BLASTX nr result

ID: Dioscorea21_contig00008388 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00008388
         (1099 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298478.1| predicted protein [Populus trichocarpa] gi|2...   307   3e-81
ref|XP_003610502.1| Integrator complex subunit-like protein [Med...   293   5e-77
ref|XP_004154690.1| PREDICTED: integrator complex subunit 3 homo...   276   5e-72
ref|XP_004139125.1| PREDICTED: uncharacterized protein LOC101216...   276   5e-72
ref|XP_002275456.1| PREDICTED: integrator complex subunit 3 homo...   269   8e-70

>ref|XP_002298478.1| predicted protein [Populus trichocarpa] gi|222845736|gb|EEE83283.1|
           predicted protein [Populus trichocarpa]
          Length = 995

 Score =  307 bits (787), Expect = 3e-81
 Identities = 143/257 (55%), Positives = 198/257 (77%), Gaps = 1/257 (0%)
 Frame = -1

Query: 769 QLLQCKPYECENPFGISLREAFVLLQSQLKPPFSLKIPNPSEYSQLNLAIVYGILTQPQL 590
           +LL+   YE +N   +SL++AF  L+ +L+PPF L IP+P EYS+LNLAI+YG+LT+P L
Sbjct: 4   KLLKLTAYEAKNELELSLKQAFEELEPKLRPPFPLTIPSPQEYSRLNLAILYGVLTEPLL 63

Query: 589 AKTHLTHLHAIVTDGYCFFTSTLIKLVNDSFPRLLGTPRTQLLWLTSKLVDVSAVKIEAL 410
           AKTH+ HLHAIVTDGY  F S ++K+VND + +L+ + + QL+W+  ++VDV  V  +  
Sbjct: 64  AKTHIKHLHAIVTDGYALFVSLIVKIVNDLYGKLVDSVKDQLVWVVKEMVDVLGVGFDGF 123

Query: 409 LVLLLRWIIGGDFSEPNLWLCAELLRMFLDKWEWLSSE-PLVLTSALFVYLRLLADHYRL 233
           LV LLR I+GGDFS+ NLWLC EL+ +F  KW+ L  + P VLTSAL+VYLR+LADH ++
Sbjct: 124 LVCLLRQIVGGDFSDGNLWLCFELVSLFSSKWDCLVEDAPFVLTSALYVYLRVLADHCKV 183

Query: 232 AGGVKLEALKRMEIDFCVRVLRECFGLCLKTGRDLVRLLQDVVYIPEFKELWKDLLFNPG 53
           +   K+E+LKR+EI+FCV++LRE F LC+K GRDL+RLL+D+V++PEF+ +W DL+ NP 
Sbjct: 184 STDAKMESLKRLEIEFCVKMLREQFNLCMKIGRDLIRLLRDLVHVPEFRAIWNDLVSNPS 243

Query: 52  VFQVSGFSDISQLYCVR 2
            F+  GFSDISQLYC R
Sbjct: 244 EFRTEGFSDISQLYCSR 260


>ref|XP_003610502.1| Integrator complex subunit-like protein [Medicago truncatula]
           gi|355511557|gb|AES92699.1| Integrator complex
           subunit-like protein [Medicago truncatula]
          Length = 560

 Score =  293 bits (750), Expect = 5e-77
 Identities = 139/259 (53%), Positives = 189/259 (72%), Gaps = 1/259 (0%)
 Frame = -1

Query: 775 LPQLLQCKPYECENPFGISLREAFVLLQSQLKPPFSLKIPNPSEYSQLNLAIVYGILTQP 596
           +P L    P+E EN   ISL+++   LQ  LKPPFSL IPNP EY QLN AI++ ILTQP
Sbjct: 2   VPNLTLTAPHEAENQIEISLKQSLQSLQPSLKPPFSLTIPNPDEYIQLNHAILHAILTQP 61

Query: 595 QLAKTHLTHLHAIVTDGYCFFTSTLIKLVNDSFPRLLGTPRTQLLWLTSKLVDVSAVKIE 416
             +KTH+ HLHAI+TDGY  F + L  +V+  +P+LLG+ + QL+W+T +++ VS +  +
Sbjct: 62  HFSKTHVKHLHAIITDGYATFLNLLFNIVHHLYPKLLGSVKHQLIWVTDEMIQVSGIGYD 121

