BLASTX nr result

ID: Dioscorea21_contig00008102 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00008102
         (672 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311659.1| predicted protein [Populus trichocarpa] gi|2...   184   2e-44
ref|XP_002315735.1| predicted protein [Populus trichocarpa] gi|2...   178   7e-43
emb|CBI26359.3| unnamed protein product [Vitis vinifera]              156   3e-36
gb|EEC76158.1| hypothetical protein OsI_13460 [Oryza sativa Indi...   147   2e-33
ref|NP_001051229.1| Os03g0742800 [Oryza sativa Japonica Group] g...   147   2e-33

>ref|XP_002311659.1| predicted protein [Populus trichocarpa] gi|222851479|gb|EEE89026.1|
           predicted protein [Populus trichocarpa]
          Length = 753

 Score =  184 bits (466), Expect = 2e-44
 Identities = 104/209 (49%), Positives = 124/209 (59%)
 Frame = +3

Query: 45  MDFAELEAIEGLRXXXXXXXXXXXXXXELVVPPSVLFTPLMXXXXXXXXXXXXXXXXXXX 224
           MDF ELEAIEGLR               LV+P S++ TPLM                   
Sbjct: 1   MDFVELEAIEGLRWSWNAWPTTKNQVSSLVIPLSIMCTPLMQSTELPILTYDPLICTRCA 60

Query: 225 XXXXXXARVDYRSAVWSCPFCLARNPFPRAYAGIADHNLPAELFPTHSTVEYXXXXXXXX 404
                 ARVDY+S +W CPFC  RNPFP +Y+GI + NLPAELFPT++TVEY        
Sbjct: 61  AVLNPYARVDYQSRIWVCPFCYNRNPFPISYSGIGETNLPAELFPTYNTVEYKIDKVDSK 120

Query: 405 XXXXXXXAGFDAAKAVTGPSFVFVIDACTEESEFRALKNEILHVVAQLPENALVGLVSFG 584
                   GF    A   P FVF++DAC  E E RA+KNE+L VV QLPENALVGL++F 
Sbjct: 121 FR------GF----AGPVPVFVFLVDACMVEEELRAVKNELLLVVEQLPENALVGLITFD 170

Query: 585 AMVWVHDLGFSDCSRVVVLCGDRELSAEK 671
           AMV V+DLGFSDCSRVVV  G RE+S+E+
Sbjct: 171 AMVRVYDLGFSDCSRVVVFHGGREVSSEQ 199


>ref|XP_002315735.1| predicted protein [Populus trichocarpa] gi|222864775|gb|EEF01906.1|
           predicted protein [Populus trichocarpa]
          Length = 753

 Score =  178 bits (452), Expect = 7e-43
 Identities = 100/209 (47%), Positives = 120/209 (57%)
 Frame = +3

Query: 45  MDFAELEAIEGLRXXXXXXXXXXXXXXELVVPPSVLFTPLMXXXXXXXXXXXXXXXXXXX 224
           MDF ELEAIEGLR               L++P S++ TPLM                   
Sbjct: 1   MDFIELEAIEGLRWSWNAWPTTKNQVSTLIIPLSIMCTPLMQSTELPILPYDPLICTRCA 60

Query: 225 XXXXXXARVDYRSAVWSCPFCLARNPFPRAYAGIADHNLPAELFPTHSTVEYXXXXXXXX 404
                 ARVDY+S +W CPFC  RN FP +Y GI + NLPAELFPT+STVEY        
Sbjct: 61  AVLNPYARVDYQSRIWVCPFCYNRNHFPISYLGIGETNLPAELFPTYSTVEYKIDKVDPK 120

Query: 405 XXXXXXXAGFDAAKAVTGPSFVFVIDACTEESEFRALKNEILHVVAQLPENALVGLVSFG 584
                             P+FVFV+DAC  E E RA+KNE+L VV QLPENALVGL++F 
Sbjct: 121 FRGLVGPV----------PAFVFVVDACMVEEELRAVKNELLLVVEQLPENALVGLLTFD 170

Query: 585 AMVWVHDLGFSDCSRVVVLCGDRELSAEK 671
           AMV V+DLGFS+CSRVVV  G RE+S+E+
Sbjct: 171 AMVRVYDLGFSECSRVVVFHGGREVSSEQ 199


>emb|CBI26359.3| unnamed protein product [Vitis vinifera]
          Length = 966

 Score =  156 bits (395), Expect = 3e-36
 Identities = 95/209 (45%), Positives = 121/209 (57%)
 Frame = +3

Query: 45  MDFAELEAIEGLRXXXXXXXXXXXXXXELVVPPSVLFTPLMXXXXXXXXXXXXXXXXXXX 224
           MDF ELE IEGLR               LV+P S++ TPLM                   
Sbjct: 1   MDFVELETIEGLRWTWNSWPPFKPDASALVIPLSIMCTPLMQSSELPL------------ 48

Query: 225 XXXXXXARVDYRSAVWSCPFCLARNPFPRAYAGIADHNLPAELFPTHSTVEYXXXXXXXX 404
                   + Y   +  C  C A N FPR+Y+GI ++NLPAELFPT+STVEY        
Sbjct: 49  --------LQYDPLI--CSRCGA-NSFPRSYSGIGENNLPAELFPTYSTVEYQLVSSFSS 97

