BLASTX nr result

ID: Dioscorea21_contig00008375 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00008375
         (875 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK95200.1| unknown [Populus trichocarpa]                          127   3e-27
ref|XP_002320236.1| predicted protein [Populus trichocarpa] gi|2...   125   2e-26
emb|CAN75451.1| hypothetical protein VITISV_028013 [Vitis vinifera]   122   8e-26
ref|XP_002266107.1| PREDICTED: thylakoid membrane phosphoprotein...   122   1e-25
ref|XP_004140528.1| PREDICTED: thylakoid membrane phosphoprotein...   120   3e-25

>gb|ABK95200.1| unknown [Populus trichocarpa]
          Length = 172

 Score =  127 bits (320), Expect = 3e-27
 Identities = 68/130 (52%), Positives = 91/130 (70%), Gaps = 7/130 (5%)
 Frame = -2

Query: 742 MASAACTLTSPALADSRVPARSK------SPIAIGLPSLPPPPNVASQGTSRISVFSPKR 581
           MAS + T  S + + S + A++       SP  + LP+LPPPP     G  + + +  ++
Sbjct: 1   MASTSSTPLSISSSSSLIDAKASRQSAAASPQCVSLPTLPPPPVQPQNGPWKATAYC-RK 59

Query: 580 LAQNVVAMATGEAPAQVA-TQLPEFVKTIQEAWDQVEDKYAVSSLAFAAAVGLWGSAGMI 404
           +A+NV+ MATGEAPA+VA T+LPE VKT+QEAWD+VEDKYAVSSL  A  V LWGS G+I
Sbjct: 60  IARNVMTMATGEAPAEVASTELPEIVKTVQEAWDKVEDKYAVSSLVVAGGVALWGSTGLI 119

Query: 403 SAIDRLPVVP 374
           SAIDRLP++P
Sbjct: 120 SAIDRLPLIP 129


>ref|XP_002320236.1| predicted protein [Populus trichocarpa] gi|222861009|gb|EEE98551.1|
           predicted protein [Populus trichocarpa]
          Length = 172

 Score =  125 bits (313), Expect = 2e-26
 Identities = 69/130 (53%), Positives = 90/130 (69%), Gaps = 7/130 (5%)
 Frame = -2

Query: 742 MASAACTLTSPALADSRVPARSK------SPIAIGLPSLPPPPNVASQGTSRISVFSPKR 581
           MAS + T  S + + S + A++       SP  + LP+LPPPP V  Q     +    ++
Sbjct: 1   MASTSSTPLSISSSSSLIDAKASRQSAAASPQCVSLPTLPPPP-VQPQNRPWKATAYCRK 59

Query: 580 LAQNVVAMATGEAPAQVA-TQLPEFVKTIQEAWDQVEDKYAVSSLAFAAAVGLWGSAGMI 404
           +A+NV+ MATGEAPA+VA T+LPE VKT+QEAWD+VEDKYAVSSL  A  V LWGS G+I
Sbjct: 60  IARNVMTMATGEAPAEVASTELPEIVKTVQEAWDKVEDKYAVSSLVVAGGVALWGSTGLI 119

Query: 403 SAIDRLPVVP 374
           SAIDRLP++P
Sbjct: 120 SAIDRLPLIP 129


>emb|CAN75451.1| hypothetical protein VITISV_028013 [Vitis vinifera]
          Length = 171

 Score =  122 bits (307), Expect = 8e-26
 Identities = 70/129 (54%), Positives = 89/129 (68%), Gaps = 6/129 (4%)
 Frame = -2

Query: 742 MASAACTLT---SPALADSRVPARSK--SPIAIGLPSLPPPPNVASQGTSRISVFSPKRL 578
           MAS    L+   S  L D + P +S   S   + LP+LPPPP V SQ          +++
Sbjct: 1   MASTTTPLSISSSSTLIDGKAPRQSAAASSQCVTLPTLPPPP-VPSQXRPGKGTTYCRKI 59

Query: 577 AQNVVAMATGEAPAQVAT-QLPEFVKTIQEAWDQVEDKYAVSSLAFAAAVGLWGSAGMIS 401
           A+NV+AMATGEAPA+V T ++PE +KT+QEAWD+VEDKYAVSSLA A  VGLW S GM+S
Sbjct: 60  ARNVIAMATGEAPAEVGTTEVPEIIKTVQEAWDKVEDKYAVSSLAAAGFVGLWVSTGMVS 119

Query: 400 AIDRLPVVP 374
           AID+LP+VP
Sbjct: 120 AIDKLPLVP 128


>ref|XP_002266107.1| PREDICTED: thylakoid membrane phosphoprotein 14 kDa, chloroplastic
           [Vitis vinifera] gi|296089017|emb|CBI38720.3| unnamed
           protein product [Vitis vinifera]
          Length = 171

 Score =  122 bits (306), Expect = 1e-25
 Identities = 70/129 (54%), Positives = 89/129 (68%), Gaps = 6/129 (4%)
 Frame = -2

Query: 742 MASAACTLT---SPALADSRVPARSK--SPIAIGLPSLPPPPNVASQGTSRISVFSPKRL 578
           MAS    L+   S  L D + P +S   S   + LP+LPPPP V SQ          +++
Sbjct: 1   MASTTTPLSISSSSTLIDGKAPRQSAAASSQCVTLPTLPPPP-VPSQHRPGKGTTYCRKI 59

Query: 577 AQNVVAMATGEAPAQVAT-QLPEFVKTIQEAWDQVEDKYAVSSLAFAAAVGLWGSAGMIS 401
           A+NV+AMATGEAPA+V T ++PE +KT+QEAWD+VEDKYAVSSLA A  VGLW S GM+S
Sbjct: 60  ARNVIAMATGEAPAEVGTTEVPEIIKTVQEAWDKVEDKYAVSSLAAAGFVGLWVSTGMVS 119

Query: 400 AIDRLPVVP 374
           AID+LP+VP
Sbjct: 120 AIDKLPLVP 128


>ref|XP_004140528.1| PREDICTED: thylakoid membrane phosphoprotein 14 kDa,
           chloroplastic-like [Cucumis sativus]
           gi|449518976|ref|XP_004166511.1| PREDICTED: thylakoid
           membrane phosphoprotein 14 kDa, chloroplastic-like
           [Cucumis sativus]
          Length = 175

 Score =  120 bits (302), Expect = 3e-25
 Identities = 66/129 (51%), Positives = 87/129 (67%), Gaps = 5/129 (3%)
 Frame = -2

Query: 745 SMASAACTLTSPALADSRVPARSKSPIA-IGLPSLPPPPNVASQGTSRISVFSPKRLAQN 569
           S +S     +S  L DS+ P +S SP + + LP+LP PP   SQ     S    +++A+N
Sbjct: 4   SSSSTFALSSSSTLLDSKAPRQSASPSSTVPLPTLPSPPTPLSQIRPWKSTAYCRKIARN 63

Query: 568 VVAMATGEAPAQVAT----QLPEFVKTIQEAWDQVEDKYAVSSLAFAAAVGLWGSAGMIS 401
           V+ MATGE PA+VA     ++PE VK +QEAWD+VEDKYAVSSLA +  V LW SAG++S
Sbjct: 64  VMGMATGEVPAEVAAGELAEMPEIVKKVQEAWDKVEDKYAVSSLAVSGFVALWASAGVVS 123

Query: 400 AIDRLPVVP 374
           AIDRLP+VP
Sbjct: 124 AIDRLPLVP 132


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