BLASTX nr result
ID: Dioscorea21_contig00008251
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00008251
(1697 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI19136.3| unnamed protein product [Vitis vinifera] 249 1e-99
ref|XP_002284214.1| PREDICTED: uncharacterized ATP-dependent hel... 242 2e-97
emb|CAN65841.1| hypothetical protein VITISV_009619 [Vitis vinifera] 249 1e-95
ref|XP_003529830.1| PREDICTED: probable helicase senataxin-like ... 237 4e-95
ref|XP_003547681.1| PREDICTED: uncharacterized ATP-dependent hel... 234 2e-93
>emb|CBI19136.3| unnamed protein product [Vitis vinifera]
Length = 1073
Score = 249 bits (636), Expect(3) = 1e-99
Identities = 126/189 (66%), Positives = 140/189 (74%)
Frame = -2
Query: 568 PVQECKWNFKEGDXXXXXXXXXXXXXXSNKRNIHAGASEEDXXXXXXXXXXXXXXRHIPT 389
P ECKW FKEGD +KRN + + E+D RH P
Sbjct: 431 PANECKWTFKEGDVAILSAPRPGSVR--SKRN-NTSSIEDDEEAEISGRVAGTVRRHNPI 487
Query: 388 DTRDPLGAILHFYVGDSYDCSSKGADDHIVRKFQPKSIWYLTVLGSLATTQREYIALHAF 209
DTRDP+GAILHFYVGDSYD +SK DDHI+RK PK IWYLTVLGSLATTQREYIALHAF
Sbjct: 488 DTRDPVGAILHFYVGDSYDPNSK-VDDHILRKLHPKGIWYLTVLGSLATTQREYIALHAF 546
Query: 208 RRLNSQMQSAILQPSPEHFPKCEEQPPSMPDCFTPNFVDYLHRTFNSPQLAAIQWAAMHT 29
RRLN QMQ+AIL PSPEHFPK EEQPP+MP+CFTPNFV+YLH+TFN PQLAAIQWAAMHT
Sbjct: 547 RRLNLQMQTAILHPSPEHFPKYEEQPPAMPECFTPNFVEYLHKTFNGPQLAAIQWAAMHT 606
Query: 28 AAGTNNGST 2
AAGT++G T
Sbjct: 607 AAGTSSGVT 615
Score = 114 bits (284), Expect(3) = 1e-99
Identities = 51/56 (91%), Positives = 53/56 (94%)
Frame = -1
Query: 839 NEKFWHQAEETELQCVPGQFESVEEYVRVFEPLLFEECRAQLYSTWEEFTETVSRD 672
NEKFWH EETELQCVPG+FESVEEY+RVFEPLLFEECRAQLYSTWEE TETVSRD
Sbjct: 352 NEKFWHHPEETELQCVPGRFESVEEYIRVFEPLLFEECRAQLYSTWEELTETVSRD 407
Score = 50.1 bits (118), Expect(3) = 1e-99
Identities = 25/35 (71%), Positives = 27/35 (77%)
Frame = -3
Query: 1041 EHKAGNKKHLPAKKQTADNFQYQDTSVERLLREVT 937
E K NKKH PAK QT + QYQDTSVERL+REVT
Sbjct: 317 ESKLVNKKHPPAKMQTTVSSQYQDTSVERLIREVT 351
Score = 72.8 bits (177), Expect(2) = 4e-22
Identities = 46/102 (45%), Positives = 61/102 (59%), Gaps = 3/102 (2%)
Frame = -1
Query: 1505 IKTSTPRRQSSFPAPMITRTVKDTLRASPAAVERIAEHHNMSSGKDQKQSDTSNTEGGAA 1326
+KTSTPRRQ+ FPAP+ TR VK+ +R+ P ERI E N S KDQKQ D S+ EGG
Sbjct: 187 MKTSTPRRQN-FPAPITTRIVKE-IRSVPPPAERIGEKQNHSMIKDQKQVDLSSNEGGGG 244