Query: 415 ALLVLLLRWIIGGDFSEPNLWLCAELLRMFLDKWEWLSSE-PLVLTSALFVYLRLLADHY 239
           ALL+ LLR I+GGDFS+ NLWLC +L+ + LDKW+ L  E P VL S L+V+LR+LADH 
Sbjct: 122 ALLISLLRQIVGGDFSDDNLWLCEKLVTLLLDKWDCLLEEMPHVLCSGLYVFLRVLADHC 181

Query: 238 RLAGGVKLEALKRMEIDFCVRVLRECFGLCLKTGRDLVRLLQDVVYIPEFKELWKDLLFN 59
           R+  G K E+LKR+E+ FCV+++RE F LC+K GRD +RLLQD+V++PEFK +WKDL+ N
Sbjct: 182 RV-NGEKFESLKRLEVHFCVKIVREEFHLCMKIGRDFIRLLQDLVHVPEFKSIWKDLMLN 240

Query: 58  PGVFQVSGFSDISQLYCVR 2
           P  F   GFS +SQ+Y  R
Sbjct: 241 PSSFNTLGFSGVSQIYLTR 259


>ref|XP_004154690.1| PREDICTED: integrator complex subunit 3 homolog [Cucumis sativus]
          Length = 588

 Score =  276 bits (707), Expect = 5e-72
 Identities = 136/257 (52%), Positives = 183/257 (71%), Gaps = 1/257 (0%)
 Frame = -1

Query: 769 QLLQCKPYECENPFGISLREAFVLLQSQLKPPFSLKIPNPSEYSQLNLAIVYGILTQPQL 590
           +L+    YE EN F +SLR+AF LL+ +L+PPF LKIP+P EY +LN AI+YGIL +P L
Sbjct: 4   KLIHVAAYEAENHFEVSLRQAFELLEPKLRPPFCLKIPDPQEYKELNWAILYGILCEPHL 63

Query: 589 AKTHLTHLHAIVTDGYCFFTSTLIKLVNDSFPRLLGTPRTQLLWLTSKLVDVSAVKIEAL 410
            KTH+ HLHAIVTDGY      L K+VN+ + +L+   + Q+  +T +++ V AV ++A+
Sbjct: 64  GKTHIKHLHAIVTDGYGLICYLLRKVVNELYLKLIDGAKCQIFMVTKEMIKVCAVGVDAV 123

Query: 409 LVLLLRWIIGGDFSEPNLWLCAELLRMFLDKWEWLSSE-PLVLTSALFVYLRLLADHYRL 233
           L+ LLR I+GGDF E NLWLC EL  + L+ W +L  E P V+ SAL+ +LRLLADH R 
Sbjct: 124 LISLLRQIVGGDFGEGNLWLCFELASLLLNSWSYLLEELPEVMPSALYTFLRLLADHCRF 183

Query: 232 AGGVKLEALKRMEIDFCVRVLRECFGLCLKTGRDLVRLLQDVVYIPEFKELWKDLLFNPG 53
           +   KL  LK++EI FC++V+RE F  CLK GRD +RLLQD+VY+PEF+++WKDLL NP 
Sbjct: 184 S-DEKLGPLKQLEIAFCIKVIREQFHFCLKIGRDFIRLLQDLVYVPEFRDVWKDLLINPS 242

Query: 52  VFQVSGFSDISQLYCVR 2
            F+  GFSDIS  Y  R
Sbjct: 243 NFRSPGFSDISNFYHTR 259


>ref|XP_004139125.1| PREDICTED: uncharacterized protein LOC101216642 [Cucumis sativus]
          Length = 1058

 Score =  276 bits (707), Expect = 5e-72
 Identities = 136/257 (52%), Positives = 183/257 (71%), Gaps = 1/257 (0%)
 Frame = -1

