BLASTX nr result

ID: Dioscorea21_contig00008397 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00008397
         (1024 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269833.1| PREDICTED: F-box protein PP2-A13 [Vitis vini...   362   6e-98
ref|XP_002320090.1| f-box family protein [Populus trichocarpa] g...   359   7e-97
dbj|BAD46491.1| unknown protein [Oryza sativa Japonica Group] gi...   353   5e-95
gb|EEC84906.1| hypothetical protein OsI_32098 [Oryza sativa Indi...   351   2e-94
gb|EAY79248.1| hypothetical protein OsI_34365 [Oryza sativa Indi...   350   2e-94

>ref|XP_002269833.1| PREDICTED: F-box protein PP2-A13 [Vitis vinifera]
            gi|296089069|emb|CBI38772.3| unnamed protein product
            [Vitis vinifera]
          Length = 289

 Score =  362 bits (930), Expect = 6e-98
 Identities = 168/249 (67%), Positives = 198/249 (79%), Gaps = 2/249 (0%)
 Frame = +3

Query: 282  DIPESCVAEVMLRLDPPEICALARLGRVFRGAASADFVWEAKLPDNYRYMMKVASEERK- 458
            DIPESC+A V++ LDPPEIC LARL R FRGA++ADF+WEAKLP NYR ++    +E K 
Sbjct: 26   DIPESCLALVLMNLDPPEICKLARLNRAFRGASAADFIWEAKLPPNYRSLI----QELKI 81

Query: 459  -DGSWDKMSKKEIFAKLCRPNPFDGGAKEFWLEKWKSQVCMSISSKALAITGIDDRRYWN 635
             D     + KK I+A+LCRPNPFDGG KE WL+K    VC SISSKAL ITGIDDRRYWN
Sbjct: 82   FDEFSMNLRKKGIYARLCRPNPFDGGTKEVWLDKRTGGVCFSISSKALTITGIDDRRYWN 141

Query: 636  HIPSDESRFHTVAYLQQIWWFEVDGDIEFQFPPGTYSLYFRLYLGRPTKRLGLRSCSPEH 815
            HIP++ESRF TVAYLQQ WWFEVDG+ EF+FPPGTYSL+FRL+LGR +KRLG R C+PEH
Sbjct: 142  HIPTEESRFQTVAYLQQTWWFEVDGEFEFRFPPGTYSLFFRLHLGRASKRLGRRVCNPEH 201

Query: 816  IHGWDIKPVRFHVSTSDGQQTVSKQFLRGAGTWIHYHAGDFTVQDSSSITKVKFSMTQID 995
            IHGWDIKPV+F ++TS+GQ  VSK +L   G WIH+H GDF V+   +  KVKFS TQID
Sbjct: 202  IHGWDIKPVKFQLTTSEGQHAVSKCYLENPGNWIHHHVGDFVVEQGDTAMKVKFSATQID 261

Query: 996  CTHTKGGLC 1022
            CTHTKGG+C
Sbjct: 262  CTHTKGGVC 270


>ref|XP_002320090.1| f-box family protein [Populus trichocarpa]
            gi|222860863|gb|EEE98405.1| f-box family protein [Populus
            trichocarpa]
          Length = 294

 Score =  359 bits (921), Expect = 7e-97
 Identities = 163/248 (65%), Positives = 197/248 (79%), Gaps = 1/248 (0%)
 Frame = +3

Query: 282  DIPESCVAEVMLRLDPPEICALARLGRVFRGAASADFVWEAKLPDNYRYMM-KVASEERK 458
            DIPESC+A V++ LDPP+IC LARL R F GA+SADF+WE+KLP NY+++  KV  E+  
Sbjct: 26   DIPESCLALVLMHLDPPDICKLARLNRAFHGASSADFIWESKLPSNYKFICEKVLDEKTV 85

Query: 459  DGSWDKMSKKEIFAKLCRPNPFDGGAKEFWLEKWKSQVCMSISSKALAITGIDDRRYWNH 638
             G    + KK+++A++CRPNPFDGG KE WL+K     C SISSK LAITGIDDRRYWNH
Sbjct: 86   VG----LEKKDVYARMCRPNPFDGGTKEVWLDKKTGGACFSISSKGLAITGIDDRRYWNH 141

