BLASTX nr result

ID: Dioscorea21_contig00008178 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00008178
         (553 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK22660.1| unknown [Picea sitchensis]                              80   2e-13
ref|NP_001152218.1| HIT zinc finger family protein [Zea mays] gi...    74   1e-11
ref|XP_001785765.1| predicted protein [Physcomitrella patens sub...    72   6e-11
ref|NP_194611.2| HIT-type zinc finger protein [Arabidopsis thali...    72   8e-11
ref|NP_001031741.1| HIT-type zinc finger protein [Arabidopsis th...    72   8e-11

>gb|ABK22660.1| unknown [Picea sitchensis]
          Length = 159

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 39/79 (49%), Positives = 59/79 (74%)
 Frame = -2

Query: 540 PERLYQVEESSCVLGKEQLESIVESKEIRDSLQNRELQNLIKSISSSKNPEDELDEAMKG 361
           P    + +E    L + QLE++V S EIR+ L+++ELQ +I  I SS+N E+ELD+AM+G
Sbjct: 75  PRSFEEEDEQGWRLHRTQLEAVVASSEIRNILKDQELQKIILRIDSSENAEEELDKAMEG 134

Query: 360 QNFRDFTEKILSIVSPQEQ 304
            +F++FT+KILSI+SP+EQ
Sbjct: 135 PHFQEFTDKILSIISPEEQ 153


>ref|NP_001152218.1| HIT zinc finger family protein [Zea mays]
           gi|195653953|gb|ACG46444.1| HIT zinc finger family
           protein [Zea mays]
          Length = 169

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 36/78 (46%), Positives = 53/78 (67%)
 Frame = -2

Query: 540 PERLYQVEESSCVLGKEQLESIVESKEIRDSLQNRELQNLIKSISSSKNPEDELDEAMKG 361
           P +  +VE+ S ++   +L S+ E K I D+L++ ELQ +I  I  S  PE EL++ M+G
Sbjct: 92  PTKALEVEDLSWLVDNNRLRSLAELKGIHDALRDPELQRMILQIDGSSEPEKELEKVMEG 151

Query: 360 QNFRDFTEKILSIVSPQE 307
           Q FR+FT+KIL IV+PQE
Sbjct: 152 QAFREFTDKILDIVNPQE 169


>ref|XP_001785765.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162662595|gb|EDQ49429.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 141

 Score = 72.0 bits (175), Expect = 6e-11
 Identities = 34/69 (49%), Positives = 53/69 (76%)
 Frame = -2

Query: 519 EESSCVLGKEQLESIVESKEIRDSLQNRELQNLIKSISSSKNPEDELDEAMKGQNFRDFT 340
           +ES+  L + QLE++  S+EIR  L++R+LQ LI  I SS NP+ EL++AM+G  FR+FT
Sbjct: 64  DESNHRLKRTQLEAVAASEEIRKMLRDRDLQELISKIDSSSNPKLELEKAMEGPYFREFT 123

Query: 339 EKILSIVSP 313
           +K+LS+++P
Sbjct: 124 DKLLSVINP 132


>ref|NP_194611.2| HIT-type zinc finger protein [Arabidopsis thaliana]
           gi|92856590|gb|ABE77404.1| At4g28820 [Arabidopsis
           thaliana] gi|332660149|gb|AEE85549.1| HIT-type zinc
           finger protein [Arabidopsis thaliana]
          Length = 173

 Score = 71.6 bits (174), Expect = 8e-11
 Identities = 38/74 (51%), Positives = 49/74 (66%)
 Frame = -2

Query: 522 VEESSCVLGKEQLESIVESKEIRDSLQNRELQNLIKSISSSKNPEDELDEAMKGQNFRDF 343
           VEE   +L K Q E+I  S EIR++L++  LQ LI SI SS NP  ELDEAM  + FR+F
Sbjct: 99  VEEEKYILEKTQFEAIASSSEIREALKDEPLQKLIYSIDSSSNPLQELDEAMGIEAFREF 158

Query: 342 TEKILSIVSPQEQD 301
           T+KILS +S    +
Sbjct: 159 TDKILSNISKSNDE 172


>ref|NP_001031741.1| HIT-type zinc finger protein [Arabidopsis thaliana]
           gi|51971437|dbj|BAD44383.1| unnamed protein product
           [Arabidopsis thaliana] gi|92856578|gb|ABE77402.1|
           At4g28820 [Arabidopsis thaliana]
           gi|332660150|gb|AEE85550.1| HIT-type zinc finger protein
           [Arabidopsis thaliana]
          Length = 172

 Score = 71.6 bits (174), Expect = 8e-11
 Identities = 38/74 (51%), Positives = 49/74 (66%)
 Frame = -2

Query: 522 VEESSCVLGKEQLESIVESKEIRDSLQNRELQNLIKSISSSKNPEDELDEAMKGQNFRDF 343
           VEE   +L K Q E+I  S EIR++L++  LQ LI SI SS NP  ELDEAM  + FR+F
Sbjct: 98  VEEEKYILEKTQFEAIASSSEIREALKDEPLQKLIYSIDSSSNPLQELDEAMGIEAFREF 157

Query: 342 TEKILSIVSPQEQD 301
           T+KILS +S    +
Sbjct: 158 TDKILSNISKSNDE 171


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