BLASTX nr result

ID: Dioscorea21_contig00008224 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00008224
         (424 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD33184.1| RNA-binding protein-like [Oryza sativa Japonica ...   157   7e-37
gb|EEC84303.1| hypothetical protein OsI_30792 [Oryza sativa Indi...   157   7e-37
gb|EEC81887.1| hypothetical protein OsI_25698 [Oryza sativa Indi...   157   9e-37
dbj|BAD32064.1| RRM-containing RNA-binding protein-like [Oryza s...   156   1e-36
ref|NP_001059411.1| Os07g0296200 [Oryza sativa Japonica Group] g...   156   1e-36

>dbj|BAD33184.1| RNA-binding protein-like [Oryza sativa Japonica Group]
           gi|222641273|gb|EEE69405.1| hypothetical protein
           OsJ_28765 [Oryza sativa Japonica Group]
          Length = 414

 Score =  157 bits (398), Expect = 7e-37
 Identities = 80/140 (57%), Positives = 85/140 (60%)
 Frame = +3

Query: 3   KDKRTGRPKIWLYRDKATNEPKGDATITYEDPHAASAAVEWFHQKDFHGSIIEVYIAEQK 182
           KDKRTGRPKIW+YRDK TNEPKGDAT+TYEDPHAASAAVEWF+ KDFHGS I+V+IAE K
Sbjct: 40  KDKRTGRPKIWIYRDKVTNEPKGDATVTYEDPHAASAAVEWFNNKDFHGSTIQVHIAESK 99

Query: 183 TKDPVDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAWQQDGDWLCPNT 362
            KD  D                                        KAWQQDGDWLCPNT
Sbjct: 100 NKDTYDN--------SASLNNSAGLGGQDELDNGAGRGRGHGDGPGKAWQQDGDWLCPNT 151

Query: 363 RSVL*YCCSNVNFAFRGVCN 422
                  C NVNFAFRGVCN
Sbjct: 152 ------SCGNVNFAFRGVCN 165


>gb|EEC84303.1| hypothetical protein OsI_30792 [Oryza sativa Indica Group]
          Length = 471

 Score =  157 bits (398), Expect = 7e-37
 Identities = 80/140 (57%), Positives = 85/140 (60%)
 Frame = +3

Query: 3   KDKRTGRPKIWLYRDKATNEPKGDATITYEDPHAASAAVEWFHQKDFHGSIIEVYIAEQK 182
           KDKRTGRPKIW+YRDK TNEPKGDAT+TYEDPHAASAAVEWF+ KDFHGS I+V+IAE K
Sbjct: 97  KDKRTGRPKIWIYRDKVTNEPKGDATVTYEDPHAASAAVEWFNNKDFHGSTIQVHIAESK 156

Query: 183 TKDPVDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAWQQDGDWLCPNT 362
            KD  D                                        KAWQQDGDWLCPNT
Sbjct: 157 NKDTYDN--------SASLNNSAGLGGQDELDNGAGRGRGHGDGPGKAWQQDGDWLCPNT 208

Query: 363 RSVL*YCCSNVNFAFRGVCN 422
                  C NVNFAFRGVCN
Sbjct: 209 ------SCGNVNFAFRGVCN 222


>gb|EEC81887.1| hypothetical protein OsI_25698 [Oryza sativa Indica Group]
          Length = 433

 Score =  157 bits (397), Expect = 9e-37
 Identities = 80/140 (57%), Positives = 85/140 (60%)
 Frame = +3

Query: 3   KDKRTGRPKIWLYRDKATNEPKGDATITYEDPHAASAAVEWFHQKDFHGSIIEVYIAEQK 182
           KDKRTGRPKIW+YRDK TNEPKGDAT+TYEDPHAASAAVEWF+ KDFHGS I+V+IAE K
Sbjct: 40  KDKRTGRPKIWIYRDKVTNEPKGDATVTYEDPHAASAAVEWFNNKDFHGSTIQVHIAESK 99

Query: 183 TKDPVDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAWQQDGDWLCPNT 362
            KD  D                                        KAWQQDGDWLCPNT
Sbjct: 100 NKDMYDS------SATASLNNSAELGGQDELDNGEGRGRGRGDGPGKAWQQDGDWLCPNT 153

Query: 363 RSVL*YCCSNVNFAFRGVCN 422
                  C NVNFAFRGVCN
Sbjct: 154 ------SCGNVNFAFRGVCN 167


>dbj|BAD32064.1| RRM-containing RNA-binding protein-like [Oryza sativa Japonica
           Group] gi|215736994|dbj|BAG95923.1| unnamed protein
           product [Oryza sativa Japonica Group]
          Length = 360

 Score =  156 bits (395), Expect = 1e-36
 Identities = 80/140 (57%), Positives = 85/140 (60%)
 Frame = +3

Query: 3   KDKRTGRPKIWLYRDKATNEPKGDATITYEDPHAASAAVEWFHQKDFHGSIIEVYIAEQK 182
           KDKRTGRPKIW+YRDK TNEPKGDAT+TYEDPHAASAAVEWF+ KDFHGS I+V+IAE K
Sbjct: 6   KDKRTGRPKIWIYRDKVTNEPKGDATVTYEDPHAASAAVEWFNNKDFHGSTIQVHIAESK 65

Query: 183 TKDPVDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAWQQDGDWLCPNT 362
            KD  D                                        KAWQQDGDWLCPNT
Sbjct: 66  NKDMNDS------SATASLNNSAELGGQDELDNGEGRGRGRGDGPGKAWQQDGDWLCPNT 119

Query: 363 RSVL*YCCSNVNFAFRGVCN 422
                  C NVNFAFRGVCN
Sbjct: 120 ------SCGNVNFAFRGVCN 133


>ref|NP_001059411.1| Os07g0296200 [Oryza sativa Japonica Group]
           gi|34394336|dbj|BAC84891.1| RRM-containing RNA-binding
           protein-like [Oryza sativa Japonica Group]
           gi|113610947|dbj|BAF21325.1| Os07g0296200 [Oryza sativa
           Japonica Group] gi|215693885|dbj|BAG89084.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|222636864|gb|EEE66996.1| hypothetical protein
           OsJ_23906 [Oryza sativa Japonica Group]
          Length = 394

 Score =  156 bits (395), Expect = 1e-36
 Identities = 80/140 (57%), Positives = 85/140 (60%)
 Frame = +3

Query: 3   KDKRTGRPKIWLYRDKATNEPKGDATITYEDPHAASAAVEWFHQKDFHGSIIEVYIAEQK 182
           KDKRTGRPKIW+YRDK TNEPKGDAT+TYEDPHAASAAVEWF+ KDFHGS I+V+IAE K
Sbjct: 40  KDKRTGRPKIWIYRDKVTNEPKGDATVTYEDPHAASAAVEWFNNKDFHGSTIQVHIAESK 99

Query: 183 TKDPVDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAWQQDGDWLCPNT 362
            KD  D                                        KAWQQDGDWLCPNT
Sbjct: 100 NKDMNDS------SATASLNNSAELGGQDELDNGEGRGRGRGDGPGKAWQQDGDWLCPNT 153

Query: 363 RSVL*YCCSNVNFAFRGVCN 422
                  C NVNFAFRGVCN
Sbjct: 154 ------SCGNVNFAFRGVCN 167


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