Query: 639  IPSDESRFHTVAYLQQIWWFEVDGDIEFQFPPGTYSLYFRLYLGRPTKRLGLRSCSPEHI 818
            I ++ESRFHTVAYLQQIWWFE+DG+ EF+FP G YSL+FRL LGR +KR+G R C+ EHI
Sbjct: 142  ISTEESRFHTVAYLQQIWWFEIDGEFEFEFPKGMYSLFFRLQLGRSSKRMGRRVCNSEHI 201

Query: 819  HGWDIKPVRFHVSTSDGQQTVSKQFLRGAGTWIHYHAGDFTVQDSSSITKVKFSMTQIDC 998
            HGWDIKPVRF ++TSDGQ+  SK FL   G W++YHAGDF V   S + K+KFSMTQIDC
Sbjct: 202  HGWDIKPVRFQLTTSDGQRAASKCFLDTPGNWVYYHAGDFVVDRPSELMKIKFSMTQIDC 261

Query: 999  THTKGGLC 1022
            THTKGGLC
Sbjct: 262  THTKGGLC 269


>dbj|BAD46491.1| unknown protein [Oryza sativa Japonica Group]
            gi|52077306|dbj|BAD46347.1| unknown protein [Oryza sativa
            Japonica Group]
          Length = 287

 Score =  353 bits (905), Expect = 5e-95
 Identities = 164/247 (66%), Positives = 196/247 (79%)
 Frame = +3

Query: 282  DIPESCVAEVMLRLDPPEICALARLGRVFRGAASADFVWEAKLPDNYRYMMKVASEERKD 461
            D+PESCVAEV+ RLDPPEIC +ARL R FRGAAS D VWEAKLP NY  ++ VA++    
Sbjct: 21   DLPESCVAEVLRRLDPPEICRMARLSRTFRGAASGDGVWEAKLPRNYARLLAVAADGEA- 79

Query: 462  GSWDKMSKKEIFAKLCRPNPFDGGAKEFWLEKWKSQVCMSISSKALAITGIDDRRYWNHI 641
             + + + KKE++A+LCR N  DGG KEFWL+K    VCM+ISS+AL+ITGIDDRRYWN I
Sbjct: 80   AALEAIPKKEVYARLCRRNRLDGGTKEFWLDKGGGGVCMTISSRALSITGIDDRRYWNFI 139

Query: 642  PSDESRFHTVAYLQQIWWFEVDGDIEFQFPPGTYSLYFRLYLGRPTKRLGLRSCSPEHIH 821
            P+DESRFH VAYL QIWWFEV G++EF FP GTYSL+FRL+LGRP KRLG R  S EHIH
Sbjct: 140  PNDESRFHAVAYLSQIWWFEVRGEVEFCFPEGTYSLFFRLHLGRPLKRLGRRVYSSEHIH 199

Query: 822  GWDIKPVRFHVSTSDGQQTVSKQFLRGAGTWIHYHAGDFTVQDSSSITKVKFSMTQIDCT 1001
            GWDIKPVRF +STSDGQQ  SK +L   G WI++H GDF V+ S+ + K++F+M QIDCT
Sbjct: 200  GWDIKPVRFQLSTSDGQQAQSKCYLTDPGVWINHHVGDFVVKSSNELVKIQFAMVQIDCT 259

Query: 1002 HTKGGLC 1022
            HTKGGLC
Sbjct: 260  HTKGGLC 266


>gb|EEC84906.1| hypothetical protein OsI_32098 [Oryza sativa Indica Group]
          Length = 287

 Score =  351 bits (900), Expect = 2e-94
 Identities = 164/247 (66%), Positives = 195/247 (78%)
 Frame = +3

