BLASTX nr result

ID: Dioscorea21_contig00008290 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00008290
         (455 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523698.1| AMP dependent CoA ligase, putative [Ricinus ...   125   4e-27
ref|XP_002276353.1| PREDICTED: 4-coumarate--CoA ligase-like 7 [V...   123   2e-26
ref|XP_002305282.1| 4-coumarate-coa ligase [Populus trichocarpa]...   122   4e-26
emb|CAN70560.1| hypothetical protein VITISV_031619 [Vitis vinifera]   119   2e-25
ref|XP_002329323.1| 4-coumarate-coa ligase [Populus trichocarpa]...   119   3e-25

>ref|XP_002523698.1| AMP dependent CoA ligase, putative [Ricinus communis]
           gi|223537002|gb|EEF38638.1| AMP dependent CoA ligase,
           putative [Ricinus communis]
          Length = 542

 Score =  125 bits (314), Expect = 4e-27
 Identities = 73/153 (47%), Positives = 92/153 (60%), Gaps = 2/153 (1%)
 Frame = -1

Query: 455 FSDLLSLIPRAALGLSRRLGVTRNSVVLIFAPNSIDFPVCFXXXXXXXXXXXTVNPLYTV 276
           FS L S++ + + GL + LG+++N VVLIFAPNS  FP+CF           T NPLYT 
Sbjct: 57  FSQLKSIVIKVSHGLLK-LGISKNDVVLIFAPNSYQFPICFLAITSIGAIATTANPLYTT 115

Query: 275 PELSKQAQDSGASVVITVPDLWPKVRNLNLPTXXXXXXXXXXXXXXXXITFFSDLIAHDG 96
            E+SKQ +DS   +VITVP+LW KV++ NLP                 I  F  L+   G
Sbjct: 116 TEISKQIKDSNPKLVITVPELWNKVKDFNLPAVFLGAKESLLIEPNSRIKSFDHLVELGG 175

Query: 95  --SEFIPPPIQQTDIAALLYSSGTTGLSKGVIL 3
             SEF    ++QTDIA LLYSSGTTG+SKGVIL
Sbjct: 176 SNSEFPTINVKQTDIATLLYSSGTTGISKGVIL 208


>ref|XP_002276353.1| PREDICTED: 4-coumarate--CoA ligase-like 7 [Vitis vinifera]
          Length = 544

 Score =  123 bits (308), Expect = 2e-26
 Identities = 75/155 (48%), Positives = 93/155 (60%), Gaps = 4/155 (2%)
 Frame = -1

Query: 455 FSDLLSLIPRAALGLSRRLGVTRNSVVLIFAPNSIDFPVCFXXXXXXXXXXXTVNPLYTV 276
           F+   S++ + + GL+R LG+ +N VVLIFAPNSI +P+CF           T NPLYTV
Sbjct: 57  FAQFKSMVIKVSHGLTR-LGLKKNDVVLIFAPNSIQYPLCFFGVIAIGAIATTANPLYTV 115

Query: 275 PELSKQAQDSGASVVITVPDLWPKVRNLNLPT--XXXXXXXXXXXXXXXXITFFSDLI-- 108
            E+ KQ +DS A +VIT+P LW KV+ LNLP                   IT+FSDL+  
Sbjct: 116 AEIQKQVKDSNAKLVITIPQLWEKVKALNLPAVILDSADTSKDTIQSPLKITYFSDLVKM 175

Query: 107 AHDGSEFIPPPIQQTDIAALLYSSGTTGLSKGVIL 3
           A + S F    I Q D AALLYSSGTTG SKGVIL
Sbjct: 176 AGEVSHFPKVSITQGDTAALLYSSGTTGASKGVIL 210


>ref|XP_002305282.1| 4-coumarate-coa ligase [Populus trichocarpa]
           gi|222848246|gb|EEE85793.1| 4-coumarate-coa ligase
           [Populus trichocarpa]
          Length = 543

 Score =  122 bits (305), Expect = 4e-26
 Identities = 72/154 (46%), Positives = 92/154 (59%), Gaps = 3/154 (1%)
 Frame = -1

