BLASTX nr result

ID: Dioscorea21_contig00008307 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00008307
         (789 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631888.1| PREDICTED: zinc finger CCCH domain-containin...   122   1e-25
ref|XP_002278934.2| PREDICTED: zinc finger CCCH domain-containin...   122   1e-25
ref|XP_002512627.1| nucleic acid binding protein, putative [Rici...   119   6e-25
ref|XP_003534518.1| PREDICTED: zinc finger CCCH domain-containin...   119   8e-25
ref|XP_003534517.1| PREDICTED: zinc finger CCCH domain-containin...   119   8e-25

>ref|XP_003631888.1| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like
           isoform 2 [Vitis vinifera]
          Length = 393

 Score =  122 bits (305), Expect = 1e-25
 Identities = 62/108 (57%), Positives = 68/108 (62%), Gaps = 12/108 (11%)
 Frame = +1

Query: 1   PDCLLSPIGLPLRPGEPLCIFYSRYGICKFGPNCKFDHPMGTVTYNLSASPTADISAVPR 180
           PDC+LSPIGLPLRPGEPLCIFYSRYGICKFGP+CKFDHPMG   YNLSAS +AD   V R
Sbjct: 286 PDCVLSPIGLPLRPGEPLCIFYSRYGICKFGPSCKFDHPMGIFAYNLSASSSADAPVVRR 345

Query: 181 LLGSFSG------------XXXXXXXXXXXXXXXRQMTSGEENSEAEG 288
           LLGS SG                           RQM  G++N + EG
Sbjct: 346 LLGSSSGSAALTLSSDGLVEAGSTKPRRLSLPETRQMPPGDDNIDTEG 393


>ref|XP_002278934.2| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like
           isoform 1 [Vitis vinifera]
          Length = 441

 Score =  122 bits (305), Expect = 1e-25
 Identities = 62/108 (57%), Positives = 68/108 (62%), Gaps = 12/108 (11%)
 Frame = +1

Query: 1   PDCLLSPIGLPLRPGEPLCIFYSRYGICKFGPNCKFDHPMGTVTYNLSASPTADISAVPR 180
           PDC+LSPIGLPLRPGEPLCIFYSRYGICKFGP+CKFDHPMG   YNLSAS +AD   V R
Sbjct: 334 PDCVLSPIGLPLRPGEPLCIFYSRYGICKFGPSCKFDHPMGIFAYNLSASSSADAPVVRR 393

Query: 181 LLGSFSG------------XXXXXXXXXXXXXXXRQMTSGEENSEAEG 288
           LLGS SG                           RQM  G++N + EG
Sbjct: 394 LLGSSSGSAALTLSSDGLVEAGSTKPRRLSLPETRQMPPGDDNIDTEG 441


>ref|XP_002512627.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223548588|gb|EEF50079.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 448

 Score =  119 bits (299), Expect = 6e-25
 Identities = 62/108 (57%), Positives = 70/108 (64%), Gaps = 12/108 (11%)
 Frame = +1

Query: 1   PDCLLSPIGLPLRPGEPLCIFYSRYGICKFGPNCKFDHPMGTVTYNLSASPTADISAVPR 180
           PDC+LSPIGLPLRPGEPLCIFYSRYG+CKFGP+CKFDHPMG  TYNLSA  +AD + V R
Sbjct: 342 PDCVLSPIGLPLRPGEPLCIFYSRYGVCKFGPSCKFDHPMGIFTYNLSAPSSAD-APVRR 400

Query: 181 LLGSFSG------------XXXXXXXXXXXXXXXRQMTSGEENSEAEG 288
           LLGS SG                           RQM SG++N + EG
Sbjct: 401 LLGSSSGSAALTLSTEGLVDAGSTKPRRLSLSEPRQMPSGDDNIDTEG 448


>ref|XP_003534518.1| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like
           isoform 2 [Glycine max]
          Length = 426

 Score =  119 bits (298), Expect = 8e-25
 Identities = 60/108 (55%), Positives = 70/108 (64%), Gaps = 12/108 (11%)
 Frame = +1

Query: 1   PDCLLSPIGLPLRPGEPLCIFYSRYGICKFGPNCKFDHPMGTVTYNLSASPTADISAVPR 180
           PDC+LSPIGLPLRPGEPLC+FYSRYGICKFGP+CKFDHPMG  TYN+SASP+AD     R
Sbjct: 320 PDCVLSPIGLPLRPGEPLCVFYSRYGICKFGPSCKFDHPMGVFTYNISASPSADAPG-RR 378

Query: 181 LLGSFSG------------XXXXXXXXXXXXXXXRQMTSGEENSEAEG 288
           +LGS SG                           RQ+ SG++N + EG
Sbjct: 379 MLGSSSGTSALNLSSEGLVESGSANPRRLSLSETRQIPSGDDNIDEEG 426


>ref|XP_003534517.1| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like
           isoform 1 [Glycine max]
          Length = 428

 Score =  119 bits (298), Expect = 8e-25
 Identities = 60/108 (55%), Positives = 70/108 (64%), Gaps = 12/108 (11%)
 Frame = +1

Query: 1   PDCLLSPIGLPLRPGEPLCIFYSRYGICKFGPNCKFDHPMGTVTYNLSASPTADISAVPR 180
           PDC+LSPIGLPLRPGEPLC+FYSRYGICKFGP+CKFDHPMG  TYN+SASP+AD     R
Sbjct: 322 PDCVLSPIGLPLRPGEPLCVFYSRYGICKFGPSCKFDHPMGVFTYNISASPSADAPG-RR 380

Query: 181 LLGSFSG------------XXXXXXXXXXXXXXXRQMTSGEENSEAEG 288
           +LGS SG                           RQ+ SG++N + EG
Sbjct: 381 MLGSSSGTSALNLSSEGLVESGSANPRRLSLSETRQIPSGDDNIDEEG 428


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