Query: 282  DIPESCVAEVMLRLDPPEICALARLGRVFRGAASADFVWEAKLPDNYRYMMKVASEERKD 461
            D+PESCVAEV+ RLDPPEIC +ARL R FRGAAS D VWEAKLP NY  ++ VA++    
Sbjct: 21   DLPESCVAEVLRRLDPPEICRMARLSRTFRGAASGDGVWEAKLPRNYARLLAVAADGEA- 79

Query: 462  GSWDKMSKKEIFAKLCRPNPFDGGAKEFWLEKWKSQVCMSISSKALAITGIDDRRYWNHI 641
             + + + KKE++A+LCR N  DGG KEFWL+K    VCM+ISS+AL+ITGIDDRRYWN I
Sbjct: 80   AALEAIPKKEVYARLCRRNRLDGGTKEFWLDKGGGGVCMTISSRALSITGIDDRRYWNFI 139

Query: 642  PSDESRFHTVAYLQQIWWFEVDGDIEFQFPPGTYSLYFRLYLGRPTKRLGLRSCSPEHIH 821
            P+DESRFH VAYL QIWWFEV G++EF FP GTYSL+FRL+LGRP KRLG R  S EHIH
Sbjct: 140  PNDESRFHAVAYLSQIWWFEVRGEVEFCFPEGTYSLFFRLHLGRPLKRLGRRVYSSEHIH 199

Query: 822  GWDIKPVRFHVSTSDGQQTVSKQFLRGAGTWIHYHAGDFTVQDSSSITKVKFSMTQIDCT 1001
            GWDIKPVRF +STSDGQQ  SK +L   G WI++H GDF V+ S+   K++F+M QIDCT
Sbjct: 200  GWDIKPVRFQLSTSDGQQAQSKCYLTDPGVWINHHVGDFVVKSSNEPVKIQFAMVQIDCT 259

Query: 1002 HTKGGLC 1022
            HTKGGLC
Sbjct: 260  HTKGGLC 266


>gb|EAY79248.1| hypothetical protein OsI_34365 [Oryza sativa Indica Group]
          Length = 310

 Score =  350 bits (899), Expect = 2e-94
 Identities = 164/255 (64%), Positives = 192/255 (75%), Gaps = 8/255 (3%)
 Frame = +3

Query: 282  DIPESCVAEVMLRLDPPEICALARLGRVFRGAASADFVWEAKLPDNYRYMMKVAS----- 446
            D+PE C AEV+LRLD PEIC LARL   FRGAA ADFVWEAKLP+NYRY+M         
Sbjct: 32   DLPELCAAEVLLRLDAPEICRLARLNHAFRGAAGADFVWEAKLPENYRYLMSFVEGGGGG 91

Query: 447  ---EERKDGSWDKMSKKEIFAKLCRPNPFDGGAKEFWLEKWKSQVCMSISSKALAITGID 617
                + +   W    KKEI+A+L RP PFDGG+KEFWLEK K +VCM++SSK+L ITGID
Sbjct: 92   DDGRQLRRRRWRPAGKKEIYARLARPVPFDGGSKEFWLEKSKGRVCMALSSKSLVITGID 151

Query: 618  DRRYWNHIPSDESRFHTVAYLQQIWWFEVDGDIEFQFPPGTYSLYFRLYLGRPTKRLGLR 797
            DRRYW HIP+ ESRFH+VAYLQQIWWFEV G+I+F FP GTYSLYFR++LG+  KR G R
Sbjct: 152  DRRYWQHIPTAESRFHSVAYLQQIWWFEVVGEIDFSFPVGTYSLYFRIHLGKFYKRFGRR 211

Query: 798  SCSPEHIHGWDIKPVRFHVSTSDGQQTVSKQFLRGAGTWIHYHAGDFTVQDSSSITKVKF 977
             CS EH+HGWD KPVRF +STSDGQ ++S+  L   G+W+ YHAGDF V       K+KF
Sbjct: 212  VCSTEHVHGWDKKPVRFQLSTSDGQHSLSQCSLGEPGSWVLYHAGDFVVSKPDQTIKLKF 271

Query: 978  SMTQIDCTHTKGGLC 1022
            SM QIDCTHTKGGLC
Sbjct: 272  SMAQIDCTHTKGGLC 286


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