BLASTX nr result
ID: Dioscorea21_contig00008231
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00008231 (570 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003954775.1| general secretion system protein E [Stigmate... 62 5e-08 gb|EJT47178.1| hypothetical protein A1Q1_04036 [Trichosporon asa... 55 8e-06 >ref|YP_003954775.1| general secretion system protein E [Stigmatella aurantiaca DW4/3-1] gi|309395489|gb|ADO72948.1| General secretory system II [Stigmatella aurantiaca DW4/3-1] Length = 1177 Score = 62.4 bits (150), Expect = 5e-08 Identities = 58/185 (31%), Positives = 74/185 (40%), Gaps = 13/185 (7%) Frame = +1 Query: 4 GKRPASVIPISRAPRGKRASLVTPISQAPPTVVPQVERALTVEPITWXXXXXXXXXXXXX 183 G RP V P+ + P + A + + PP P A V P+ Sbjct: 632 GARPP-VAPVRQEPPSRAA--IPTVGAQPPVAAPPTPPAPPVAPVR--------QEPPSR 680 Query: 184 SMTPTYSAPRPSVAQ-------RKRKRKLPGTPTFYVAPPAIA----LERCARRPVSRAR 330 + PT A P+VA R+ PT PPA+A + + P SRA Sbjct: 681 AAIPTVGAQPPAVALAPPVTPVRQEPPSRAAIPTVGAQPPAVAPAPPVTPVRQEPPSRAA 740 Query: 331 PLTVGRGRGL--RAPPVTPISGERPPAVAQEEHAPLVTPIPGARPPAVAQEEHAPPVTSI 504 TVG APPVTP+ E P VA P GA+PPAV+ APPV S+ Sbjct: 741 IPTVGAQPPAVALAPPVTPVRQEPPSRVA--------IPTVGAQPPAVSPARPAPPVPSV 792 Query: 505 PSARP 519 PS P Sbjct: 793 PSGPP 797 >gb|EJT47178.1| hypothetical protein A1Q1_04036 [Trichosporon asahii var. asahii CBS 2479] Length = 1522 Score = 55.1 bits (131), Expect = 8e-06 Identities = 41/117 (35%), Positives = 49/117 (41%), Gaps = 10/117 (8%) Frame = +1 Query: 208 PRPSVAQRKRKRKLPGTPTFY---VAPPAIALERCARRPVSRARPLTVGRGR-----GLR 363 PRP + PG V PPA + R P++ ARP G G+R Sbjct: 323 PRPGAPGARPAPARPGAAAAQPAGVRPPAPGV----RPPIAGARPPVAGAAAARPPAGVR 378 Query: 364 APPVTPISGERPPAVAQEEHAPLVTPIPGARPPAVAQEEHA--PPVTSIPSARPLTV 528 P +G RP A A P+ PGARPPA A A PP T+ PS RP V Sbjct: 379 PPATAAAAGIRPAAAATPAARPMTADAPGARPPAAAAGVPARPPPATAAPSVRPAGV 435