BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00008077
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300409.1| glutamate-gated kainate-type ion channel rec...    62   6e-08
ref|XP_002310140.1| glutamate-gated kainate-type ion channel rec...    57   1e-06
ref|XP_002300414.1| glutamate-gated kainate-type ion channel rec...    57   1e-06
ref|XP_002300413.1| glutamate-gated kainate-type ion channel rec...    57   1e-06
ref|XP_002327147.1| glutamate-gated kainate-type ion channel rec...    55   8e-06

>ref|XP_002300409.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222847667|gb|EEE85214.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 782

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 36/92 (39%), Positives = 54/92 (58%), Gaps = 5/92 (5%)
 Frame = -1

Query: 261 FRKRYPTKHQELK-----ISAMYGHDAIHAITIGMAESKKRRTTLLEGILESKFEGLSGS 97
           FRKR+  ++ E +     I A+  +DAI  I   +  S +R   LLE +L++ F+GLSG 
Sbjct: 251 FRKRFRRENPEEENNEPGIYAVQAYDAIWTIARALKGSNRRNQELLEKVLQTDFQGLSGK 310

Query: 96  IQFGNDGIRLLENNSLAFQVINFVGKSYRKMG 1
           +QF N  +   +     FQ+IN VGKSYR++G
Sbjct: 311 VQFNNHKMAPTQ----MFQIINVVGKSYRELG 338


>ref|XP_002310140.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222853043|gb|EEE90590.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 760

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 37/90 (41%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
 Frame = -1

Query: 261 FRKRYPT-KHQELKISAMYGHDAIHAITIG--MAESKKRRTTLLEGILESKFEGLSGSIQ 91
           FR  YP  ++ +  I A+  +DAI  +     M   K    TLL+ IL S FEGLSG I 
Sbjct: 311 FRAEYPEDRNSQPSIFALRAYDAIWTVAKSSKMLHEKNYSKTLLQHILSSDFEGLSGRIH 370

Query: 90  FGNDGIRLLENNSLAFQVINFVGKSYRKMG 1
           F N  +    N    FQ++N VGKSYR++G
Sbjct: 371 FTNYKLTYGPN----FQIVNIVGKSYRELG 396


>ref|XP_002300414.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222847672|gb|EEE85219.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 866

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 31/90 (34%), Positives = 53/90 (58%), Gaps = 3/90 (3%)
 Frame = -1

Query: 261 FRKRYPTKHQ-ELKISAMYGHDAIHAITIGMAE--SKKRRTTLLEGILESKFEGLSGSIQ 91
           FR++YP + + E  I A+  +DA+  I +G+ +  SK+    LLE IL++ F GLSG ++
Sbjct: 305 FRRKYPREERNEPGIYAVQAYDAMRTIALGLNKTGSKRGGKELLENILDADFHGLSGKVK 364

Query: 90  FGNDGIRLLENNSLAFQVINFVGKSYRKMG 1
           F N  +   E     F+++N +G  Y ++G
Sbjct: 365 FKNQNVAAAE----IFEIVNVIGTGYNELG 390


>ref|XP_002300413.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222847671|gb|EEE85218.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 1005

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 31/90 (34%), Positives = 53/90 (58%), Gaps = 3/90 (3%)
 Frame = -1

Query: 261 FRKRYPTKHQ-ELKISAMYGHDAIHAITIGMAE--SKKRRTTLLEGILESKFEGLSGSIQ 91
           FR++YP + + E  I A+  +DA+  I +G+ +  SK+    LLE IL++ F GLSG ++
Sbjct: 249 FRRKYPREERNEPGIYAVQAYDAMRTIALGLNKTGSKRGGKELLENILDADFHGLSGKVK 308

Query: 90  FGNDGIRLLENNSLAFQVINFVGKSYRKMG 1
           F N  +   E     F+++N +G  Y ++G
Sbjct: 309 FKNQNVAAAE----IFEIVNVIGTGYNELG 334


>ref|XP_002327147.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222835462|gb|EEE73897.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 765

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 38/94 (40%), Positives = 55/94 (58%), Gaps = 8/94 (8%)
 Frame = -1

Query: 261 FRKRYPTKHQELK------ISAMYGHDAIHAITIGMAESKKRRTT--LLEGILESKFEGL 106
           FRK+Y +K+ E +      I A+  +DA  AI   M +S+ + T+  L   IL S FEGL
Sbjct: 206 FRKKYGSKYPEEEEYSNPSIFALRAYDATWAIARAMEKSQGKITSKELSGNILSSNFEGL 265

Query: 105 SGSIQFGNDGIRLLENNSLAFQVINFVGKSYRKM 4
           SG+++F N+ +      S +FQ+IN VG SYR M
Sbjct: 266 SGTVRFENNVLW----QSPSFQIINVVGNSYRVM 295