BLASTX nr result

ID: Dioscorea21_contig00008256 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00008256
         (648 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269873.2| PREDICTED: DEAD-box ATP-dependent RNA helica...   128   8e-28
gb|ABG73436.1| DEAD/DEAH box helicase family protein [Oryza brac...   128   1e-27
ref|XP_003536498.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   126   3e-27
ref|XP_003556075.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   126   4e-27
gb|EAZ09787.1| hypothetical protein OsI_32075 [Oryza sativa Indi...   125   5e-27

>ref|XP_002269873.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 7-like [Vitis
           vinifera]
          Length = 711

 Score =  128 bits (322), Expect = 8e-28
 Identities = 64/72 (88%), Positives = 69/72 (95%)
 Frame = -2

Query: 221 KNPNAVSNFRISEPLREKLKSKGIGSLFPIQAMTFDVILDGSDLVGRARTGQGKTLAFVL 42
           +NPNA+SNFRISEPLREKLKSKGI +LFPIQAMTFD ILDGSDLVGRARTGQGKTLAFVL
Sbjct: 116 ENPNALSNFRISEPLREKLKSKGIEALFPIQAMTFDTILDGSDLVGRARTGQGKTLAFVL 175

Query: 41  PILESLINGKHK 6
           PILESLING ++
Sbjct: 176 PILESLINGPNR 187


>gb|ABG73436.1| DEAD/DEAH box helicase family protein [Oryza brachyantha]
          Length = 688

 Score =  128 bits (321), Expect = 1e-27
 Identities = 62/72 (86%), Positives = 69/72 (95%)
 Frame = -2

Query: 218 NPNAVSNFRISEPLREKLKSKGIGSLFPIQAMTFDVILDGSDLVGRARTGQGKTLAFVLP 39
           +PNA++NFRISEPLREKLKSKGI +LFPIQA TFD++LDG DLVGRARTGQGKTLAFVLP
Sbjct: 104 DPNALANFRISEPLREKLKSKGIKALFPIQATTFDLVLDGHDLVGRARTGQGKTLAFVLP 163

Query: 38  ILESLINGKHKA 3
           ILESL+NGKHKA
Sbjct: 164 ILESLVNGKHKA 175


>ref|XP_003536498.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 7-like [Glycine max]
          Length = 697

 Score =  126 bits (317), Expect = 3e-27
 Identities = 63/72 (87%), Positives = 67/72 (93%)
 Frame = -2

Query: 218 NPNAVSNFRISEPLREKLKSKGIGSLFPIQAMTFDVILDGSDLVGRARTGQGKTLAFVLP 39
           +PNA+SNFRISEPLREKLK KGI SLFPIQAMTFD +LDGSDLVGRARTGQGKTLAFVLP
Sbjct: 116 DPNAISNFRISEPLREKLKEKGIESLFPIQAMTFDTVLDGSDLVGRARTGQGKTLAFVLP 175

Query: 38  ILESLINGKHKA 3
           ILESLING  K+
Sbjct: 176 ILESLINGPAKS 187


>ref|XP_003556075.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 7-like [Glycine max]
          Length = 693

 Score =  126 bits (316), Expect = 4e-27
 Identities = 63/73 (86%), Positives = 68/73 (93%)
 Frame = -2

Query: 221 KNPNAVSNFRISEPLREKLKSKGIGSLFPIQAMTFDVILDGSDLVGRARTGQGKTLAFVL 42
           ++PNA+SNFRISEPLR+KLK KGI SLFPIQAMTFD +LDGSDLVGRARTGQGKTLAFVL
Sbjct: 110 EDPNALSNFRISEPLRQKLKEKGIESLFPIQAMTFDTVLDGSDLVGRARTGQGKTLAFVL 169

Query: 41  PILESLINGKHKA 3
           PILESLING  KA
Sbjct: 170 PILESLINGPTKA 182


>gb|EAZ09787.1| hypothetical protein OsI_32075 [Oryza sativa Indica Group]
          Length = 685

 Score =  125 bits (315), Expect = 5e-27
 Identities = 61/72 (84%), Positives = 68/72 (94%)
 Frame = -2

Query: 218 NPNAVSNFRISEPLREKLKSKGIGSLFPIQAMTFDVILDGSDLVGRARTGQGKTLAFVLP 39
           +PNA++NFRISEPLREKLKSKGI +LFPIQA TFD++LDG DLVGRARTGQGKTLAFVLP
Sbjct: 102 DPNALANFRISEPLREKLKSKGIKALFPIQATTFDLVLDGHDLVGRARTGQGKTLAFVLP 161

Query: 38  ILESLINGKHKA 3
           ILESL+NG HKA
Sbjct: 162 ILESLVNGTHKA 173


Top