BLASTX nr result
ID: Dioscorea21_contig00008175
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00008175
(875 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003588326.1| ATP synthase subunit alpha [Medicago truncat... 258 1e-66
ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula] ... 132 7e-44
ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii 269-3] gi... 89 1e-23
gb|ABP91180.1| unknown protein [Streptococcus suis 98HAH33] gi|1... 79 3e-23
gb|ACA05077.1| hypothetical protein [Flammeovirga yaeyamensis] 95 2e-17
>ref|XP_003588326.1| ATP synthase subunit alpha [Medicago truncatula]
gi|355477374|gb|AES58577.1| ATP synthase subunit alpha
[Medicago truncatula]
Length = 1116
Score = 258 bits (659), Expect = 1e-66
Identities = 123/127 (96%), Positives = 125/127 (98%)
Frame = +3
Query: 429 YRGCWHGVSRGFFLESCHDRALDERALQAALPFFTHAILLDRAFAHCPRFPTAAPRGSPG 608
YRGCWHGVSRGFFLESCHDRALDERALQAALPFFTHAILLDRAFAHCPRFPTAAPRGSPG
Sbjct: 935 YRGCWHGVSRGFFLESCHDRALDERALQAALPFFTHAILLDRAFAHCPRFPTAAPRGSPG 994
Query: 609 RVSVPVWLIIRKDQLSIIGLVSLYLTNYLILRRLIKQRF*A*FRIWPELFGRFPRVTHPF 788
RVSVPVWLIIRKDQLSIIGLVSLYLTNYLILRRLIKQRF A FRIWPELFGRFPR+THPF
Sbjct: 995 RVSVPVWLIIRKDQLSIIGLVSLYLTNYLILRRLIKQRFLAFFRIWPELFGRFPRITHPF 1054
Query: 789 ATLFSTI 809
ATLFST+
Sbjct: 1055 ATLFSTV 1061
Score = 130 bits (328), Expect = 3e-28
Identities = 65/80 (81%), Positives = 66/80 (82%)
Frame = +3
Query: 3 RIKPHAPPLVQAPVNSFEFRSCDRTPQAECFTR*LGP*SA*TKGEHSSFTAWTTRVSNPV 182
RIKPHAPPLVQAPVNSFEFRSCDRTP+ TKGEHSSFTAWTTRVSNPV
Sbjct: 862 RIKPHAPPLVQAPVNSFEFRSCDRTPE--------------TKGEHSSFTAWTTRVSNPV 907
Query: 183 RSPCFRTPASVGTQRAAFAF 242
RSPCFRTPASVGTQRAAFAF
Sbjct: 908 RSPCFRTPASVGTQRAAFAF 927
>ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula]
gi|355477385|gb|AES58588.1| Ribosomal protein S10
[Medicago truncatula]
Length = 1152
Score = 132 bits (333), Expect(2) = 7e-44
Identities = 70/95 (73%), Positives = 73/95 (76%)
Frame = -2
Query: 805 VENKVANGCVTRGNLPNSSGQILNQAQKRCXXXXXXXXXXXXXXLTKPMMLSWSFRMISH 626
VENKVANGCV RGNLPNSSGQIL +A+K LTKPMMLSWSFRMISH
Sbjct: 129 VENKVANGCVMRGNLPNSSGQILKKAKK----------------LTKPMMLSWSFRMISH 172
Query: 625 TGTETRPGLPRGAAVGNLGQWAKARSSNIA*VKKG 521
TGTETRPGLPRGAAVGNLGQWAKARSSNI + G
Sbjct: 173 TGTETRPGLPRGAAVGNLGQWAKARSSNICAIMTG 207
Score = 71.6 bits (174), Expect(2) = 7e-44
Identities = 34/34 (100%), Positives = 34/34 (100%)
Frame = -1
Query: 491 CAIMTGLEEEAPANSVPAAAVRRGGQVFFGMTGR 390
CAIMTGLEEEAPANSVPAAAVRRGGQVFFGMTGR
Sbjct: 202 CAIMTGLEEEAPANSVPAAAVRRGGQVFFGMTGR 235
Score = 129 bits (323), Expect = 1e-27
Identities = 65/83 (78%), Positives = 66/83 (79%)
Frame = -2
Query: 250 GRPKAKAALWVPTDAGVRKHGERTGLDTLVVHAVNDECSPLVYADQGPS*RVKHSAWGVR 71
G PKAKAALWVPTDAGVRKH ERTGLDTLVVHAVNDECSPLVY DQGP
Sbjct: 240 GTPKAKAALWVPTDAGVRKHRERTGLDTLVVHAVNDECSPLVYVDQGP------------ 287
Query: 70 SQDRNSKELTGACTSGGACGLIR 2
