BLASTX nr result

ID: Dioscorea21_contig00008320 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00008320
         (1146 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270323.2| PREDICTED: putative DNA repair protein RAD23...   248   3e-63
emb|CBI25247.3| unnamed protein product [Vitis vinifera]              247   3e-63
ref|XP_003543714.1| PREDICTED: putative DNA repair protein RAD23...   239   1e-60
ref|XP_003543713.1| PREDICTED: putative DNA repair protein RAD23...   239   1e-60
ref|XP_004164899.1| PREDICTED: putative DNA repair protein RAD23...   233   9e-59

>ref|XP_002270323.2| PREDICTED: putative DNA repair protein RAD23-1-like [Vitis
           vinifera]
          Length = 400

 Score =  248 bits (632), Expect = 3e-63
 Identities = 128/187 (68%), Positives = 142/187 (75%)
 Frame = +3

Query: 3   VEYLYSGXXXXXXXXXXXXTNPLNQSGLGGNATDAAITGLPNSSPLDMFPQXXXXXXXXX 182
           V+YLYSG              P +Q    G A  A  +G+PNSSPL+MFPQ         
Sbjct: 211 VDYLYSGIPEAAEVAVPVAHFPADQETGSGAAPAAPASGVPNSSPLNMFPQETLSGAAGG 270

Query: 183 XXXXLEFLRNNQQFQALRAMVQANPQILQPMLQELAKQNPHLLRLIQEHHAEFLQLINEP 362
               LEFLRNN QFQALRAMVQANPQILQPMLQEL KQNPHLLRLIQEHHAEFLQLINEP
Sbjct: 271 GLGSLEFLRNNHQFQALRAMVQANPQILQPMLQELGKQNPHLLRLIQEHHAEFLQLINEP 330

Query: 363 VEGVEGDLFDQPEQEMPNTISVTPSEQAAIERLEAMGFDRPRVIEAFLACDRDEQLAANY 542
           +EG EGD+FDQPEQE+P+ I+VTP+EQ AIERLEAMGFDR  VIEAFLACDR+E+LA NY
Sbjct: 331 LEGSEGDIFDQPEQELPHAINVTPAEQEAIERLEAMGFDRALVIEAFLACDRNEELAVNY 390

Query: 543 LLEHAGD 563
           LLE+AGD
Sbjct: 391 LLENAGD 397


>emb|CBI25247.3| unnamed protein product [Vitis vinifera]
          Length = 399

 Score =  247 bits (631), Expect = 3e-63
 Identities = 129/187 (68%), Positives = 143/187 (76%)
 Frame = +3

Query: 3   VEYLYSGXXXXXXXXXXXXTNPLNQSGLGGNATDAAITGLPNSSPLDMFPQXXXXXXXXX 182
           V+YLYSG              P +Q   GG A  A  +G+PNSSPL+MFPQ         
Sbjct: 211 VDYLYSGIPEAAEVAVPVAHFPADQE-TGGAAPAAPASGVPNSSPLNMFPQETLSGAAGG 269

Query: 183 XXXXLEFLRNNQQFQALRAMVQANPQILQPMLQELAKQNPHLLRLIQEHHAEFLQLINEP 362
               LEFLRNN QFQALRAMVQANPQILQPMLQEL KQNPHLLRLIQEHHAEFLQLINEP
Sbjct: 270 GLGSLEFLRNNHQFQALRAMVQANPQILQPMLQELGKQNPHLLRLIQEHHAEFLQLINEP 329

Query: 363 VEGVEGDLFDQPEQEMPNTISVTPSEQAAIERLEAMGFDRPRVIEAFLACDRDEQLAANY 542
           +EG EGD+FDQPEQE+P+ I+VTP+EQ AIERLEAMGFDR  VIEAFLACDR+E+LA NY
Sbjct: 330 LEGSEGDIFDQPEQELPHAINVTPAEQEAIERLEAMGFDRALVIEAFLACDRNEELAVNY 389

Query: 543 LLEHAGD 563
           LLE+AGD
Sbjct: 390 LLENAGD 396


>ref|XP_003543714.1| PREDICTED: putative DNA repair protein RAD23-1-like isoform 2
           [Glycine max]
          Length = 353

 Score =  239 bits (609), Expect = 1e-60
 Identities = 124/187 (66%), Positives = 143/187 (76%)
 Frame = +3

Query: 3   VEYLYSGXXXXXXXXXXXXTNPLNQSGLGGNATDAAITGLPNSSPLDMFPQXXXXXXXXX 182
           V+YLYSG            + P++Q+   G A+  A+ G+PNSSPL+MFPQ         
Sbjct: 165 VDYLYSGIPVAAEIAVPAASYPISQTTETGGASVGAVPGVPNSSPLNMFPQETISGAGAE 224