Query: 1325 --VDSGNHKVDSNGDYSSGSQAWSKKPN-VGDFNMDAHSVSI 1209
V+S K +SN D +SG ++ N D + + H +I
Sbjct: 245 NLVESNEPKSESNNDMNSGLLGRPRRLNSANDISAEVHPPTI 286
Score = 60.1 bits (144), Expect(2) = 4e-22
Identities = 26/40 (65%), Positives = 34/40 (85%)
Frame = -3
Query: 1695 RVGSNLGRRPKLDEHKEAMLGKKRARQTMFINVEDAKQAG 1576
+ +N G++ KLD+HKEAMLGKKR RQT+F+N+ED KQAG
Sbjct: 146 KCANNPGKKHKLDQHKEAMLGKKRTRQTVFLNLEDVKQAG 185
>ref|XP_002284214.1| PREDICTED: uncharacterized ATP-dependent helicase C29A10.10c-like
[Vitis vinifera]
Length = 1375
Score = 242 bits (617), Expect(3) = 2e-97
Identities = 122/189 (64%), Positives = 133/189 (70%)
Frame = -2
Query: 568 PVQECKWNFKEGDXXXXXXXXXXXXXXSNKRNIHAGASEEDXXXXXXXXXXXXXXRHIPT 389
P ECKW FKEGD +D RH P
Sbjct: 535 PANECKWTFKEGDVAILSAPR---------------PGSDDEEAEISGRVAGTVRRHNPI 579
Query: 388 DTRDPLGAILHFYVGDSYDCSSKGADDHIVRKFQPKSIWYLTVLGSLATTQREYIALHAF 209
DTRDP+GAILHFYVGDSYD +SK DDHI+RK PK IWYLTVLGSLATTQREYIALHAF
Sbjct: 580 DTRDPVGAILHFYVGDSYDPNSK-VDDHILRKLHPKGIWYLTVLGSLATTQREYIALHAF 638
Query: 208 RRLNSQMQSAILQPSPEHFPKCEEQPPSMPDCFTPNFVDYLHRTFNSPQLAAIQWAAMHT 29
RRLN QMQ+AIL PSPEHFPK EEQPP+MP+CFTPNFV+YLH+TFN PQLAAIQWAAMHT
Sbjct: 639 RRLNLQMQTAILHPSPEHFPKYEEQPPAMPECFTPNFVEYLHKTFNGPQLAAIQWAAMHT 698
Query: 28 AAGTNNGST 2
AAGT++G T
Sbjct: 699 AAGTSSGVT 707
Score = 114 bits (284), Expect(3) = 2e-97
Identities = 51/56 (91%), Positives = 53/56 (94%)
Frame = -1
Query: 839 NEKFWHQAEETELQCVPGQFESVEEYVRVFEPLLFEECRAQLYSTWEEFTETVSRD 672
NEKFWH EETELQCVPG+FESVEEY+RVFEPLLFEECRAQLYSTWEE TETVSRD
Sbjct: 456 NEKFWHHPEETELQCVPGRFESVEEYIRVFEPLLFEECRAQLYSTWEELTETVSRD 511
Score = 50.1 bits (118), Expect(3) = 2e-97
Identities = 25/35 (71%), Positives = 27/35 (77%)
Frame = -3
Query: 1041 EHKAGNKKHLPAKKQTADNFQYQDTSVERLLREVT 937
E K NKKH PAK QT + QYQDTSVERL+REVT
Sbjct: 421 ESKLVNKKHPPAKMQTTVSSQYQDTSVERLIREVT 455
Score = 72.8 bits (177), Expect(2) = 4e-22
Identities = 46/102 (45%), Positives = 61/102 (59%), Gaps = 3/102 (2%)
Frame = -1
Query: 1505 IKTSTPRRQSSFPAPMITRTVKDTLRASPAAVERIAEHHNMSSGKDQKQSDTSNTEGGAA 1326
+KTSTPRRQ+ FPAP+ TR VK+ +R+ P ERI E N S KDQKQ D S+ EGG
Sbjct: 291 MKTSTPRRQN-FPAPITTRIVKE-IRSVPPPAERIGEKQNHSMIKDQKQVDLSSNEGGGG 348
Query: 1325 --VDSGNHKVDSNGDYSSGSQAWSKKPN-VGDFNMDAHSVSI 1209
