BLASTX nr result
ID: Dioscorea21_contig00008450
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00008450 (887 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_001238052.1| uncharacterized protein LOC100306643 [Glycin... 276 4e-72 ref|XP_002319267.1| predicted protein [Populus trichocarpa] gi|1... 276 4e-72 emb|CBI20486.3| unnamed protein product [Vitis vinifera] 271 1e-70 ref|XP_002282889.1| PREDICTED: 50S ribosomal protein L24, chloro... 271 1e-70 ref|XP_003596594.1| 50S ribosomal protein L24 [Medicago truncatu... 271 2e-70 >ref|NP_001238052.1| uncharacterized protein LOC100306643 [Glycine max] gi|255629161|gb|ACU14925.1| unknown [Glycine max] Length = 194 Score = 276 bits (707), Expect = 4e-72 Identities = 135/180 (75%), Positives = 160/180 (88%), Gaps = 3/180 (1%) Frame = -1 Query: 803 MAAIASLQSAMVSLSLNSTSFFGQRLSFPL---SNSPSKATDKPCQIVMKLKRWERKECK 633 MAA+A+LQS+MV LSL+S SF GQRLS P+ S P K+T+K C IVM+LKRWERKECK Sbjct: 1 MAAMAALQSSMVGLSLSSNSFLGQRLS-PITLPSLLPGKSTEKQCPIVMRLKRWERKECK 59 Query: 632 PNSLPVLHKMHVKVGDTVQVISGSEKGKIGEITSIFRHNSTVIIKDMNLKTKHMKSREQG 453 PNSLP+LHKMHVK+GDTVQVISG E+GK+GEIT IF+HNSTVI+KD+NLKTKH+KSRE+G Sbjct: 60 PNSLPILHKMHVKLGDTVQVISGRERGKVGEITKIFKHNSTVIVKDLNLKTKHVKSREEG 119 Query: 452 EPGQIVKIEAVIHSSNVMLYSKEQNVASRVGHKILDDGSRVRYLVKTGEIIDSPEKWKRV 273 EPGQI+KIE IHSSNVMLYSK+Q VASRVGHK+LD+G +VRYL+KTGEIIDS E WK++ Sbjct: 120 EPGQIIKIEGPIHSSNVMLYSKDQKVASRVGHKVLDNGKKVRYLIKTGEIIDSAENWKKL 179 >ref|XP_002319267.1| predicted protein [Populus trichocarpa] gi|118484624|gb|ABK94184.1| unknown [Populus trichocarpa] gi|222857643|gb|EEE95190.1| predicted protein [Populus trichocarpa] Length = 194 Score = 276 bits (707), Expect = 4e-72 Identities = 134/179 (74%), Positives = 162/179 (90%), Gaps = 2/179 (1%) Frame = -1 Query: 803 MAAIASLQSAMVSLSLNST-SFFGQRLSFPLSNSPS-KATDKPCQIVMKLKRWERKECKP 630 MAA+A+LQS+M +LSL+S+ SFFGQRLS P + P K+ +KPC IV+K+KRWERKECK Sbjct: 1 MAAMAALQSSMATLSLSSSNSFFGQRLSLPSLSFPQVKSPEKPCLIVVKIKRWERKECKE 60 Query: 629 NSLPVLHKMHVKVGDTVQVISGSEKGKIGEITSIFRHNSTVIIKDMNLKTKHMKSREQGE 450 NSLPVLHKMHVKVGDT+QVI+G +KGKIGEIT IFRHNSTV++K++NLKTKH+KSRE+GE Sbjct: 61 NSLPVLHKMHVKVGDTIQVIAGDDKGKIGEITKIFRHNSTVVVKEINLKTKHVKSREEGE 120 Query: 449 PGQIVKIEAVIHSSNVMLYSKEQNVASRVGHKILDDGSRVRYLVKTGEIIDSPEKWKRV 273 PGQI+KIEA IHSSNVMLYSKE+N+ASRVGHK+LDDG +VRYL+KTGEIID+ E WK+V Sbjct: 121 PGQIIKIEAPIHSSNVMLYSKEKNIASRVGHKVLDDGKKVRYLIKTGEIIDNAEGWKKV 179 >emb|CBI20486.3| unnamed protein product [Vitis vinifera] Length = 236 Score = 271 bits (694), Expect = 1e-70 Identities = 133/177 (75%), Positives = 155/177 (87%) Frame = -1 Query: 803 MAAIASLQSAMVSLSLNSTSFFGQRLSFPLSNSPSKATDKPCQIVMKLKRWERKECKPNS 624 MAA+A+LQS+ SLSL+S SF GQ S L S +K+T+KPC IVM+LKRWERKECKPNS Sbjct: 46 MAAMAALQSSFTSLSLSSNSFLGQPFSPLLYPSLAKSTEKPCPIVMRLKRWERKECKPNS 105 Query: 623 LPVLHKMHVKVGDTVQVISGSEKGKIGEITSIFRHNSTVIIKDMNLKTKHMKSREQGEPG 444 LPVLHKMHVKVGDTV++ISG EKG+ GEI+ IFRHNSTV++KD+NLKTKH+K R + EPG Sbjct: 106 LPVLHKMHVKVGDTVKIISGREKGRTGEISKIFRHNSTVVVKDINLKTKHVKGRGEDEPG 165 Query: 443 QIVKIEAVIHSSNVMLYSKEQNVASRVGHKILDDGSRVRYLVKTGEIIDSPEKWKRV 273 QI+KIEA IHSSNVMLYSKEQNVASRVGHKIL++G RVRYL+KTGEIIDS E W+RV Sbjct: 166 QIIKIEAPIHSSNVMLYSKEQNVASRVGHKILENGKRVRYLIKTGEIIDSAENWERV 222 >ref|XP_002282889.1| PREDICTED: 50S ribosomal protein L24, chloroplastic isoform 1 [Vitis vinifera] gi|359493940|ref|XP_003634697.1| PREDICTED: 50S ribosomal protein L24, chloroplastic isoform 2 [Vitis vinifera] gi|359493942|ref|XP_003634698.1| PREDICTED: 50S ribosomal protein L24, chloroplastic isoform 3 [Vitis vinifera] gi|147860928|emb|CAN78749.1| hypothetical protein VITISV_002445 [Vitis vinifera] Length = 191 Score = 271 bits (694), Expect = 1e-70 Identities = 133/177 (75%), Positives = 155/177 (87%) Frame = -1 Query: 803 MAAIASLQSAMVSLSLNSTSFFGQRLSFPLSNSPSKATDKPCQIVMKLKRWERKECKPNS 624 MAA+A+LQS+ SLSL+S SF GQ S L S +K+T+KPC IVM+LKRWERKECKPNS Sbjct: 1 MAAMAALQSSFTSLSLSSNSFLGQPFSPLLYPSLAKSTEKPCPIVMRLKRWERKECKPNS 60 Query: 623 LPVLHKMHVKVGDTVQVISGSEKGKIGEITSIFRHNSTVIIKDMNLKTKHMKSREQGEPG 444 LPVLHKMHVKVGDTV++ISG EKG+ GEI+ IFRHNSTV++KD+NLKTKH+K R + EPG Sbjct: 61 LPVLHKMHVKVGDTVKIISGREKGRTGEISKIFRHNSTVVVKDINLKTKHVKGRGEDEPG 120 Query: 443 QIVKIEAVIHSSNVMLYSKEQNVASRVGHKILDDGSRVRYLVKTGEIIDSPEKWKRV 273 QI+KIEA IHSSNVMLYSKEQNVASRVGHKIL++G RVRYL+KTGEIIDS E W+RV Sbjct: 121 QIIKIEAPIHSSNVMLYSKEQNVASRVGHKILENGKRVRYLIKTGEIIDSAENWERV 177 >ref|XP_003596594.1| 50S ribosomal protein L24 [Medicago truncatula] gi|355485642|gb|AES66845.1| 50S ribosomal protein L24 [Medicago truncatula] gi|388513937|gb|AFK45030.1| unknown [Medicago truncatula] Length = 194 Score = 271 bits (692), Expect = 2e-70 Identities = 132/178 (74%), Positives = 158/178 (88%), Gaps = 3/178 (1%) Frame = -1 Query: 797 AIASLQSAMVSLSLNSTSFFGQRLSFPLSNSP---SKATDKPCQIVMKLKRWERKECKPN 627 A+ASLQS+M SLSL+S SFFGQ LS P++ SP K TDK C+IVMKLKRWERKECKPN Sbjct: 5 AMASLQSSMTSLSLSSNSFFGQPLS-PITLSPLLPGKPTDKQCRIVMKLKRWERKECKPN 63 Query: 626 SLPVLHKMHVKVGDTVQVISGSEKGKIGEITSIFRHNSTVIIKDMNLKTKHMKSREQGEP 447 SLPVLHK+HVKVGDTV+VISG EKG+IGE+T IF+HNST+I+KD+NLKTKH+KSR++GEP Sbjct: 64 SLPVLHKLHVKVGDTVKVISGHEKGQIGEVTKIFKHNSTIIVKDINLKTKHVKSRQEGEP 123 Query: 446 GQIVKIEAVIHSSNVMLYSKEQNVASRVGHKILDDGSRVRYLVKTGEIIDSPEKWKRV 273 GQI KIE IHSSNVMLYSKE+NV SRVGHK++D+G +VRYL+KTGE+IDS E WK++ Sbjct: 124 GQINKIEGPIHSSNVMLYSKEKNVVSRVGHKVIDNGKKVRYLIKTGEVIDSVENWKKL 181