BLASTX nr result

ID: Dioscorea21_contig00008229 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00008229
         (1091 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A2XA73.1|GRF1_ORYSI RecName: Full=Growth-regulating factor 1;...   225   1e-56
gb|EAZ24805.1| hypothetical protein OsJ_08584 [Oryza sativa Japo...   225   1e-56
ref|NP_001048288.1| Os02g0776900 [Oryza sativa Japonica Group] g...   225   1e-56
ref|XP_003570521.1| PREDICTED: uncharacterized protein LOC100845...   224   4e-56
dbj|BAJ87627.1| predicted protein [Hordeum vulgare subsp. vulgare]    223   8e-56

>sp|A2XA73.1|GRF1_ORYSI RecName: Full=Growth-regulating factor 1; Short=OsGRF1; AltName:
           Full=Transcription activator GRF1
           gi|6573149|gb|AAF17567.1|AF201895_1 growth-regulating
           factor 1 [Oryza sativa] gi|125541338|gb|EAY87733.1|
           hypothetical protein OsI_09149 [Oryza sativa Indica
           Group]
          Length = 396

 Score =  225 bits (574), Expect = 1e-56
 Identities = 102/122 (83%), Positives = 113/122 (92%)
 Frame = -2

Query: 733 YPFTATQWQELEHQALIFKYMASGIPIPSDLILPIRRSFLLDPSPCTTPSLAFPHQLPMG 554
           YPFTA+QWQELEHQALI+KYMASG PIPSDLILP+RRSFLLD +  T+PSLAFP Q  +G
Sbjct: 17  YPFTASQWQELEHQALIYKYMASGTPIPSDLILPLRRSFLLDSALATSPSLAFPPQPSLG 76

Query: 553 WGSYQLGYGRKAEDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEMSL 374
           WG + +G+GRKAEDPEPGRCRRTDGKKWRCSKEAYPDSKYCE+HMHRGKNRSRKPVEMSL
Sbjct: 77  WGCFGMGFGRKAEDPEPGRCRRTDGKKWRCSKEAYPDSKYCEKHMHRGKNRSRKPVEMSL 136

Query: 373 AS 368
           A+
Sbjct: 137 AT 138


>gb|EAZ24805.1| hypothetical protein OsJ_08584 [Oryza sativa Japonica Group]
          Length = 360

 Score =  225 bits (574), Expect = 1e-56
 Identities = 102/122 (83%), Positives = 113/122 (92%)
 Frame = -2

Query: 733 YPFTATQWQELEHQALIFKYMASGIPIPSDLILPIRRSFLLDPSPCTTPSLAFPHQLPMG 554
           YPFTA+QWQELEHQALI+KYMASG PIPSDLILP+RRSFLLD +  T+PSLAFP Q  +G
Sbjct: 17  YPFTASQWQELEHQALIYKYMASGTPIPSDLILPLRRSFLLDSALATSPSLAFPPQPSLG 76

Query: 553 WGSYQLGYGRKAEDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEMSL 374
           WG + +G+GRKAEDPEPGRCRRTDGKKWRCSKEAYPDSKYCE+HMHRGKNRSRKPVEMSL
Sbjct: 77  WGCFGMGFGRKAEDPEPGRCRRTDGKKWRCSKEAYPDSKYCEKHMHRGKNRSRKPVEMSL 136

Query: 373 AS 368
           A+
Sbjct: 137 AT 138


>ref|NP_001048288.1| Os02g0776900 [Oryza sativa Japonica Group]
           gi|75120360|sp|Q6AWY8.1|GRF1_ORYSJ RecName:
           Full=Growth-regulating factor 1; Short=OsGRF1; AltName:
           Full=Transcription activator GRF1
           gi|51039831|tpg|DAA05205.1| TPA_exp: growth-regulating
           factor 1 [Oryza sativa (japonica cultivar-group)]
           gi|113537819|dbj|BAF10202.1| Os02g0776900 [Oryza sativa
           Japonica Group]
          Length = 397

 Score =  225 bits (574), Expect = 1e-56
 Identities = 102/122 (83%), Positives = 113/122 (92%)
 Frame = -2

Query: 733 YPFTATQWQELEHQALIFKYMASGIPIPSDLILPIRRSFLLDPSPCTTPSLAFPHQLPMG 554
           YPFTA+QWQELEHQALI+KYMASG PIPSDLILP+RRSFLLD +  T+PSLAFP Q  +G
Sbjct: 17  YPFTASQWQELEHQALIYKYMASGTPIPSDLILPLRRSFLLDSALATSPSLAFPPQPSLG 76

Query: 553 WGSYQLGYGRKAEDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEMSL 374
           WG + +G+GRKAEDPEPGRCRRTDGKKWRCSKEAYPDSKYCE+HMHRGKNRSRKPVEMSL
Sbjct: 77  WGCFGMGFGRKAEDPEPGRCRRTDGKKWRCSKEAYPDSKYCEKHMHRGKNRSRKPVEMSL 136

Query: 373 AS 368
           A+
Sbjct: 137 AT 138


>ref|XP_003570521.1| PREDICTED: uncharacterized protein LOC100845697 [Brachypodium
           distachyon]
          Length = 418

 Score =  224 bits (570), Expect = 4e-56
 Identities = 100/121 (82%), Positives = 112/121 (92%)
 Frame = -2

Query: 730 PFTATQWQELEHQALIFKYMASGIPIPSDLILPIRRSFLLDPSPCTTPSLAFPHQLPMGW 551
           PFTATQWQELEHQALI+KYMASG+PIPSDL+LP+RRSFL DP+  T+PSLAF  Q  +GW
Sbjct: 20  PFTATQWQELEHQALIYKYMASGVPIPSDLLLPLRRSFLFDPALATSPSLAFSPQSSLGW 79

Query: 550 GSYQLGYGRKAEDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEMSLA 371
           G + +G+GRKAEDPEPGRCRRTDGKKWRCSKEAYPDSKYCE+HMHRGKNRSRKPVEMSLA
Sbjct: 80  GCFGMGFGRKAEDPEPGRCRRTDGKKWRCSKEAYPDSKYCEKHMHRGKNRSRKPVEMSLA 139

Query: 370 S 368
           +
Sbjct: 140 T 140


>dbj|BAJ87627.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 413

 Score =  223 bits (567), Expect = 8e-56
 Identities = 99/121 (81%), Positives = 112/121 (92%)
 Frame = -2

Query: 730 PFTATQWQELEHQALIFKYMASGIPIPSDLILPIRRSFLLDPSPCTTPSLAFPHQLPMGW 551
           PFTATQWQELEHQALI+KYMASG+PIPSDL+LP+RRSFLLD +  T+PSLAFP Q  +GW
Sbjct: 21  PFTATQWQELEHQALIYKYMASGVPIPSDLLLPLRRSFLLDSALATSPSLAFPPQATLGW 80

Query: 550 GSYQLGYGRKAEDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEMSLA 371
           G + +G+GRK EDPEPGRCRRTDGKKWRCS+EAYPDSKYCE+HMHRGKNRSRKPVEMSLA
Sbjct: 81  GCFGMGFGRKPEDPEPGRCRRTDGKKWRCSREAYPDSKYCEKHMHRGKNRSRKPVEMSLA 140

Query: 370 S 368
           +
Sbjct: 141 T 141


Top