V+S K +SN D +SG ++ N D + + H +I
Sbjct: 349 NLVESNEPKSESNNDMNSGLLGRPRRLNSANDISAEVHPPTI 390
Score = 60.1 bits (144), Expect(2) = 4e-22
Identities = 26/40 (65%), Positives = 34/40 (85%)
Frame = -3
Query: 1695 RVGSNLGRRPKLDEHKEAMLGKKRARQTMFINVEDAKQAG 1576
+ +N G++ KLD+HKEAMLGKKR RQT+F+N+ED KQAG
Sbjct: 250 KCANNPGKKHKLDQHKEAMLGKKRTRQTVFLNLEDVKQAG 289
>emb|CAN65841.1| hypothetical protein VITISV_009619 [Vitis vinifera]
Length = 1408
Score = 249 bits (636), Expect(3) = 1e-95
Identities = 126/189 (66%), Positives = 140/189 (74%)
Frame = -2
Query: 568 PVQECKWNFKEGDXXXXXXXXXXXXXXSNKRNIHAGASEEDXXXXXXXXXXXXXXRHIPT 389
P ECKW FKEGD +KRN + + E+D RH P
Sbjct: 556 PANECKWTFKEGDVAILSAPRPGSVR--SKRN-NTSSIEDDEEAEISGRVAGTVRRHNPI 612
Query: 388 DTRDPLGAILHFYVGDSYDCSSKGADDHIVRKFQPKSIWYLTVLGSLATTQREYIALHAF 209
DTRDP+GAILHFYVGDSYD +SK DDHI+RK PK IWYLTVLGSLATTQREYIALHAF
Sbjct: 613 DTRDPVGAILHFYVGDSYDPNSK-VDDHILRKLHPKGIWYLTVLGSLATTQREYIALHAF 671
Query: 208 RRLNSQMQSAILQPSPEHFPKCEEQPPSMPDCFTPNFVDYLHRTFNSPQLAAIQWAAMHT 29
RRLN QMQ+AIL PSPEHFPK EEQPP+MP+CFTPNFV+YLH+TFN PQLAAIQWAAMHT
Sbjct: 672 RRLNLQMQTAILHPSPEHFPKYEEQPPAMPECFTPNFVEYLHKTFNGPQLAAIQWAAMHT 731
Query: 28 AAGTNNGST 2
AAGT++G T
Sbjct: 732 AAGTSSGVT 740
Score = 100 bits (249), Expect(3) = 1e-95
Identities = 50/77 (64%), Positives = 53/77 (68%), Gaps = 21/77 (27%)
Frame = -1
Query: 839 NEKFWHQAE---------------------ETELQCVPGQFESVEEYVRVFEPLLFEECR 723
NEKFWH + ETELQCVPG+FESVEEY+RVFEPLLFEECR
Sbjct: 456 NEKFWHHPDISRFVLNVAVLSYDISMFLNHETELQCVPGRFESVEEYIRVFEPLLFEECR 515
Query: 722 AQLYSTWEEFTETVSRD 672
AQLYSTWEE TETVSRD
Sbjct: 516 AQLYSTWEELTETVSRD 532
Score = 50.1 bits (118), Expect(3) = 1e-95
Identities = 25/35 (71%), Positives = 27/35 (77%)
Frame = -3
Query: 1041 EHKAGNKKHLPAKKQTADNFQYQDTSVERLLREVT 937
E K NKKH PAK QT + QYQDTSVERL+REVT
Sbjct: 421 ESKLVNKKHPPAKMQTTVSSQYQDTSVERLIREVT 455
Score = 72.8 bits (177), Expect(2) = 4e-22
Identities = 46/102 (45%), Positives = 61/102 (59%), Gaps = 3/102 (2%)
Frame = -1
Query: 1505 IKTSTPRRQSSFPAPMITRTVKDTLRASPAAVERIAEHHNMSSGKDQKQSDTSNTEGGAA 1326
+KTSTPRRQ+ FPAP+ TR VK+ +R+ P ERI E N S KDQKQ D S+ EGG
Sbjct: 291 MKTSTPRRQN-FPAPITTRIVKE-IRSVPPPAERIGEKQNHSMIKDQKQVDLSSNEGGGG 348
Query: 1325 --VDSGNHKVDSNGDYSSGSQAWSKKPN-VGDFNMDAHSVSI 1209
V+S K +SN D +SG ++ N D + + H +I
