BLASTX nr result

ID: Dioscorea21_contig00008412 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00008412
         (984 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269922.2| PREDICTED: auxin-responsive protein IAA11-li...   186   6e-45
gb|AEX00356.1| IAA13 [Solanum lycopersicum]                           186   1e-44
gb|AFP54302.1| ARF domain class transcription factor [Pyrus x br...   185   2e-44
gb|ADL36583.1| ARF domain class transcription factor [Malus x do...   185   2e-44
ref|XP_002303110.1| predicted protein [Populus trichocarpa] gi|2...   182   8e-44

>ref|XP_002269922.2| PREDICTED: auxin-responsive protein IAA11-like [Vitis vinifera]
          Length = 296

 Score =  186 bits (473), Expect = 6e-45
 Identities = 108/215 (50%), Positives = 132/215 (61%), Gaps = 19/215 (8%)
 Frame = -2

Query: 845 RILTAKDLPXXXXXXXXXXXXXXXXXSPNGVAGSKRVADVVGSAANPSSQMVVGWPPIRA 666
           RILTAKD P                       G+KR AD V ++ N SSQ VVGWPPIRA
Sbjct: 69  RILTAKDFPSTVSSSSSSSSSLSRANRTT--VGTKRRADSVAASNNGSSQ-VVGWPPIRA 125

Query: 665 FRMNNLVNQSKDTISDDDNALKKSNKKESTC--------------GKDHDKQGSSLFVKV 528
           +RMN+L NQSK  +++D N++ + +K  +T                K      +S FVKV
Sbjct: 126 YRMNSLANQSKSLVTEDLNSMVEKSKSTNTMVENTYNGSNNTNGYAKKKGPLNTSFFVKV 185

Query: 527 NMDGDPIGRKVDLNAHLSYDSLAHALELMFRKPTS-----DCVTASKLLGGLSEFALTYE 363
           NMDG PIGRKVDL+AH  Y++LA  LE MF+ PT+     +    SKLL G S+F LTYE
Sbjct: 186 NMDGIPIGRKVDLSAHSCYETLAKTLEEMFQGPTTTVNAIESTRPSKLLDGSSDFVLTYE 245

Query: 362 DKDGDWMLVGDVPWRMFLSAVKRLRIMRTSDANGL 258
           DK+GDWMLVGDVPW MFL + +RLRIMRTSDANGL
Sbjct: 246 DKEGDWMLVGDVPWGMFLGSARRLRIMRTSDANGL 280


>gb|AEX00356.1| IAA13 [Solanum lycopersicum]
          Length = 283

 Score =  186 bits (471), Expect = 1e-44
 Identities = 115/218 (52%), Positives = 133/218 (61%), Gaps = 22/218 (10%)
 Frame = -2

Query: 845 RILTAKDLPXXXXXXXXXXXXXXXXXSPNGVAGSKRVADV------VGSAANPSSQMVVG 684
           RILTAKD P                    GV+G+KR AD       VGS    +S  VVG
Sbjct: 59  RILTAKDFPNGFSAKRSINV---------GVSGTKRAADFAGSTTEVGSPPTGASSQVVG 109

Query: 683 WPPIRAFRMNNLVNQSKDTISDDD-----NALKKSNKKESTCGKDHD------KQGSSLF 537
           WPPIRA+RMN+LVNQSK   +DD+     N  K+ +KK+   G   D      ++G   F
Sbjct: 110 WPPIRAYRMNSLVNQSKVLNADDEKGVGGNDKKEHSKKKINHGNTKDDAASVKEKGHLGF 169

Query: 536 VKVNMDGDPIGRKVDLNAHLSYDSLAHALELMFRKPTSD-----CVTASKLLGGLSEFAL 372
           VKVNMDG PIGRKVDLNAH  Y+SLA  LE MF K T          + KLL G SEF L
Sbjct: 170 VKVNMDGLPIGRKVDLNAHTCYESLAETLEDMFFKSTKSGEKEQATKSFKLLDGSSEFVL 229

Query: 371 TYEDKDGDWMLVGDVPWRMFLSAVKRLRIMRTSDANGL 258
           TYEDK+GDWMLVGDVP+ MFL+ VKRLRIMRTS+ANGL
Sbjct: 230 TYEDKEGDWMLVGDVPFGMFLNTVKRLRIMRTSEANGL 267


>gb|AFP54302.1| ARF domain class transcription factor [Pyrus x bretschneideri]
          Length = 306

 Score =  185 bits (469), Expect = 2e-44
 Identities = 114/217 (52%), Positives = 133/217 (61%), Gaps = 21/217 (9%)
 Frame = -2

Query: 845 RILTAKDLPXXXXXXXXXXXXXXXXXSPNG-----VAGSKRVADVV---GSAANPSSQMV 690
           RILTAKD P                  PN      V+G+KR AD V   G +    SQ V
Sbjct: 75  RILTAKDFPSMMVSHGGSSAASRFSHRPNASAAVAVSGTKRAADSVPQEGGSPTAVSQ-V 133

