 101/111 (90%)
 Frame = +3

Query: 111 MGCATSSANKGEENTKKLRKPKPWKNTQPITRTELMRMRDEFWDTAPHYGGQKEIWDALR 290
           MGCA SS  KG+ + KK+RKPKPWKN QPIT+T+L+RMRDEFWDTAPHYGG+KEIWDALR
Sbjct: 1   MGCAGSSQAKGDGSVKKIRKPKPWKNPQPITKTDLVRMRDEFWDTAPHYGGRKEIWDALR 60

Query: 291 VAAESELSLAQTIIDSAGIIVSSADMTTCYDERGAKYELPKYVLSEPTNLI 443
            AAE++L+LAQ I+DSAGIIV SAD+T CYDERGAKYELPKYVLSEPTNL+
Sbjct: 61  AAAEADLTLAQAIVDSAGIIVQSADLTICYDERGAKYELPKYVLSEPTNLV 111


>ref|XP_002317449.1| predicted protein [Populus trichocarpa] gi|222860514|gb|EEE98061.1|
           predicted protein [Populus trichocarpa]
          Length = 114

 Score =  192 bits (487), Expect = 7e-47
 Identities = 87/113 (76%), Positives = 102/113 (90%)
 Frame = +3

Query: 111 MGCATSSANKGEENTKKLRKPKPWKNTQPITRTELMRMRDEFWDTAPHYGGQKEIWDALR 290
           MGCA SS  K + N KK+RKPKPWK+ QPIT+++LM+MRDEFWDTAPHYGG+KEIWDALR
Sbjct: 1   MGCAGSSQAKSDGNVKKIRKPKPWKHPQPITKSQLMQMRDEFWDTAPHYGGRKEIWDALR 60

Query: 291 VAAESELSLAQTIIDSAGIIVSSADMTTCYDERGAKYELPKYVLSEPTNLIRD 449
            AA++ELSLAQ I+DSAG+IV +AD+T CYDERGAKYELPKYVLSEPTNLIR+
Sbjct: 61  AAADAELSLAQAIVDSAGVIVQNADLTICYDERGAKYELPKYVLSEPTNLIRE 113


>gb|AFK44107.1| unknown [Lotus japonicus]
          Length = 114

 Score =  191 bits (486), Expect = 1e-46
 Identities = 86/114 (75%), Positives = 103/114 (90%)
 Frame = +3

Query: 111 MGCATSSANKGEENTKKLRKPKPWKNTQPITRTELMRMRDEFWDTAPHYGGQKEIWDALR 290
           MGCA SS +K +   KK+RKPKPWK+ QPITRT+L+++RDEFWDTAPHYGG+KEIWDALR
Sbjct: 1   MGCAGSSQSKADGTEKKIRKPKPWKHPQPITRTQLIQLRDEFWDTAPHYGGRKEIWDALR 60

Query: 291 VAAESELSLAQTIIDSAGIIVSSADMTTCYDERGAKYELPKYVLSEPTNLIRDN 452
            AAE++L+LAQ I+DSAG+IV S+D+T CYDERGAKYELPKYVLSEPTNLIRD+
Sbjct: 61  AAAEADLTLAQAIVDSAGVIVQSSDLTVCYDERGAKYELPKYVLSEPTNLIRDD 114


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