BLASTX nr result

ID: Dioscorea21_contig00008358 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00008358
         (535 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534256.1| conserved hypothetical protein [Ricinus comm...    82   4e-14
ref|XP_003531046.1| PREDICTED: F-box/kelch-repeat protein At1g22...    75   5e-12
ref|XP_003524750.1| PREDICTED: F-box/kelch-repeat protein At1g22...    70   1e-10
gb|ACU19665.1| unknown [Glycine max]                                   70   1e-10
emb|CBI19111.3| unnamed protein product [Vitis vinifera]               69   3e-10

>ref|XP_002534256.1| conserved hypothetical protein [Ricinus communis]
           gi|223525632|gb|EEF28126.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 469

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 42/70 (60%), Positives = 54/70 (77%)
 Frame = +3

Query: 324 MGSLLSAPVSRTKSLDDCETSQTESCKRLKMTVSCDDNSRLISSLPDEISLQILARVPRI 503
           MGS+LS   S+T +    E +Q ESCKR ++  SC+ N+RLI SLPDEIS+QILAR+PRI
Sbjct: 1   MGSILSVNSSKTVTSKVLEVTQIESCKRQRL--SCEGNARLIPSLPDEISIQILARIPRI 58

Query: 504 CYLSMKLVAK 533
           CYL MKLV++
Sbjct: 59  CYLKMKLVSR 68


>ref|XP_003531046.1| PREDICTED: F-box/kelch-repeat protein At1g22040-like [Glycine max]
          Length = 481

 Score = 75.5 bits (184), Expect = 5e-12
 Identities = 40/71 (56%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
 Frame = +3

Query: 324 MGSLLSAPVSRTKSLDDCETSQTESCKRLKMTV-SCDDNSRLISSLPDEISLQILARVPR 500
           MG++L+   S+T+  D     Q ESCKR +++  SC+DN RLI SLPDEIS+QILARVPR
Sbjct: 1   MGNILNLNNSKTRRNDSHGVLQGESCKRQRLSPNSCEDNPRLIPSLPDEISIQILARVPR 60

Query: 501 ICYLSMKLVAK 533
           I YL++KLV +
Sbjct: 61  IYYLNLKLVCR 71


>ref|XP_003524750.1| PREDICTED: F-box/kelch-repeat protein At1g22040-like [Glycine max]
          Length = 481

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 38/71 (53%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
 Frame = +3

Query: 324 MGSLLSAPVSRTKSLDDCETSQTESCKRLKMTVS-CDDNSRLISSLPDEISLQILARVPR 500
           MG++L+   S+T+  D     Q ESCKR +++ + C  N+RLI SLPDEIS+QILARVPR
Sbjct: 1   MGNILNLNNSKTRWKDSYGVLQGESCKRQRLSPNPCGYNARLIPSLPDEISIQILARVPR 60

Query: 501 ICYLSMKLVAK 533
           I YL++KLV +
Sbjct: 61  IYYLNLKLVCR 71


>gb|ACU19665.1| unknown [Glycine max]
          Length = 316

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 38/71 (53%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
 Frame = +3

Query: 324 MGSLLSAPVSRTKSLDDCETSQTESCKRLKMTVS-CDDNSRLISSLPDEISLQILARVPR 500
           MG++L+   S+T+  D     Q ESCKR +++ + C  N+RLI SLPDEIS+QILARVPR
Sbjct: 1   MGNILNLNNSKTRWKDSYGVLQGESCKRQRLSPNPCGYNARLIPSLPDEISIQILARVPR 60

Query: 501 ICYLSMKLVAK 533
           I YL++KLV +
Sbjct: 61  IYYLNLKLVCR 71


>emb|CBI19111.3| unnamed protein product [Vitis vinifera]
          Length = 274

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 36/71 (50%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
 Frame = +3

Query: 324 MGSLLSAPVSRTKSLDDCETSQTESCKRLKMTVSC-DDNSRLISSLPDEISLQILARVPR 500
           MGS LS    ++++ +  E SQ E+CKR +M+ S  ++N RLI SLPDEIS+ ILAR+PR
Sbjct: 1   MGSFLSLAGPKSRTSEHDEGSQHETCKRQRMSSSFNEENPRLIPSLPDEISILILARLPR 60

Query: 501 ICYLSMKLVAK 533
           ICY  ++LV++
Sbjct: 61  ICYFDLRLVSR 71


Top