BLASTX nr result

ID: Dioscorea21_contig00008450 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00008450
         (887 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001238052.1| uncharacterized protein LOC100306643 [Glycin...   276   4e-72
ref|XP_002319267.1| predicted protein [Populus trichocarpa] gi|1...   276   4e-72
emb|CBI20486.3| unnamed protein product [Vitis vinifera]              271   1e-70
ref|XP_002282889.1| PREDICTED: 50S ribosomal protein L24, chloro...   271   1e-70
ref|XP_003596594.1| 50S ribosomal protein L24 [Medicago truncatu...   271   2e-70

>ref|NP_001238052.1| uncharacterized protein LOC100306643 [Glycine max]
           gi|255629161|gb|ACU14925.1| unknown [Glycine max]
          Length = 194

 Score =  276 bits (707), Expect = 4e-72
 Identities = 135/180 (75%), Positives = 160/180 (88%), Gaps = 3/180 (1%)
 Frame = -1

Query: 803 MAAIASLQSAMVSLSLNSTSFFGQRLSFPL---SNSPSKATDKPCQIVMKLKRWERKECK 633
           MAA+A+LQS+MV LSL+S SF GQRLS P+   S  P K+T+K C IVM+LKRWERKECK
Sbjct: 1   MAAMAALQSSMVGLSLSSNSFLGQRLS-PITLPSLLPGKSTEKQCPIVMRLKRWERKECK 59

Query: 632 PNSLPVLHKMHVKVGDTVQVISGSEKGKIGEITSIFRHNSTVIIKDMNLKTKHMKSREQG 453
           PNSLP+LHKMHVK+GDTVQVISG E+GK+GEIT IF+HNSTVI+KD+NLKTKH+KSRE+G
Sbjct: 60  PNSLPILHKMHVKLGDTVQVISGRERGKVGEITKIFKHNSTVIVKDLNLKTKHVKSREEG 119

Query: 452 EPGQIVKIEAVIHSSNVMLYSKEQNVASRVGHKILDDGSRVRYLVKTGEIIDSPEKWKRV 273
           EPGQI+KIE  IHSSNVMLYSK+Q VASRVGHK+LD+G +VRYL+KTGEIIDS E WK++
Sbjct: 120 EPGQIIKIEGPIHSSNVMLYSKDQKVASRVGHKVLDNGKKVRYLIKTGEIIDSAENWKKL 179


>ref|XP_002319267.1| predicted protein [Populus trichocarpa] gi|118484624|gb|ABK94184.1|
           unknown [Populus trichocarpa]
           gi|222857643|gb|EEE95190.1| predicted protein [Populus
           trichocarpa]
          Length = 194

 Score =  276 bits (707), Expect = 4e-72
 Identities = 134/179 (74%), Positives = 162/179 (90%), Gaps = 2/179 (1%)
 Frame = -1

Query: 803 MAAIASLQSAMVSLSLNST-SFFGQRLSFPLSNSPS-KATDKPCQIVMKLKRWERKECKP 630
           MAA+A+LQS+M +LSL+S+ SFFGQRLS P  + P  K+ +KPC IV+K+KRWERKECK 
Sbjct: 1   MAAMAALQSSMATLSLSSSNSFFGQRLSLPSLSFPQVKSPEKPCLIVVKIKRWERKECKE 60

Query: 629 NSLPVLHKMHVKVGDTVQVISGSEKGKIGEITSIFRHNSTVIIKDMNLKTKHMKSREQGE 450
           NSLPVLHKMHVKVGDT+QVI+G +KGKIGEIT IFRHNSTV++K++NLKTKH+KSRE+GE
Sbjct: 61  NSLPVLHKMHVKVGDTIQVIAGDDKGKIGEITKIFRHNSTVVVKEINLKTKHVKSREEGE 120

Query: 449 PGQIVKIEAVIHSSNVMLYSKEQNVASRVGHKILDDGSRVRYLVKTGEIIDSPEKWKRV 273
           PGQI+KIEA IHSSNVMLYSKE+N+ASRVGHK+LDDG +VRYL+KTGEIID+ E WK+V
Sbjct: 121 PGQIIKIEAPIHSSNVMLYSKEKNIASRVGHKVLDDGKKVRYLIKTGEIIDNAEGWKKV 179


>emb|CBI20486.3| unnamed protein product [Vitis vinifera]
          Length = 236

 Score =  271 bits (694), Expect = 1e-70
 Identities = 133/177 (75%), Positives = 155/177 (87%)
 Frame = -1

Query: 803 MAAIASLQSAMVSLSLNSTSFFGQRLSFPLSNSPSKATDKPCQIVMKLKRWERKECKPNS 624
           MAA+A+LQS+  SLSL+S SF GQ  S  L  S +K+T+KPC IVM+LKRWERKECKPNS
Sbjct: 46  MAAMAALQSSFTSLSLSSNSFLGQPFSPLLYPSLAKSTEKPCPIVMRLKRWERKECKPNS 105

