BLASTX nr result

ID: Dioscorea21_contig00008420 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00008420
         (919 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ95609.1| predicted protein [Hordeum vulgare subsp. vulgare]    145   1e-32
tpg|DAA48058.1| TPA: hypothetical protein ZEAMMB73_453573 [Zea m...   145   2e-32
gb|AFW61176.1| zn-finger, RanBP-type, containing protein, partia...   145   2e-32
gb|ACG42397.1| Zn-finger, RanBP-type, containing protein [Zea mays]   145   2e-32
gb|ACG34661.1| Zn-finger, RanBP-type, containing protein [Zea mays]   145   2e-32

>dbj|BAJ95609.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 293

 Score =  145 bits (366), Expect = 1e-32
 Identities = 66/129 (51%), Positives = 81/129 (62%)
 Frame = -3

Query: 917 GRDNDWTCPNCGNNNFSFRTVCNMRKCSTPRPGSQGSKADNXXXXXXXXXXXXXXXXXXX 738
           GRDNDW CPNC N NF+FRTVCNMRKC+TPRP +QGSK                      
Sbjct: 190 GRDNDWKCPNCNNINFAFRTVCNMRKCNTPRPDTQGSK---------------------- 227

Query: 737 XXXXXADNSKGSKPNMPEGSWKCEKCNNINFPFRMKCNRQNCGAQRPHDSNATHGLTSDE 558
                 D+S+ SKP  PEGSWKCEKCNNIN+PFR KCNR +CG ++P  +N+   L +D+
Sbjct: 228 -----PDSSRASKPKTPEGSWKCEKCNNINYPFRTKCNRPSCGEEKPLQANSPDDLATDQ 282

Query: 557 DDQ*VLEHL 531
           D+Q    H+
Sbjct: 283 DNQVEARHV 291


>tpg|DAA48058.1| TPA: hypothetical protein ZEAMMB73_453573 [Zea mays]
          Length = 238

 Score =  145 bits (365), Expect = 2e-32
 Identities = 65/123 (52%), Positives = 78/123 (63%)
 Frame = -3

Query: 917 GRDNDWTCPNCGNNNFSFRTVCNMRKCSTPRPGSQGSKADNXXXXXXXXXXXXXXXXXXX 738
           GRDNDW CPNC N NF FRTVCNMRKC+TPRP +QGSK+D                    
Sbjct: 143 GRDNDWECPNCHNINFGFRTVCNMRKCNTPRPANQGSKSDGL------------------ 184

Query: 737 XXXXXADNSKGSKPNMPEGSWKCEKCNNINFPFRMKCNRQNCGAQRPHDSNATHGLTSDE 558
                    +GSK  MPEGSWKCE+CNNIN+PFR KCNR  CGA++P  +N  +G  +D+
Sbjct: 185 ---------RGSKAKMPEGSWKCEQCNNINYPFRTKCNRPQCGAEKPSQTNNVNGSATDQ 235

Query: 557 DDQ 549
           D+Q
Sbjct: 236 DNQ 238


>gb|AFW61176.1| zn-finger, RanBP-type, containing protein, partial [Zea mays]
           gi|414869505|tpg|DAA48062.1| TPA: zn-finger, RanBP-type,
           containing protein [Zea mays]
          Length = 283

 Score =  145 bits (365), Expect = 2e-32
 Identities = 65/123 (52%), Positives = 78/123 (63%)
 Frame = -3

Query: 917 GRDNDWTCPNCGNNNFSFRTVCNMRKCSTPRPGSQGSKADNXXXXXXXXXXXXXXXXXXX 738
           GRDNDW CPNC N NF FRTVCNMRKC+TPRP +QGSK+D                    
Sbjct: 188 GRDNDWECPNCHNINFGFRTVCNMRKCNTPRPANQGSKSDGL------------------ 229

Query: 737 XXXXXADNSKGSKPNMPEGSWKCEKCNNINFPFRMKCNRQNCGAQRPHDSNATHGLTSDE 558
                    +GSK  MPEGSWKCE+CNNIN+PFR KCNR  CGA++P  +N  +G  +D+
Sbjct: 230 ---------RGSKAKMPEGSWKCEQCNNINYPFRTKCNRPQCGAEKPSQTNNVNGSATDQ 280

Query: 557 DDQ 549
           D+Q
Sbjct: 281 DNQ 283


>gb|ACG42397.1| Zn-finger, RanBP-type, containing protein [Zea mays]
          Length = 335

 Score =  145 bits (365), Expect = 2e-32
 Identities = 65/123 (52%), Positives = 78/123 (63%)
 Frame = -3

Query: 917 GRDNDWTCPNCGNNNFSFRTVCNMRKCSTPRPGSQGSKADNXXXXXXXXXXXXXXXXXXX 738
           GRDNDW CPNC N NF FRTVCNMRKC+TPRP +QGSK+D                    
Sbjct: 188 GRDNDWECPNCHNINFGFRTVCNMRKCNTPRPANQGSKSDGL------------------ 229

Query: 737 XXXXXADNSKGSKPNMPEGSWKCEKCNNINFPFRMKCNRQNCGAQRPHDSNATHGLTSDE 558
                    +GSK  MPEGSWKCE+CNNIN+PFR KCNR  CGA++P  +N  +G  +D+
Sbjct: 230 ---------RGSKAKMPEGSWKCEQCNNINYPFRTKCNRPQCGAEKPSQTNNVNGSATDQ 280

Query: 557 DDQ 549
           D+Q
Sbjct: 281 DNQ 283


>gb|ACG34661.1| Zn-finger, RanBP-type, containing protein [Zea mays]
          Length = 283

 Score =  145 bits (365), Expect = 2e-32
 Identities = 65/123 (52%), Positives = 78/123 (63%)
 Frame = -3

Query: 917 GRDNDWTCPNCGNNNFSFRTVCNMRKCSTPRPGSQGSKADNXXXXXXXXXXXXXXXXXXX 738
           GRDNDW CPNC N NF FRTVCNMRKC+TPRP +QGSK+D                    
Sbjct: 188 GRDNDWECPNCHNINFGFRTVCNMRKCNTPRPANQGSKSDGL------------------ 229

Query: 737 XXXXXADNSKGSKPNMPEGSWKCEKCNNINFPFRMKCNRQNCGAQRPHDSNATHGLTSDE 558
                    +GSK  MPEGSWKCE+CNNIN+PFR KCNR  CGA++P  +N  +G  +D+
Sbjct: 230 ---------RGSKAKMPEGSWKCEQCNNINYPFRTKCNRPQCGAEKPSQTNNVNGSATDQ 280

Query: 557 DDQ 549
           D+Q
Sbjct: 281 DNQ 283


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