BLASTX nr result

ID: Dioscorea21_contig00008387 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00008387
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002886666.1| hypothetical protein ARALYDRAFT_475343 [Arab...   126   2e-27
gb|AAF79766.1|AC009317_25 T30E16.32 [Arabidopsis thaliana]            120   2e-25
ref|NP_176180.1| pentatricopeptide repeat-containing protein [Ar...   120   2e-25
dbj|BAF00484.1| hypothetical protein [Arabidopsis thaliana]           120   2e-25
gb|AAD39314.1|AC007258_3 Hypothetical protein [Arabidopsis thali...   120   2e-25

>ref|XP_002886666.1| hypothetical protein ARALYDRAFT_475343 [Arabidopsis lyrata subsp.
           lyrata] gi|297332507|gb|EFH62925.1| hypothetical protein
           ARALYDRAFT_475343 [Arabidopsis lyrata subsp. lyrata]
          Length = 608

 Score =  126 bits (316), Expect = 2e-27
 Identities = 58/95 (61%), Positives = 69/95 (72%)
 Frame = -2

Query: 287 GSQLHSHIVKLGFSSDIYILNSLVHFYSSCARLSLARQLFDRMPLKNRVSWNIMIDGCVM 108
           G Q+H  IVK GFS D+Y+ N L+HFY SC  L LAR++FD MP ++ VSWN MID  V 
Sbjct: 151 GKQVHCQIVKHGFSGDVYVNNGLIHFYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVR 210

Query: 107 CGEYETALELFRDMQSQFSPDAYTMQSALCACAAL 3
            GEY++AL+LFRDMQ  F PD YTMQS L ACA L
Sbjct: 211 VGEYDSALQLFRDMQKSFEPDGYTMQSVLSACAGL 245


>gb|AAF79766.1|AC009317_25 T30E16.32 [Arabidopsis thaliana]
          Length = 695

 Score =  120 bits (300), Expect = 2e-25
 Identities = 55/95 (57%), Positives = 67/95 (70%)
 Frame = -2

Query: 287 GSQLHSHIVKLGFSSDIYILNSLVHFYSSCARLSLARQLFDRMPLKNRVSWNIMIDGCVM 108
           G Q+H  IVK GF  D+Y+ N L+H Y SC  L LAR++FD MP ++ VSWN MID  V 
Sbjct: 227 GKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVR 286

Query: 107 CGEYETALELFRDMQSQFSPDAYTMQSALCACAAL 3
            GEY++AL+LFR+MQ  F PD YTMQS L ACA L
Sbjct: 287 FGEYDSALQLFREMQRSFEPDGYTMQSVLSACAGL 321


>ref|NP_176180.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|193806498|sp|Q0WQW5.2|PPR85_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g59720, mitochondrial; Flags: Precursor
           gi|332195486|gb|AEE33607.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 638

 Score =  120 bits (300), Expect = 2e-25
 Identities = 55/95 (57%), Positives = 67/95 (70%)
 Frame = -2

Query: 287 GSQLHSHIVKLGFSSDIYILNSLVHFYSSCARLSLARQLFDRMPLKNRVSWNIMIDGCVM 108
           G Q+H  IVK GF  D+Y+ N L+H Y SC  L LAR++FD MP ++ VSWN MID  V 
Sbjct: 170 GKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVR 229

Query: 107 CGEYETALELFRDMQSQFSPDAYTMQSALCACAAL 3
            GEY++AL+LFR+MQ  F PD YTMQS L ACA L
Sbjct: 230 FGEYDSALQLFREMQRSFEPDGYTMQSVLSACAGL 264


>dbj|BAF00484.1| hypothetical protein [Arabidopsis thaliana]
          Length = 629

 Score =  120 bits (300), Expect = 2e-25
 Identities = 55/95 (57%), Positives = 67/95 (70%)
 Frame = -2

Query: 287 GSQLHSHIVKLGFSSDIYILNSLVHFYSSCARLSLARQLFDRMPLKNRVSWNIMIDGCVM 108
           G Q+H  IVK GF  D+Y+ N L+H Y SC  L LAR++FD MP ++ VSWN MID  V 
Sbjct: 161 GKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVR 220

Query: 107 CGEYETALELFRDMQSQFSPDAYTMQSALCACAAL 3
            GEY++AL+LFR+MQ  F PD YTMQS L ACA L
Sbjct: 221 FGEYDSALQLFREMQRSFEPDGYTMQSVLSACAGL 255


>gb|AAD39314.1|AC007258_3 Hypothetical protein [Arabidopsis thaliana]
          Length = 615

 Score =  120 bits (300), Expect = 2e-25
 Identities = 55/95 (57%), Positives = 67/95 (70%)
 Frame = -2

Query: 287 GSQLHSHIVKLGFSSDIYILNSLVHFYSSCARLSLARQLFDRMPLKNRVSWNIMIDGCVM 108
           G Q+H  IVK GF  D+Y+ N L+H Y SC  L LAR++FD MP ++ VSWN MID  V 
Sbjct: 147 GKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVR 206

Query: 107 CGEYETALELFRDMQSQFSPDAYTMQSALCACAAL 3
            GEY++AL+LFR+MQ  F PD YTMQS L ACA L
Sbjct: 207 FGEYDSALQLFREMQRSFEPDGYTMQSVLSACAGL 241


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