BLASTX nr result
ID: Dioscorea21_contig00008307
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00008307 (789 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003631888.1| PREDICTED: zinc finger CCCH domain-containin... 122 1e-25 ref|XP_002278934.2| PREDICTED: zinc finger CCCH domain-containin... 122 1e-25 ref|XP_002512627.1| nucleic acid binding protein, putative [Rici... 119 6e-25 ref|XP_003534518.1| PREDICTED: zinc finger CCCH domain-containin... 119 8e-25 ref|XP_003534517.1| PREDICTED: zinc finger CCCH domain-containin... 119 8e-25 >ref|XP_003631888.1| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like isoform 2 [Vitis vinifera] Length = 393 Score = 122 bits (305), Expect = 1e-25 Identities = 62/108 (57%), Positives = 68/108 (62%), Gaps = 12/108 (11%) Frame = +1 Query: 1 PDCLLSPIGLPLRPGEPLCIFYSRYGICKFGPNCKFDHPMGTVTYNLSASPTADISAVPR 180 PDC+LSPIGLPLRPGEPLCIFYSRYGICKFGP+CKFDHPMG YNLSAS +AD V R Sbjct: 286 PDCVLSPIGLPLRPGEPLCIFYSRYGICKFGPSCKFDHPMGIFAYNLSASSSADAPVVRR 345 Query: 181 LLGSFSG------------XXXXXXXXXXXXXXXRQMTSGEENSEAEG 288 LLGS SG RQM G++N + EG Sbjct: 346 LLGSSSGSAALTLSSDGLVEAGSTKPRRLSLPETRQMPPGDDNIDTEG 393 >ref|XP_002278934.2| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like isoform 1 [Vitis vinifera] Length = 441 Score = 122 bits (305), Expect = 1e-25 Identities = 62/108 (57%), Positives = 68/108 (62%), Gaps = 12/108 (11%) Frame = +1 Query: 1 PDCLLSPIGLPLRPGEPLCIFYSRYGICKFGPNCKFDHPMGTVTYNLSASPTADISAVPR 180 PDC+LSPIGLPLRPGEPLCIFYSRYGICKFGP+CKFDHPMG YNLSAS +AD V R Sbjct: 334 PDCVLSPIGLPLRPGEPLCIFYSRYGICKFGPSCKFDHPMGIFAYNLSASSSADAPVVRR 393 Query: 181 LLGSFSG------------XXXXXXXXXXXXXXXRQMTSGEENSEAEG 288 LLGS SG RQM G++N + EG Sbjct: 394 LLGSSSGSAALTLSSDGLVEAGSTKPRRLSLPETRQMPPGDDNIDTEG 441 >ref|XP_002512627.1| nucleic acid binding protein, putative [Ricinus communis] gi|223548588|gb|EEF50079.1| nucleic acid binding protein, putative [Ricinus communis] Length = 448 Score = 119 bits (299), Expect = 6e-25 Identities = 62/108 (57%), Positives = 70/108 (64%), Gaps = 12/108 (11%) Frame = +1 Query: 1 PDCLLSPIGLPLRPGEPLCIFYSRYGICKFGPNCKFDHPMGTVTYNLSASPTADISAVPR 180 PDC+LSPIGLPLRPGEPLCIFYSRYG+CKFGP+CKFDHPMG TYNLSA +AD + V R Sbjct: 342 PDCVLSPIGLPLRPGEPLCIFYSRYGVCKFGPSCKFDHPMGIFTYNLSAPSSAD-APVRR 400 Query: 181 LLGSFSG------------XXXXXXXXXXXXXXXRQMTSGEENSEAEG 288 LLGS SG RQM SG++N + EG Sbjct: 401 LLGSSSGSAALTLSTEGLVDAGSTKPRRLSLSEPRQMPSGDDNIDTEG 448 >ref|XP_003534518.1| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like isoform 2 [Glycine max] Length = 426 Score = 119 bits (298), Expect = 8e-25 Identities = 60/108 (55%), Positives = 70/108 (64%), Gaps = 12/108 (11%) Frame = +1 Query: 1 PDCLLSPIGLPLRPGEPLCIFYSRYGICKFGPNCKFDHPMGTVTYNLSASPTADISAVPR 180 PDC+LSPIGLPLRPGEPLC+FYSRYGICKFGP+CKFDHPMG TYN+SASP+AD R Sbjct: 320 PDCVLSPIGLPLRPGEPLCVFYSRYGICKFGPSCKFDHPMGVFTYNISASPSADAPG-RR 378 Query: 181 LLGSFSG------------XXXXXXXXXXXXXXXRQMTSGEENSEAEG 288 +LGS SG RQ+ SG++N + EG Sbjct: 379 MLGSSSGTSALNLSSEGLVESGSANPRRLSLSETRQIPSGDDNIDEEG 426 >ref|XP_003534517.1| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like isoform 1 [Glycine max] Length = 428 Score = 119 bits (298), Expect = 8e-25 Identities = 60/108 (55%), Positives = 70/108 (64%), Gaps = 12/108 (11%) Frame = +1 Query: 1 PDCLLSPIGLPLRPGEPLCIFYSRYGICKFGPNCKFDHPMGTVTYNLSASPTADISAVPR 180 PDC+LSPIGLPLRPGEPLC+FYSRYGICKFGP+CKFDHPMG TYN+SASP+AD R Sbjct: 322 PDCVLSPIGLPLRPGEPLCVFYSRYGICKFGPSCKFDHPMGVFTYNISASPSADAPG-RR 380 Query: 181 LLGSFSG------------XXXXXXXXXXXXXXXRQMTSGEENSEAEG 288 +LGS SG RQ+ SG++N + EG Sbjct: 381 MLGSSSGTSALNLSSEGLVESGSANPRRLSLSETRQIPSGDDNIDEEG 428