Query: 405 XXXXXXXAGFDAAKAVTGPSFVFVIDACTEESEFRALKNEILHVVAQLPENALVGLVSFG 584
                  +G D+   V GP+FVFV+DAC+   E RALKNE+LHV+AQLPEN +VGLV+F 
Sbjct: 98  SSL----SGADSR--VLGPAFVFVVDACSAAEELRALKNELLHVLAQLPENTMVGLVTFD 151

Query: 585 AMVWVHDLGFSDCSRVVVLCGDRELSAEK 671
           +MV VHDL F++CSRVV+  GDRELS+++
Sbjct: 152 SMVCVHDLCFAECSRVVLFHGDRELSSDQ 180


>gb|EEC76158.1| hypothetical protein OsI_13460 [Oryza sativa Indica Group]
          Length = 757

 Score =  147 bits (371), Expect = 2e-33
 Identities = 100/221 (45%), Positives = 113/221 (51%), Gaps = 12/221 (5%)
 Frame = +3

Query: 45  MDFAELEAIEGLRXXXXXXXXXXXXXXELVVPPSVLFTPLMXXXXXXXXXXXXXXXXXXX 224
           MDFAELEA+EGLR               LVVP SVL TPL                    
Sbjct: 1   MDFAELEAVEGLRWPWHAWPPTASAAASLVVPTSVLCTPLHPAAPDLLPLLPYAPLRCGG 60

Query: 225 XXXXXX--------ARVDYRSAVWSCPFCLAR-NPFPRAYAGIADHNLPAELFPTHSTVE 377
                         +RV + +A W+CPFC A  NPFPR  A  A   LPAELFPTHS+VE
Sbjct: 61  GGGGGGCGAALNPFSRVHHATARWACPFCGASANPFPRLLAPDA---LPAELFPTHSSVE 117

Query: 378 YXXXXXXXXXXXXXXXAGFDAAKAVTGP---SFVFVIDACTEESEFRALKNEILHVVAQL 548
           Y                  DAA+A  GP   S VFV+DA T   E  ALK E+L VV  L
Sbjct: 118 YALPP--------------DAAEAGGGPGPPSVVFVVDAATSGPELAALKAEVLRVVQGL 163

Query: 549 PENALVGLVSFGAMVWVHDLGFSDCSRVVVLCGDRELSAEK 671
           PE   V LVSF A VWVHDLGF  C+RVVV+ G+REL +EK
Sbjct: 164 PEGVRVALVSFAASVWVHDLGFEGCTRVVVMNGERELESEK 204


>ref|NP_001051229.1| Os03g0742800 [Oryza sativa Japonica Group]
           gi|40539042|gb|AAR87299.1| putative protein transport
           SEC23-related protein [Oryza sativa Japonica Group]
           gi|108711012|gb|ABF98807.1| Sec23/Sec24 trunk domain
           containing protein, expressed [Oryza sativa Japonica
           Group] gi|108711013|gb|ABF98808.1| Sec23/Sec24 trunk
           domain containing protein, expressed [Oryza sativa
           Japonica Group] gi|108711014|gb|ABF98809.1| Sec23/Sec24
           trunk domain containing protein, expressed [Oryza sativa
           Japonica Group] gi|113549700|dbj|BAF13143.1|
           Os03g0742800 [Oryza sativa Japonica Group]
           gi|215697219|dbj|BAG91213.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215734988|dbj|BAG95710.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 757

 Score =  147 bits (371), Expect = 2e-33
 Identities = 100/221 (45%), Positives = 113/221 (51%), Gaps = 12/221 (5%)
 Frame = +3

Query: 45  MDFAELEAIEGLRXXXXXXXXXXXXXXELVVPPSVLFTPLMXXXXXXXXXXXXXXXXXXX 224
           MDFAELEA+EGLR               LVVP SVL TPL                    
Sbjct: 1   MDFAELEAVEGLRWPWHAWPPTASAAASLVVPTSVLCTPLHPAAPDLLPLLPYAPLRCGG 60

Query: 225 XXXXXX--------ARVDYRSAVWSCPFCLAR-NPFPRAYAGIADHNLPAELFPTHSTVE 377
                         +RV + +A W+CPFC A  NPFPR  A  A   LPAELFPTHS+VE
Sbjct: 61  GGGGGGCGAALNPFSRVHHATARWACPFCGASANPFPRLLAPDA---LPAELFPTHSSVE 117

Query: 378 YXXXXXXXXXXXXXXXAGFDAAKAVTGP---SFVFVIDACTEESEFRALKNEILHVVAQL 548
           Y                  DAA+A  GP   S VFV+DA T   E  ALK E+L VV  L
Sbjct: 118 YALPP--------------DAAEAGGGPGPPSVVFVVDAATSGPELAALKAEVLRVVQGL 163

Query: 549 PENALVGLVSFGAMVWVHDLGFSDCSRVVVLCGDRELSAEK 671
           PE   V LVSF A VWVHDLGF  C+RVVV+ G+REL +EK
Sbjct: 164 PEGVRVALVSFAASVWVHDLGFEGCTRVVVMNGERELESEK 204


Top