BLASTX nr result

ID: Dioscorea21_contig00008378 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00008378
         (237 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556118.1| PREDICTED: uncharacterized protein LOC100799...    77   1e-12
ref|XP_002864174.1| HCF106 [Arabidopsis lyrata subsp. lyrata] gi...    74   1e-11
ref|XP_002513673.1| conserved hypothetical protein [Ricinus comm...    74   1e-11
ref|XP_002321929.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11
gb|ABK94883.1| unknown [Populus trichocarpa]                           74   2e-11

>ref|XP_003556118.1| PREDICTED: uncharacterized protein LOC100799045 [Glycine max]
          Length = 236

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 45/82 (54%), Positives = 50/82 (60%), Gaps = 6/82 (7%)
 Frame = +3

Query: 3   ARNLGNTLRAFQPTIKELQDVSRDFKNTLQREIGLDEVASTANNTNMXXXXXXXXXXXXX 182
           ARNLG TLRAFQPTI+ELQDVSR+FK+TL+REIGLD+  S   NT               
Sbjct: 108 ARNLGKTLRAFQPTIRELQDVSREFKSTLEREIGLDDNLSPTQNTYNSNVRNTTPTSSST 167

Query: 183 ADPNGTTTQDPV------EYLK 230
            DPNGT   DP       EYLK
Sbjct: 168 VDPNGTL--DPTKAYSSEEYLK 187


>ref|XP_002864174.1| HCF106 [Arabidopsis lyrata subsp. lyrata]
           gi|297310009|gb|EFH40433.1| HCF106 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 262

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 41/72 (56%), Positives = 47/72 (65%)
 Frame = +3

Query: 3   ARNLGNTLRAFQPTIKELQDVSRDFKNTLQREIGLDEVASTANNTNMXXXXXXXXXXXXX 182
           ARNLG TLR FQPTIKELQDVSRDFK+TL+REIGLDE+ ST N  N              
Sbjct: 115 ARNLGKTLRTFQPTIKELQDVSRDFKSTLEREIGLDEI-STPNVYNQNRTNLVQPPPPPP 173

Query: 183 ADPNGTTTQDPV 218
             P+  +T+ PV
Sbjct: 174 PPPSVPSTEAPV 185


>ref|XP_002513673.1| conserved hypothetical protein [Ricinus communis]
           gi|223547581|gb|EEF49076.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 255

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 45/89 (50%), Positives = 51/89 (57%), Gaps = 13/89 (14%)
 Frame = +3

Query: 3   ARNLGNTLRAFQPTIKELQDVSRDFKNTLQREIGLDEVAS---------TANNTNMXXXX 155
           ARNLG TLRAFQPTI+ELQDVSR+FK TL+REIGLD++ S          AN  +     
Sbjct: 115 ARNLGKTLRAFQPTIRELQDVSREFKTTLEREIGLDDIPSQRENMYSSNRANIASAPSSP 174

Query: 156 XXXXXXXXXADPNG----TTTQDPVEYLK 230
                    ADPNG    TT     EYLK
Sbjct: 175 ASNENSPTEADPNGAPSQTTAYTSEEYLK 203


>ref|XP_002321929.1| predicted protein [Populus trichocarpa] gi|222868925|gb|EEF06056.1|
           predicted protein [Populus trichocarpa]
          Length = 259

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 34/45 (75%), Positives = 41/45 (91%)
 Frame = +3

Query: 3   ARNLGNTLRAFQPTIKELQDVSRDFKNTLQREIGLDEVASTANNT 137
           ARNLG TLRAFQPTIKELQ+VSR+FK+TL+REIGLDE+++   NT
Sbjct: 118 ARNLGKTLRAFQPTIKELQEVSREFKSTLEREIGLDEISNQTQNT 162


>gb|ABK94883.1| unknown [Populus trichocarpa]
          Length = 259

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 34/45 (75%), Positives = 41/45 (91%)
 Frame = +3

Query: 3   ARNLGNTLRAFQPTIKELQDVSRDFKNTLQREIGLDEVASTANNT 137
           ARNLG TLRAFQPTIKELQ+VSR+FK+TL+REIGLDE+++   NT
Sbjct: 118 ARNLGKTLRAFQPTIKELQEVSREFKSTLEREIGLDEISNQTQNT 162


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