Query: 623 LPVLHKMHVKVGDTVQVISGSEKGKIGEITSIFRHNSTVIIKDMNLKTKHMKSREQGEPG 444
           LPVLHKMHVKVGDTV++ISG EKG+ GEI+ IFRHNSTV++KD+NLKTKH+K R + EPG
Sbjct: 106 LPVLHKMHVKVGDTVKIISGREKGRTGEISKIFRHNSTVVVKDINLKTKHVKGRGEDEPG 165

Query: 443 QIVKIEAVIHSSNVMLYSKEQNVASRVGHKILDDGSRVRYLVKTGEIIDSPEKWKRV 273
           QI+KIEA IHSSNVMLYSKEQNVASRVGHKIL++G RVRYL+KTGEIIDS E W+RV
Sbjct: 166 QIIKIEAPIHSSNVMLYSKEQNVASRVGHKILENGKRVRYLIKTGEIIDSAENWERV 222


>ref|XP_002282889.1| PREDICTED: 50S ribosomal protein L24, chloroplastic isoform 1
           [Vitis vinifera] gi|359493940|ref|XP_003634697.1|
           PREDICTED: 50S ribosomal protein L24, chloroplastic
           isoform 2 [Vitis vinifera]
           gi|359493942|ref|XP_003634698.1| PREDICTED: 50S
           ribosomal protein L24, chloroplastic isoform 3 [Vitis
           vinifera] gi|147860928|emb|CAN78749.1| hypothetical
           protein VITISV_002445 [Vitis vinifera]
          Length = 191

 Score =  271 bits (694), Expect = 1e-70
 Identities = 133/177 (75%), Positives = 155/177 (87%)
 Frame = -1

Query: 803 MAAIASLQSAMVSLSLNSTSFFGQRLSFPLSNSPSKATDKPCQIVMKLKRWERKECKPNS 624
           MAA+A+LQS+  SLSL+S SF GQ  S  L  S +K+T+KPC IVM+LKRWERKECKPNS
Sbjct: 1   MAAMAALQSSFTSLSLSSNSFLGQPFSPLLYPSLAKSTEKPCPIVMRLKRWERKECKPNS 60

Query: 623 LPVLHKMHVKVGDTVQVISGSEKGKIGEITSIFRHNSTVIIKDMNLKTKHMKSREQGEPG 444
           LPVLHKMHVKVGDTV++ISG EKG+ GEI+ IFRHNSTV++KD+NLKTKH+K R + EPG
Sbjct: 61  LPVLHKMHVKVGDTVKIISGREKGRTGEISKIFRHNSTVVVKDINLKTKHVKGRGEDEPG 120

Query: 443 QIVKIEAVIHSSNVMLYSKEQNVASRVGHKILDDGSRVRYLVKTGEIIDSPEKWKRV 273
           QI+KIEA IHSSNVMLYSKEQNVASRVGHKIL++G RVRYL+KTGEIIDS E W+RV
Sbjct: 121 QIIKIEAPIHSSNVMLYSKEQNVASRVGHKILENGKRVRYLIKTGEIIDSAENWERV 177


>ref|XP_003596594.1| 50S ribosomal protein L24 [Medicago truncatula]
           gi|355485642|gb|AES66845.1| 50S ribosomal protein L24
           [Medicago truncatula] gi|388513937|gb|AFK45030.1|
           unknown [Medicago truncatula]
          Length = 194

 Score =  271 bits (692), Expect = 2e-70
 Identities = 132/178 (74%), Positives = 158/178 (88%), Gaps = 3/178 (1%)
 Frame = -1

Query: 797 AIASLQSAMVSLSLNSTSFFGQRLSFPLSNSP---SKATDKPCQIVMKLKRWERKECKPN 627
           A+ASLQS+M SLSL+S SFFGQ LS P++ SP    K TDK C+IVMKLKRWERKECKPN
Sbjct: 5   AMASLQSSMTSLSLSSNSFFGQPLS-PITLSPLLPGKPTDKQCRIVMKLKRWERKECKPN 63

Query: 626 SLPVLHKMHVKVGDTVQVISGSEKGKIGEITSIFRHNSTVIIKDMNLKTKHMKSREQGEP 447
           SLPVLHK+HVKVGDTV+VISG EKG+IGE+T IF+HNST+I+KD+NLKTKH+KSR++GEP
Sbjct: 64  SLPVLHKLHVKVGDTVKVISGHEKGQIGEVTKIFKHNSTIIVKDINLKTKHVKSRQEGEP 123

Query: 446 GQIVKIEAVIHSSNVMLYSKEQNVASRVGHKILDDGSRVRYLVKTGEIIDSPEKWKRV 273
           GQI KIE  IHSSNVMLYSKE+NV SRVGHK++D+G +VRYL+KTGE+IDS E WK++
Sbjct: 124 GQINKIEGPIHSSNVMLYSKEKNVVSRVGHKVIDNGKKVRYLIKTGEVIDSVENWKKL 181


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