BLASTX nr result

ID: Dioscorea21_contig00008231 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00008231
         (570 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003954775.1| general secretion system protein E [Stigmate...    62   5e-08
gb|EJT47178.1| hypothetical protein A1Q1_04036 [Trichosporon asa...    55   8e-06

>ref|YP_003954775.1| general secretion system protein E [Stigmatella aurantiaca DW4/3-1]
            gi|309395489|gb|ADO72948.1| General secretory system II
            [Stigmatella aurantiaca DW4/3-1]
          Length = 1177

 Score = 62.4 bits (150), Expect = 5e-08
 Identities = 58/185 (31%), Positives = 74/185 (40%), Gaps = 13/185 (7%)
 Frame = +1

Query: 4    GKRPASVIPISRAPRGKRASLVTPISQAPPTVVPQVERALTVEPITWXXXXXXXXXXXXX 183
            G RP  V P+ + P  + A  +  +   PP   P    A  V P+               
Sbjct: 632  GARPP-VAPVRQEPPSRAA--IPTVGAQPPVAAPPTPPAPPVAPVR--------QEPPSR 680

Query: 184  SMTPTYSAPRPSVAQ-------RKRKRKLPGTPTFYVAPPAIA----LERCARRPVSRAR 330
            +  PT  A  P+VA        R+        PT    PPA+A    +    + P SRA 
Sbjct: 681  AAIPTVGAQPPAVALAPPVTPVRQEPPSRAAIPTVGAQPPAVAPAPPVTPVRQEPPSRAA 740

Query: 331  PLTVGRGRGL--RAPPVTPISGERPPAVAQEEHAPLVTPIPGARPPAVAQEEHAPPVTSI 504
              TVG        APPVTP+  E P  VA         P  GA+PPAV+    APPV S+
Sbjct: 741  IPTVGAQPPAVALAPPVTPVRQEPPSRVA--------IPTVGAQPPAVSPARPAPPVPSV 792

Query: 505  PSARP 519
            PS  P
Sbjct: 793  PSGPP 797


>gb|EJT47178.1| hypothetical protein A1Q1_04036 [Trichosporon asahii var. asahii
           CBS 2479]
          Length = 1522

 Score = 55.1 bits (131), Expect = 8e-06
 Identities = 41/117 (35%), Positives = 49/117 (41%), Gaps = 10/117 (8%)
 Frame = +1

Query: 208 PRPSVAQRKRKRKLPGTPTFY---VAPPAIALERCARRPVSRARPLTVGRGR-----GLR 363
           PRP     +     PG        V PPA  +    R P++ ARP   G        G+R
Sbjct: 323 PRPGAPGARPAPARPGAAAAQPAGVRPPAPGV----RPPIAGARPPVAGAAAARPPAGVR 378

Query: 364 APPVTPISGERPPAVAQEEHAPLVTPIPGARPPAVAQEEHA--PPVTSIPSARPLTV 528
            P     +G RP A A     P+    PGARPPA A    A  PP T+ PS RP  V
Sbjct: 379 PPATAAAAGIRPAAAATPAARPMTADAPGARPPAAAAGVPARPPPATAAPSVRPAGV 435


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