Sbjct: 349 NLVESNEPKSESNNDMNSGLLGRPRRLNSANDISAEVHPPTI 390
Score = 60.1 bits (144), Expect(2) = 4e-22
Identities = 26/40 (65%), Positives = 34/40 (85%)
Frame = -3
Query: 1695 RVGSNLGRRPKLDEHKEAMLGKKRARQTMFINVEDAKQAG 1576
+ +N G++ KLD+HKEAMLGKKR RQT+F+N+ED KQAG
Sbjct: 250 KCANNPGKKHKLDQHKEAMLGKKRTRQTVFLNLEDVKQAG 289
>ref|XP_003529830.1| PREDICTED: probable helicase senataxin-like [Glycine max]
Length = 1388
Score = 237 bits (605), Expect(3) = 4e-95
Identities = 121/189 (64%), Positives = 137/189 (72%)
Frame = -2
Query: 568 PVQECKWNFKEGDXXXXXXXXXXXXXXSNKRNIHAGASEEDXXXXXXXXXXXXXXRHIPT 389
PV E KW+FKEGD G++++D RHIP
Sbjct: 520 PVHEFKWSFKEGDVAILSSP-------------RPGSAQDDGESEVTGRVVGTVRRHIPI 566
Query: 388 DTRDPLGAILHFYVGDSYDCSSKGADDHIVRKFQPKSIWYLTVLGSLATTQREYIALHAF 209
DTRDP GAILH+YVGDSYD S+ DDHI+RK Q SIWYLTVLGSLATTQREYIALHAF
Sbjct: 567 DTRDPPGAILHYYVGDSYD-PSRVDDDHIIRKLQAGSIWYLTVLGSLATTQREYIALHAF 625
Query: 208 RRLNSQMQSAILQPSPEHFPKCEEQPPSMPDCFTPNFVDYLHRTFNSPQLAAIQWAAMHT 29
RRLN QMQ+AILQPSPEHFPK E+Q P+MP+CFT NFV+YLHRTFN PQLAAIQWAAMHT
Sbjct: 626 RRLNLQMQTAILQPSPEHFPKYEQQTPAMPECFTQNFVEYLHRTFNEPQLAAIQWAAMHT 685
Query: 28 AAGTNNGST 2
AAGT++G+T
Sbjct: 686 AAGTSSGTT 694
Score = 111 bits (278), Expect(3) = 4e-95
Identities = 51/56 (91%), Positives = 53/56 (94%)
Frame = -1
Query: 839 NEKFWHQAEETELQCVPGQFESVEEYVRVFEPLLFEECRAQLYSTWEEFTETVSRD 672
+EKFWH EETELQCVPG+FESVEEYVRVFEPLLFEECRAQLYSTWEE TETVSRD
Sbjct: 441 SEKFWHHPEETELQCVPGRFESVEEYVRVFEPLLFEECRAQLYSTWEESTETVSRD 496
Score = 49.3 bits (116), Expect(3) = 4e-95
Identities = 26/40 (65%), Positives = 29/40 (72%)
Frame = -3
Query: 1056 GQSIVEHKAGNKKHLPAKKQTADNFQYQDTSVERLLREVT 937
GQS + K GNKKHL KKQ + Q QDTSVERL+REVT
Sbjct: 401 GQSSNDVKLGNKKHLSIKKQAPVSSQPQDTSVERLIREVT 440
Score = 54.7 bits (130), Expect(2) = 8e-14
Identities = 38/86 (44%), Positives = 54/86 (62%)
Frame = -1
Query: 1505 IKTSTPRRQSSFPAPMITRTVKDTLRASPAAVERIAEHHNMSSGKDQKQSDTSNTEGGAA 1326
IKTSTPRRQ+ F +P+I+R +K+ +R PA VER+ KDQ+ +DTS+ EGG
Sbjct: 282 IKTSTPRRQT-FSSPVISR-IKE-VRTVPAQVERVG------IAKDQRLTDTSSGEGGNY 332
Query: 1325 VDSGNHKVDSNGDYSSGSQAWSKKPN 1248
++ K D NGD +SG S++ N
Sbjct: 333 AEAQEPKSDCNGD-TSGPPVRSRRLN 357
Score = 50.1 bits (118), Expect(2) = 8e-14
Identities = 22/30 (73%), Positives = 26/30 (86%)