Query: 455 FSDLLSLIPRAALGLSRRLGVTRNSVVLIFAPNSIDFPVCFXXXXXXXXXXXTVNPLYTV 276
           FS+L S++ + A GL   LG+++N VVLIFAPNS  FP+CF           T NPLYT 
Sbjct: 57  FSELKSIVIKVAHGLLN-LGISKNDVVLIFAPNSYQFPICFLAITSTGAIATTANPLYTT 115

Query: 275 PELSKQAQDSGASVVITVPDLWPKVRNLNLP-TXXXXXXXXXXXXXXXXITFFSDLIAHD 99
            ELSKQ +DS   ++ITVP+LW KV+  NLP                  IT F  L+   
Sbjct: 116 SELSKQIKDSNPKLIITVPELWDKVKGFNLPAVFLGPKRVSLPLESGSRITSFDSLVGLG 175

Query: 98  G--SEFIPPPIQQTDIAALLYSSGTTGLSKGVIL 3
           G  S+F    ++Q+DI+ LLYSSGTTG+SKGVIL
Sbjct: 176 GSNSQFPSSNVKQSDISTLLYSSGTTGVSKGVIL 209


>emb|CAN70560.1| hypothetical protein VITISV_031619 [Vitis vinifera]
          Length = 663

 Score =  119 bits (299), Expect = 2e-25
 Identities = 74/155 (47%), Positives = 90/155 (58%), Gaps = 4/155 (2%)
 Frame = -1

Query: 455 FSDLLSLIPRAALGLSRRLGVTRNSVVLIFAPNSIDFPVCFXXXXXXXXXXXTVNPLYTV 276
           F    S++ + + GL+R LG+ +N VVLIFAPNSI +P+CF           T NPLYTV
Sbjct: 140 FXQFKSMVIKVSHGLTR-LGLKKNDVVLIFAPNSIQYPLCFFGVIAIGAIATTANPLYTV 198

Query: 275 PELSKQAQDSGASVVITVPDLWPKVRNLNLPT--XXXXXXXXXXXXXXXXITFFSDLI-- 108
            E  KQ +DS   +VIT+P LW KV+ LNLP                   IT+FSDL+  
Sbjct: 199 AEXQKQVKDSNPKLVITIPQLWEKVKALNLPAVILDSADTSKDTIQSPLKITYFSDLVKM 258

Query: 107 AHDGSEFIPPPIQQTDIAALLYSSGTTGLSKGVIL 3
           A + S F    I Q D AALLYSSGTTG SKGVIL
Sbjct: 259 AGEVSHFPKASITQGDTAALLYSSGTTGASKGVIL 293


>ref|XP_002329323.1| 4-coumarate-coa ligase [Populus trichocarpa]
           gi|224127626|ref|XP_002329324.1| acyl:coa ligase
           [Populus trichocarpa] gi|222870777|gb|EEF07908.1|
           4-coumarate-coa ligase [Populus trichocarpa]
           gi|222870778|gb|EEF07909.1| acyl:coa ligase [Populus
           trichocarpa]
          Length = 543

 Score =  119 bits (298), Expect = 3e-25
 Identities = 73/154 (47%), Positives = 90/154 (58%), Gaps = 3/154 (1%)
 Frame = -1

Query: 455 FSDLLSLIPRAALGLSRRLGVTRNSVVLIFAPNSIDFPVCFXXXXXXXXXXXTVNPLYTV 276
           FS+L S++ + A GL   LG+++N V+LIFAPNS  FP CF           T NPLYT 
Sbjct: 57  FSELKSIVIKFAHGLLN-LGISKNDVILIFAPNSYQFPTCFLAITSIGAVATTANPLYTT 115

Query: 275 PELSKQAQDSGASVVITVPDLWPKVRNLNLP-TXXXXXXXXXXXXXXXXITFFSDLIAHD 99
            ELSKQ +DS   +VITVP+LW KV+  NLP                  I  F  L+   
Sbjct: 116 SELSKQIKDSNPKLVITVPELWDKVKGFNLPAVFLGPKEVSLPLESGSRIRSFHSLVELG 175

Query: 98  G--SEFIPPPIQQTDIAALLYSSGTTGLSKGVIL 3
           G  SEF    ++Q+DIA LLYSSGTTG+SKGVIL
Sbjct: 176 GSNSEFPVSDVKQSDIATLLYSSGTTGVSKGVIL 209


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