+RNSKELTGACTSGGACGLIR
Sbjct: 288 --NRNSKELTGACTSGGACGLIR 308
>ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii 269-3]
gi|238832245|gb|EEQ24559.1| pG1 protein [Lactobacillus
jensenii 269-3]
Length = 174
Score = 88.6 bits (218), Expect(2) = 1e-23
Identities = 55/121 (45%), Positives = 62/121 (51%), Gaps = 7/121 (5%)
Frame = +3
Query: 348 RLSLSTRFTAYVPFTXXXXXXXXXXXXYRGCWHGVSRGFFLESCHDRAL-------DERA 506
RLS T +A FT YRGCWH VSR F ++ +A
Sbjct: 54 RLSHQTYQSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTE 113
Query: 507 LQAALPFFTHAILLDRAFAHCPRFPTAAPRGSPGRVSVPVWLIIRKDQLSIIGLVSLYLT 686
L FFTHA LL + F HC RFPTAA R S GRVSVP+W I +L II LVS YLT
Sbjct: 114 LYDPKTFFTHAALLHQTFVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLT 173
Query: 687 N 689
N
Sbjct: 174 N 174
Score = 47.8 bits (112), Expect(2) = 1e-23
Identities = 29/54 (53%), Positives = 33/54 (61%), Gaps = 4/54 (7%)
Frame = +2
Query: 191 MLSHPSVGRDPESCLRFWPSFVDLRISPLHTKFHSPLSHS----SELVLRAFRQ 340
MLS SV PES LR W S + LRI PLH +F SPL HS S+ VLR R+
Sbjct: 1 MLSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFRSPLLHSRLTVSDAVLRLSRR 54
>gb|ABP91180.1| unknown protein [Streptococcus suis 98HAH33]
gi|145690754|gb|ABP91259.1| unknown protein
[Streptococcus suis 98HAH33] gi|145690985|gb|ABP91490.1|
unknown protein [Streptococcus suis 98HAH33]
gi|145691080|gb|ABP91585.1| unknown protein
[Streptococcus suis 98HAH33]
Length = 186
Score = 78.6 bits (192), Expect(4) = 3e-23
Identities = 42/69 (60%), Positives = 47/69 (68%)
Frame = +1
Query: 127 PRANTHRLRHGLPGYLILFAPHAFAPQRR*GPRELPSLLAFLRRSTDFTPTHEIPLSSVS 306
P +THRLR GLPGYLILFAPHAF PQR+ RE S FL ST FT TH IPLS +
Sbjct: 23 PTPSTHRLRRGLPGYLILFAPHAFEPQRQLQTREPLSPPVFLHISTHFTATHGIPLSPSA 82
Query: 307 LK*IGFESI 333
LK F+S+
Sbjct: 83 LKFDSFQSV 91
Score = 38.1 bits (87), Expect(4) = 3e-23
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = +2
Query: 524 LLHSRDIAGSGFRPLSKIPHCCPP 595
LLHSR +A SG PL KIP+CC P
Sbjct: 163 LLHSRGVARSGLPPLPKIPYCCLP 186
Score = 32.0 bits (71), Expect(4) = 3e-23
Identities = 17/40 (42%), Positives = 18/40 (45%)
Frame = +3
Query: 351 LSLSTRFTAYVPFTXXXXXXXXXXXXYRGCWHGVSRGFFL 470
L L T TA FT YRGCWH VSR F +
Sbjct: 98 LLLQTYQTACARFTPNKSGQRSGPTYYRGCWHVVSRPFLV 137
Score = 26.2 bits (56), Expect(4) = 3e-23
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +2
Query: 65 LRPYSPGGVFHALAGPL 115
+R YSPGGV +ALA L
Sbjct: 1 MRSYSPGGVLNALAAAL 17
>gb|ACA05077.1| hypothetical protein [Flammeovirga yaeyamensis]
Length = 104
Score = 94.7 bits (234), Expect = 2e-17
Identities = 49/74 (66%), Positives = 52/74 (70%)
Frame = +3
Query: 3 RIKPHAPPLVQAPVNSFEFRSCDRTPQAECFTR*LGP*SA*TKGEHSSFTAWTTRVSNPV 182
RIKPHAPPLV+ PVNSFEF C RTPQ E F+ LG T+ E SSFTAWTTRVSNPV
Sbjct: 31 RIKPHAPPLVRTPVNSFEFHRCRRTPQVENFSVSLGLACQRTQAEFSSFTAWTTRVSNPV 90
Query: 183 RSPCFRTPASVGTQ 224
RSP FR S Q
Sbjct: 91 RSPRFRASVSNNAQ 104