Frame = -3
Query: 1665 KLDEHKEAMLGKKRARQTMFINVEDAKQAG 1576
K+D+ KE MLGKKR RQTMF+N+ED KQAG
Sbjct: 251 KIDQRKEEMLGKKRNRQTMFLNLEDVKQAG 280
>ref|XP_003547681.1| PREDICTED: uncharacterized ATP-dependent helicase C29A10.10c-like
[Glycine max]
Length = 1328
Score = 234 bits (597), Expect(3) = 2e-93
Identities = 120/189 (63%), Positives = 136/189 (71%)
Frame = -2
Query: 568 PVQECKWNFKEGDXXXXXXXXXXXXXXSNKRNIHAGASEEDXXXXXXXXXXXXXXRHIPT 389
PV E KW+FKEGD G++++D RHIP
Sbjct: 486 PVHEFKWSFKEGDVAILSSP-------------RPGSAQDDGESEVTGRVVGTVRRHIPI 532
Query: 388 DTRDPLGAILHFYVGDSYDCSSKGADDHIVRKFQPKSIWYLTVLGSLATTQREYIALHAF 209
DTRDP GAILH+YVGDSYD S+ DDHI+RK Q SIWYLTVLGSLATTQREYIALHAF
Sbjct: 533 DTRDPPGAILHYYVGDSYD-PSRVDDDHIIRKLQAGSIWYLTVLGSLATTQREYIALHAF 591
Query: 208 RRLNSQMQSAILQPSPEHFPKCEEQPPSMPDCFTPNFVDYLHRTFNSPQLAAIQWAAMHT 29
RRLN QMQ+AILQPSPEHFPK E+Q P+MP+CFT NFV+YL RTFN PQLAAIQWAAMHT
Sbjct: 592 RRLNLQMQTAILQPSPEHFPKYEQQTPAMPECFTQNFVEYLRRTFNEPQLAAIQWAAMHT 651
Query: 28 AAGTNNGST 2
AAGT++G+T
Sbjct: 652 AAGTSSGTT 660
Score = 110 bits (274), Expect(3) = 2e-93
Identities = 50/56 (89%), Positives = 52/56 (92%)
Frame = -1
Query: 839 NEKFWHQAEETELQCVPGQFESVEEYVRVFEPLLFEECRAQLYSTWEEFTETVSRD 672
+EKFWH EETELQCVPG+FESVEEY RVFEPLLFEECRAQLYSTWEE TETVSRD
Sbjct: 407 SEKFWHHPEETELQCVPGRFESVEEYARVFEPLLFEECRAQLYSTWEESTETVSRD 462
Score = 48.1 bits (113), Expect(3) = 2e-93
Identities = 26/40 (65%), Positives = 29/40 (72%)
Frame = -3
Query: 1056 GQSIVEHKAGNKKHLPAKKQTADNFQYQDTSVERLLREVT 937
GQS + K NKKHL KKQT + Q QDTSVERL+REVT
Sbjct: 367 GQSSNDVKLVNKKHLSIKKQTPISSQSQDTSVERLIREVT 406
Score = 62.8 bits (151), Expect(2) = 7e-17
Identities = 40/86 (46%), Positives = 55/86 (63%)
Frame = -1
Query: 1505 IKTSTPRRQSSFPAPMITRTVKDTLRASPAAVERIAEHHNMSSGKDQKQSDTSNTEGGAA 1326
IKTSTPRRQ+ F +P+I+RT+K+ +R PA VER+ KDQK +DTS+ EGG
Sbjct: 248 IKTSTPRRQT-FSSPVISRTIKE-VRTVPAQVERVG------IAKDQKLTDTSSAEGGNH 299
Query: 1325 VDSGNHKVDSNGDYSSGSQAWSKKPN 1248
++ K D NGD +SG S++ N
Sbjct: 300 AEAQEPKSDCNGD-TSGPLVRSRRLN 324
Score = 52.4 bits (124), Expect(2) = 7e-17
Identities = 25/40 (62%), Positives = 32/40 (80%)
Frame = -3
Query: 1695 RVGSNLGRRPKLDEHKEAMLGKKRARQTMFINVEDAKQAG 1576
R +N G+R ++D+ KE MLGKKR RQTMF+N+ED KQAG
Sbjct: 208 RCANNPGKR-RIDQRKEEMLGKKRNRQTMFLNLEDVKQAG 246