BLASTX nr result

ID: Dioscorea21_contig00008209 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00008209
         (243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285816.1| PREDICTED: F-box/kelch-repeat protein At1g22...   124   8e-27
ref|XP_002302274.1| predicted protein [Populus trichocarpa] gi|2...   120   1e-25
ref|XP_002306596.1| f-box family protein [Populus trichocarpa] g...   118   4e-25
ref|XP_002271882.1| PREDICTED: F-box/kelch-repeat protein At1g22...   117   1e-24
emb|CAN63480.1| hypothetical protein VITISV_011508 [Vitis vinifera]   117   1e-24

>ref|XP_002285816.1| PREDICTED: F-box/kelch-repeat protein At1g22040 [Vitis vinifera]
          Length = 477

 Score =  124 bits (311), Expect = 8e-27
 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 1/81 (1%)
 Frame = +2

Query: 2   LRKELGTTEEWLYVLTKTE-DKLVWHAFEPRSGKWQKLPPMPNVVHEEEPKRGLSGFWMW 178
           LRKELG TEEWLY+LTK E D+L+WHA +P S +WQ+LP MPNVV+EEE ++  SG WMW
Sbjct: 85  LRKELGKTEEWLYILTKVEEDRLLWHALDPLSRRWQRLPSMPNVVYEEESRKVSSGLWMW 144

Query: 179 NIIGSSLKIGDVIRSWLGRRD 241
           N++G S+KI DVIR WLGR+D
Sbjct: 145 NMVGPSIKIADVIRGWLGRKD 165


>ref|XP_002302274.1| predicted protein [Populus trichocarpa] gi|222844000|gb|EEE81547.1|
           predicted protein [Populus trichocarpa]
          Length = 398

 Score =  120 bits (301), Expect = 1e-25
 Identities = 52/81 (64%), Positives = 65/81 (80%), Gaps = 1/81 (1%)
 Frame = +2

Query: 2   LRKELGTTEEWLYVLTKTE-DKLVWHAFEPRSGKWQKLPPMPNVVHEEEPKRGLSGFWMW 178
           +RK+ G TEEWLYVL K + DKL WHA +P S  WQ+LPPMPNVV  +E KRGLSGFW+W
Sbjct: 10  VRKDFGLTEEWLYVLIKDKADKLSWHALDPLSRNWQRLPPMPNVVCTDESKRGLSGFWLW 69

Query: 179 NIIGSSLKIGDVIRSWLGRRD 241
           N++G  +KI +VIRSWLG++D
Sbjct: 70  NVVGPGIKIAEVIRSWLGQKD 90


>ref|XP_002306596.1| f-box family protein [Populus trichocarpa]
           gi|222856045|gb|EEE93592.1| f-box family protein
           [Populus trichocarpa]
          Length = 474

 Score =  118 bits (296), Expect = 4e-25
 Identities = 51/81 (62%), Positives = 63/81 (77%), Gaps = 1/81 (1%)
 Frame = +2

Query: 2   LRKELGTTEEWLYVLTKTE-DKLVWHAFEPRSGKWQKLPPMPNVVHEEEPKRGLSGFWMW 178
           +RKELG TEEWLYVL K E DKL WHA +P S  WQ+LPPMPNVV  +E K G SG W+W
Sbjct: 86  VRKELGLTEEWLYVLIKDEADKLSWHALDPLSRNWQRLPPMPNVVCADESKSGFSGLWLW 145

Query: 179 NIIGSSLKIGDVIRSWLGRRD 241
           N++GS +KI + +RSWLG++D
Sbjct: 146 NVVGSGIKIAEAVRSWLGQKD 166


>ref|XP_002271882.1| PREDICTED: F-box/kelch-repeat protein At1g22040-like [Vitis
           vinifera]
          Length = 479

 Score =  117 bits (292), Expect = 1e-24
 Identities = 53/81 (65%), Positives = 66/81 (81%), Gaps = 1/81 (1%)
 Frame = +2

Query: 2   LRKELGTTEEWLYVLTKT-EDKLVWHAFEPRSGKWQKLPPMPNVVHEEEPKRGLSGFWMW 178
           LRKELGTTEEWLY+LTK  +DKL+W++ +P S +WQ+LPPMPNV HE+  ++G SG  M 
Sbjct: 87  LRKELGTTEEWLYILTKIKDDKLLWYSLDPLSRRWQRLPPMPNVAHEDGYRKGFSGLRML 146

Query: 179 NIIGSSLKIGDVIRSWLGRRD 241
           N++GSS KI DVIR WLGRRD
Sbjct: 147 NMVGSSNKIADVIRGWLGRRD 167


>emb|CAN63480.1| hypothetical protein VITISV_011508 [Vitis vinifera]
          Length = 499

 Score =  117 bits (292), Expect = 1e-24
 Identities = 53/81 (65%), Positives = 66/81 (81%), Gaps = 1/81 (1%)
 Frame = +2

Query: 2   LRKELGTTEEWLYVLTKT-EDKLVWHAFEPRSGKWQKLPPMPNVVHEEEPKRGLSGFWMW 178
           LRKELGTTEEWLY+LTK  +DKL+W++ +P S +WQ+LPPMPNV HE+  ++G SG  M 
Sbjct: 87  LRKELGTTEEWLYILTKIKDDKLLWYSLDPLSRRWQRLPPMPNVAHEDGYRKGFSGLRML 146

Query: 179 NIIGSSLKIGDVIRSWLGRRD 241
           N++GSS KI DVIR WLGRRD
Sbjct: 147 NMVGSSNKIADVIRGWLGRRD 167


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