Query: 769 QLLQCKPYECENPFGISLREAFVLLQSQLKPPFSLKIPNPSEYSQLNLAIVYGILTQPQL 590
           +L+    YE EN F +SLR+AF LL+ +L+PPF LKIP+P EY +LN AI+YGIL +P L
Sbjct: 4   KLIHVAAYEAENHFEVSLRQAFELLEPKLRPPFCLKIPDPQEYKELNWAILYGILCEPHL 63

Query: 589 AKTHLTHLHAIVTDGYCFFTSTLIKLVNDSFPRLLGTPRTQLLWLTSKLVDVSAVKIEAL 410
            KTH+ HLHAIVTDGY      L K+VN+ + +L+   + Q+  +T +++ V AV ++A+
Sbjct: 64  GKTHIKHLHAIVTDGYGLICYLLRKVVNELYLKLIDGAKCQIFMVTKEMIKVCAVGVDAV 123

Query: 409 LVLLLRWIIGGDFSEPNLWLCAELLRMFLDKWEWLSSE-PLVLTSALFVYLRLLADHYRL 233
           L+ LLR I+GGDF E NLWLC EL  + L+ W +L  E P V+ SAL+ +LRLLADH R 
Sbjct: 124 LISLLRQIVGGDFGEGNLWLCFELTSLLLNSWSYLLEELPEVMPSALYTFLRLLADHCRF 183

Query: 232 AGGVKLEALKRMEIDFCVRVLRECFGLCLKTGRDLVRLLQDVVYIPEFKELWKDLLFNPG 53
           +   KL  LK++EI FC++V+RE F  CLK GRD +RLLQD+VY+PEF+++WKDLL NP 
Sbjct: 184 S-DEKLGPLKQLEIAFCIKVIREQFHFCLKIGRDFIRLLQDLVYVPEFRDVWKDLLINPS 242

Query: 52  VFQVSGFSDISQLYCVR 2
            F+  GFSDIS  Y  R
Sbjct: 243 NFRSPGFSDISNFYHTR 259


>ref|XP_002275456.1| PREDICTED: integrator complex subunit 3 homolog [Vitis vinifera]
          Length = 928

 Score =  269 bits (688), Expect = 8e-70
 Identities = 136/254 (53%), Positives = 178/254 (70%), Gaps = 1/254 (0%)
 Frame = -1

Query: 769 QLLQCKPYECENPFGISLREAFVLLQSQLKPPFSLKIPNPSEYSQLNLAIVYGILTQPQL 590
           +LL+    E ++   +SLR+AF LL+ QL+PPF L IP P EY QLN AI+YG+L +P  
Sbjct: 4   KLLKIGSLEAQSQIELSLRQAFELLEPQLRPPFPLTIPTPEEYLQLNWAILYGVLCEPHF 63

Query: 589 AKTHLTHLHAIVTDGYCFFTSTLIKLVNDSFPRLLGTPRTQLLWLTSKLVDVSAVKIEAL 410
           AK  + +LHAIVTDGYC F S L  +VN+ + +L+ + R QL+WL S+++ VSA  I+ +
Sbjct: 64  AKIQIKYLHAIVTDGYCLFVSLLTTIVNELYFKLVESARIQLIWLVSEMIYVSAEGIDGV 123

Query: 409 LVLLLRWIIGGDFSEPNLWLCAELLRMFLDKWEWLSSE-PLVLTSALFVYLRLLADHYRL 233
           LV LLR I               L+ +FL KW WL  E PLVL S L+ YLR+LADH R 
Sbjct: 124 LVSLLRQI---------------LVSLFLSKWNWLVEEGPLVLRSGLYTYLRVLADHCRF 168

Query: 232 AGGVKLEALKRMEIDFCVRVLRECFGLCLKTGRDLVRLLQDVVYIPEFKELWKDLLFNPG 53
            G  KLEALKR+EI+FC+RVLRE F LCLK GRDL+RLLQD+V++PEF+ +WKDL+ NPG
Sbjct: 169 PGDSKLEALKRIEIEFCIRVLREQFHLCLKIGRDLIRLLQDLVHVPEFRAVWKDLVLNPG 228

Query: 52  VFQVSGFSDISQLY 11
            F++ GF D+SQLY
Sbjct: 229 EFKIQGFEDVSQLY 242


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