BLASTX nr result

ID: Dioscorea21_contig00008393 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00008393
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004164993.1| PREDICTED: elongation factor G, mitochondria...    81   8e-14
ref|XP_004140514.1| PREDICTED: elongation factor G, mitochondria...    81   8e-14
ref|NP_001050501.1| Os03g0565500 [Oryza sativa Japonica Group] g...    81   8e-14
gb|EEC75588.1| hypothetical protein OsI_12281 [Oryza sativa Indi...    81   8e-14
gb|AAK53868.1|AC016781_22 Mitochondrial elongation factor G [Ory...    81   8e-14

>ref|XP_004164993.1| PREDICTED: elongation factor G, mitochondrial-like [Cucumis
           sativus]
          Length = 565

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 47/86 (54%), Positives = 55/86 (63%), Gaps = 6/86 (6%)
 Frame = +3

Query: 6   RSSATRLLSSIRSKTNTVVLLIDGGAMPPSAG------GRRAMSTATRAKEDKEAWWKES 167
           R+S  RLL S  S T     L    +  PS+         R  S+A R KEDKE WWKES
Sbjct: 6   RTSTPRLLYSFYSST-----LTHSSSPSPSSALLLGNFHLRHSSSAARVKEDKEPWWKES 60

Query: 168 LERMRNIGISAHIDSGKTTLTERVLF 245
           +E++RNIGISAHIDSGKTTLTERVL+
Sbjct: 61  MEKVRNIGISAHIDSGKTTLTERVLY 86


>ref|XP_004140514.1| PREDICTED: elongation factor G, mitochondrial-like [Cucumis
           sativus]
          Length = 753

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 47/86 (54%), Positives = 55/86 (63%), Gaps = 6/86 (6%)
 Frame = +3

Query: 6   RSSATRLLSSIRSKTNTVVLLIDGGAMPPSAG------GRRAMSTATRAKEDKEAWWKES 167
           R+S  RLL S  S T     L    +  PS+         R  S+A R KEDKE WWKES
Sbjct: 6   RTSTPRLLYSFYSST-----LTHSSSPSPSSALLLGNFHLRHSSSAARVKEDKEPWWKES 60

Query: 168 LERMRNIGISAHIDSGKTTLTERVLF 245
           +E++RNIGISAHIDSGKTTLTERVL+
Sbjct: 61  MEKVRNIGISAHIDSGKTTLTERVLY 86


>ref|NP_001050501.1| Os03g0565500 [Oryza sativa Japonica Group]
           gi|109940076|sp|Q9FE64.2|EFGM_ORYSJ RecName:
           Full=Elongation factor G, mitochondrial; Short=EF-Gmt;
           AltName: Full=Elongation factor G 1, mitochondrial;
           Short=mEF-G 1; AltName: Full=Elongation factor G1;
           Flags: Precursor gi|13957623|gb|AAK50578.1|AC084404_3
           mitochondrial elongation factor G [Oryza sativa Japonica
           Group] gi|108709356|gb|ABF97151.1| Elongation factor G,
           mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group] gi|113548972|dbj|BAF12415.1|
           Os03g0565500 [Oryza sativa Japonica Group]
          Length = 757

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 50/87 (57%), Positives = 63/87 (72%), Gaps = 6/87 (6%)
 Frame = +3

Query: 3   ARSSATRLLSSIRSKTNTVVLLIDG---GAMPPSAGGRRAMSTAT--RAKEDKE-AWWKE 164
           AR SA+RLLSS R  +  +  L D     A   +A  RR MS+A+  RA+++KE A W+E
Sbjct: 4   ARRSASRLLSSFRPFSLLLQPLDDAPSLSAAAAAASARRGMSSASALRARDEKEVARWRE 63

Query: 165 SLERMRNIGISAHIDSGKTTLTERVLF 245
           S++RMRNIGISAHIDSGKTTLTERVL+
Sbjct: 64  SMDRMRNIGISAHIDSGKTTLTERVLY 90


>gb|EEC75588.1| hypothetical protein OsI_12281 [Oryza sativa Indica Group]
          Length = 284

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 50/87 (57%), Positives = 63/87 (72%), Gaps = 6/87 (6%)
 Frame = +3

Query: 3   ARSSATRLLSSIRSKTNTVVLLIDG---GAMPPSAGGRRAMSTAT--RAKEDKE-AWWKE 164
           AR SA+RLLSS R  +  +  L D     A   +A  RR MS+A+  RA+++KE A W+E
Sbjct: 4   ARRSASRLLSSFRPFSLLLQPLDDAPSLSAAAAAASARRGMSSASALRARDEKEVARWRE 63

Query: 165 SLERMRNIGISAHIDSGKTTLTERVLF 245
           S++RMRNIGISAHIDSGKTTLTERVL+
Sbjct: 64  SMDRMRNIGISAHIDSGKTTLTERVLY 90


>gb|AAK53868.1|AC016781_22 Mitochondrial elongation factor G [Oryza sativa Japonica Group]
           gi|125586849|gb|EAZ27513.1| hypothetical protein
           OsJ_11462 [Oryza sativa Japonica Group]
          Length = 770

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 50/87 (57%), Positives = 63/87 (72%), Gaps = 6/87 (6%)
 Frame = +3

Query: 3   ARSSATRLLSSIRSKTNTVVLLIDG---GAMPPSAGGRRAMSTAT--RAKEDKE-AWWKE 164
           AR SA+RLLSS R  +  +  L D     A   +A  RR MS+A+  RA+++KE A W+E
Sbjct: 4   ARRSASRLLSSFRPFSLLLQPLDDAPSLSAAAAAASARRGMSSASALRARDEKEVARWRE 63

Query: 165 SLERMRNIGISAHIDSGKTTLTERVLF 245
           S++RMRNIGISAHIDSGKTTLTERVL+
Sbjct: 64  SMDRMRNIGISAHIDSGKTTLTERVLY 90


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