BLASTX nr result
ID: Dioscorea21_contig00008178
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00008178 (553 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABK22660.1| unknown [Picea sitchensis] 80 2e-13 ref|NP_001152218.1| HIT zinc finger family protein [Zea mays] gi... 74 1e-11 ref|XP_001785765.1| predicted protein [Physcomitrella patens sub... 72 6e-11 ref|NP_194611.2| HIT-type zinc finger protein [Arabidopsis thali... 72 8e-11 ref|NP_001031741.1| HIT-type zinc finger protein [Arabidopsis th... 72 8e-11 >gb|ABK22660.1| unknown [Picea sitchensis] Length = 159 Score = 80.5 bits (197), Expect = 2e-13 Identities = 39/79 (49%), Positives = 59/79 (74%) Frame = -2 Query: 540 PERLYQVEESSCVLGKEQLESIVESKEIRDSLQNRELQNLIKSISSSKNPEDELDEAMKG 361 P + +E L + QLE++V S EIR+ L+++ELQ +I I SS+N E+ELD+AM+G Sbjct: 75 PRSFEEEDEQGWRLHRTQLEAVVASSEIRNILKDQELQKIILRIDSSENAEEELDKAMEG 134 Query: 360 QNFRDFTEKILSIVSPQEQ 304 +F++FT+KILSI+SP+EQ Sbjct: 135 PHFQEFTDKILSIISPEEQ 153 >ref|NP_001152218.1| HIT zinc finger family protein [Zea mays] gi|195653953|gb|ACG46444.1| HIT zinc finger family protein [Zea mays] Length = 169 Score = 74.3 bits (181), Expect = 1e-11 Identities = 36/78 (46%), Positives = 53/78 (67%) Frame = -2 Query: 540 PERLYQVEESSCVLGKEQLESIVESKEIRDSLQNRELQNLIKSISSSKNPEDELDEAMKG 361 P + +VE+ S ++ +L S+ E K I D+L++ ELQ +I I S PE EL++ M+G Sbjct: 92 PTKALEVEDLSWLVDNNRLRSLAELKGIHDALRDPELQRMILQIDGSSEPEKELEKVMEG 151 Query: 360 QNFRDFTEKILSIVSPQE 307 Q FR+FT+KIL IV+PQE Sbjct: 152 QAFREFTDKILDIVNPQE 169 >ref|XP_001785765.1| predicted protein [Physcomitrella patens subsp. patens] gi|162662595|gb|EDQ49429.1| predicted protein [Physcomitrella patens subsp. patens] Length = 141 Score = 72.0 bits (175), Expect = 6e-11 Identities = 34/69 (49%), Positives = 53/69 (76%) Frame = -2 Query: 519 EESSCVLGKEQLESIVESKEIRDSLQNRELQNLIKSISSSKNPEDELDEAMKGQNFRDFT 340 +ES+ L + QLE++ S+EIR L++R+LQ LI I SS NP+ EL++AM+G FR+FT Sbjct: 64 DESNHRLKRTQLEAVAASEEIRKMLRDRDLQELISKIDSSSNPKLELEKAMEGPYFREFT 123 Query: 339 EKILSIVSP 313 +K+LS+++P Sbjct: 124 DKLLSVINP 132 >ref|NP_194611.2| HIT-type zinc finger protein [Arabidopsis thaliana] gi|92856590|gb|ABE77404.1| At4g28820 [Arabidopsis thaliana] gi|332660149|gb|AEE85549.1| HIT-type zinc finger protein [Arabidopsis thaliana] Length = 173 Score = 71.6 bits (174), Expect = 8e-11 Identities = 38/74 (51%), Positives = 49/74 (66%) Frame = -2 Query: 522 VEESSCVLGKEQLESIVESKEIRDSLQNRELQNLIKSISSSKNPEDELDEAMKGQNFRDF 343 VEE +L K Q E+I S EIR++L++ LQ LI SI SS NP ELDEAM + FR+F Sbjct: 99 VEEEKYILEKTQFEAIASSSEIREALKDEPLQKLIYSIDSSSNPLQELDEAMGIEAFREF 158 Query: 342 TEKILSIVSPQEQD 301 T+KILS +S + Sbjct: 159 TDKILSNISKSNDE 172 >ref|NP_001031741.1| HIT-type zinc finger protein [Arabidopsis thaliana] gi|51971437|dbj|BAD44383.1| unnamed protein product [Arabidopsis thaliana] gi|92856578|gb|ABE77402.1| At4g28820 [Arabidopsis thaliana] gi|332660150|gb|AEE85550.1| HIT-type zinc finger protein [Arabidopsis thaliana] Length = 172 Score = 71.6 bits (174), Expect = 8e-11 Identities = 38/74 (51%), Positives = 49/74 (66%) Frame = -2 Query: 522 VEESSCVLGKEQLESIVESKEIRDSLQNRELQNLIKSISSSKNPEDELDEAMKGQNFRDF 343 VEE +L K Q E+I S EIR++L++ LQ LI SI SS NP ELDEAM + FR+F Sbjct: 98 VEEEKYILEKTQFEAIASSSEIREALKDEPLQKLIYSIDSSSNPLQELDEAMGIEAFREF 157 Query: 342 TEKILSIVSPQEQD 301 T+KILS +S + Sbjct: 158 TDKILSNISKSNDE 171