Query: 689 VGWPPIRAFRMNNLVNQSKDTISDDDNAL----KKSNKKESTCGKDHD--KQGSSLFVKV 528
           VGWPPI A RMN+LVNQ+K   ++DD A+    K ++KK+   G      ++G   FVKV
Sbjct: 134 VGWPPISAARMNSLVNQAKTARAEDDTAVGEKSKDTSKKKINVGSKTTVKEKGHLGFVKV 193

Query: 527 NMDGDPIGRKVDLNAHLSYDSLAHALELMFRKPTS-------DCVTASKLLGGLSEFALT 369
           NMDG PIGRKVDLNAH  Y++LA  LE MF  PT+            SKLL G SEF LT
Sbjct: 194 NMDGIPIGRKVDLNAHSCYETLAQTLEEMFISPTTAIGGDTEQAKKPSKLLDGSSEFVLT 253

Query: 368 YEDKDGDWMLVGDVPWRMFLSAVKRLRIMRTSDANGL 258
           YEDK+GDWMLVGDVPW MFL +VKRLRIMRTS+ANGL
Sbjct: 254 YEDKEGDWMLVGDVPWGMFLGSVKRLRIMRTSEANGL 290


>gb|ADL36583.1| ARF domain class transcription factor [Malus x domestica]
          Length = 306

 Score =  185 bits (469), Expect = 2e-44
 Identities = 114/217 (52%), Positives = 133/217 (61%), Gaps = 21/217 (9%)
 Frame = -2

Query: 845 RILTAKDLPXXXXXXXXXXXXXXXXXSPNG-----VAGSKRVADVV---GSAANPSSQMV 690
           RILTAKDLP                  PN      V+G+KR AD     G +    SQ V
Sbjct: 75  RILTAKDLPSMVVSRGASSAASRFSHRPNASAAVAVSGTKRAADSAPQEGGSPTAVSQ-V 133

Query: 689 VGWPPIRAFRMNNLVNQSKDTISDDDNAL----KKSNKKESTCGKDHD--KQGSSLFVKV 528
           VGWPPI A RMN+LVNQ+K   ++DD A+    K ++KK+   G      ++G   FVKV
Sbjct: 134 VGWPPISAARMNSLVNQAKTARAEDDTAVGEKSKDTSKKKINVGSKTTVKEKGHLGFVKV 193

Query: 527 NMDGDPIGRKVDLNAHLSYDSLAHALELMFRKPTS-------DCVTASKLLGGLSEFALT 369
           NMDG PIGRKVDLNAH  Y++LA  LE MF  PT+            SKLL G SEF LT
Sbjct: 194 NMDGIPIGRKVDLNAHSCYETLAQTLEEMFISPTTTIGGDTEQAKKPSKLLDGSSEFVLT 253

Query: 368 YEDKDGDWMLVGDVPWRMFLSAVKRLRIMRTSDANGL 258
           YEDK+GDWMLVGDVPW MFL +VKRLRIMRTS+ANGL
Sbjct: 254 YEDKEGDWMLVGDVPWGMFLGSVKRLRIMRTSEANGL 290


>ref|XP_002303110.1| predicted protein [Populus trichocarpa] gi|222844836|gb|EEE82383.1|
           predicted protein [Populus trichocarpa]
           gi|429326558|gb|AFZ78619.1| hypothetical protein
           [Populus tomentosa]
          Length = 290

 Score =  182 bits (463), Expect = 8e-44
 Identities = 110/222 (49%), Positives = 134/222 (60%), Gaps = 26/222 (11%)
 Frame = -2

Query: 845 RILTAKDLPXXXXXXXXXXXXXXXXXSP----NGVAGSKRVADVVGSAANPSSQMVVGWP 678
           RILTAKDLP                 S     N  AG+KR AD V ++   +S  VVGWP
Sbjct: 67  RILTAKDLPSKVSSSSCCSSTTSSSSSTLSRANATAGTKRAADSVSASNGAASSQVVGWP 126

Query: 677 PIRAFRMNNLVNQSKDTISDDDNAL-KKSNKKESTCGKDH-----DKQGSSLFVKVNMDG 516
           PIR+ RM+ +VNQ+K   +++ N++ K+ N  E   G  +      K  +SLFVKVNMDG
Sbjct: 127 PIRSHRMHIMVNQAKSQATEEFNSMNKRKNAVEEKVGNKNINIGNTKTRTSLFVKVNMDG 186

Query: 515 DPIGRKVDLNAHLSYDSLAHALELMFRKPTS----------------DCVTASKLLGGLS 384
             IGRKVDLNAH  Y++LA ALE MF + T+                D    S+LLGG S
Sbjct: 187 TLIGRKVDLNAHGCYETLAQALENMFLRTTTTLNMARLSTPEHKIMIDAKRHSQLLGGSS 246

Query: 383 EFALTYEDKDGDWMLVGDVPWRMFLSAVKRLRIMRTSDANGL 258
           EF LTYEDKDGDWMLVGDVPW MF+S+VKRLRIMR S+A GL
Sbjct: 247 EFVLTYEDKDGDWMLVGDVPWGMFISSVKRLRIMRMSEATGL 288


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