Query: 183 XXXXLEFLRNNQQFQALRAMVQANPQILQPMLQELAKQNPHLLRLIQEHHAEFLQLINEP 362
               L+FLRNN QFQALR+MVQ+NPQILQP+LQEL KQNP LL LIQEHHAEFLQLINEP
Sbjct: 225 IGS-LDFLRNNPQFQALRSMVQSNPQILQPVLQELGKQNPSLLTLIQEHHAEFLQLINEP 283

Query: 363 VEGVEGDLFDQPEQEMPNTISVTPSEQAAIERLEAMGFDRPRVIEAFLACDRDEQLAANY 542
           VEG EGD+FDQPEQ+MP+ I+VTP+EQ AI RLEAMGFDR  VIEAFLACD DEQLAANY
Sbjct: 284 VEGSEGDIFDQPEQDMPHAINVTPAEQEAIGRLEAMGFDRASVIEAFLACDHDEQLAANY 343

Query: 543 LLEHAGD 563
           LLE+AGD
Sbjct: 344 LLENAGD 350


>ref|XP_003543713.1| PREDICTED: putative DNA repair protein RAD23-1-like isoform 1
           [Glycine max]
          Length = 367

 Score =  239 bits (609), Expect = 1e-60
 Identities = 124/187 (66%), Positives = 143/187 (76%)
 Frame = +3

Query: 3   VEYLYSGXXXXXXXXXXXXTNPLNQSGLGGNATDAAITGLPNSSPLDMFPQXXXXXXXXX 182
           V+YLYSG            + P++Q+   G A+  A+ G+PNSSPL+MFPQ         
Sbjct: 179 VDYLYSGIPVAAEIAVPAASYPISQTTETGGASVGAVPGVPNSSPLNMFPQETISGAGAE 238

Query: 183 XXXXLEFLRNNQQFQALRAMVQANPQILQPMLQELAKQNPHLLRLIQEHHAEFLQLINEP 362
               L+FLRNN QFQALR+MVQ+NPQILQP+LQEL KQNP LL LIQEHHAEFLQLINEP
Sbjct: 239 IGS-LDFLRNNPQFQALRSMVQSNPQILQPVLQELGKQNPSLLTLIQEHHAEFLQLINEP 297

Query: 363 VEGVEGDLFDQPEQEMPNTISVTPSEQAAIERLEAMGFDRPRVIEAFLACDRDEQLAANY 542
           VEG EGD+FDQPEQ+MP+ I+VTP+EQ AI RLEAMGFDR  VIEAFLACD DEQLAANY
Sbjct: 298 VEGSEGDIFDQPEQDMPHAINVTPAEQEAIGRLEAMGFDRASVIEAFLACDHDEQLAANY 357

Query: 543 LLEHAGD 563
           LLE+AGD
Sbjct: 358 LLENAGD 364


>ref|XP_004164899.1| PREDICTED: putative DNA repair protein RAD23-1-like, partial
           [Cucumis sativus]
          Length = 386

 Score =  233 bits (593), Expect = 9e-59
 Identities = 123/190 (64%), Positives = 139/190 (73%), Gaps = 3/190 (1%)
 Frame = +3

Query: 3   VEYLYSGXXXXXXXXXXXXTNPLNQSGLGGNATDAAITGLPNSSPLDMFPQXXXXXXXXX 182
           V+YLYSG              P  Q    G AT   ++G PNSSPL+MFPQ         
Sbjct: 194 VDYLYSGIPETAEVAAPVARPPTGQPIDAGGATAPPVSGGPNSSPLNMFPQESLAAAAGG 253

Query: 183 XXXXL---EFLRNNQQFQALRAMVQANPQILQPMLQELAKQNPHLLRLIQEHHAEFLQLI 353
               L   EFLRNN QFQALR+MVQANPQILQ MLQEL KQNP LLRLIQ+H AEFLQLI
Sbjct: 254 GGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQLI 313

Query: 354 NEPVEGVEGDLFDQPEQEMPNTISVTPSEQAAIERLEAMGFDRPRVIEAFLACDRDEQLA 533
           NEP+EG EGDLFDQP+Q+MP+ I+VTP+EQ AIERLEAMGFDR +VIEAFLACDR+E+LA
Sbjct: 314 NEPLEGFEGDLFDQPDQDMPHAINVTPAEQQAIERLEAMGFDRDQVIEAFLACDRNEELA 373

Query: 534 ANYLLEHAGD 563
           ANYLLEH G+
Sbjct: 374 ANYLLEHGGE 383


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