BLASTX nr result

ID: Dioscorea21_contig00008072 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00008072
         (504 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ94056.1| predicted protein [Hordeum vulgare subsp. vulgare]     63   3e-08
ref|NP_001148371.1| CP5 [Zea mays] gi|195618680|gb|ACG31170.1| C...    62   6e-08
gb|AFW57829.1| hypothetical protein ZEAMMB73_202405 [Zea mays]         60   1e-07
gb|ACG40939.1| CP5 [Zea mays]                                          59   3e-07
gb|AFW66618.1| hypothetical protein ZEAMMB73_358635, partial [Ze...    58   9e-07

>dbj|BAJ94056.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 458

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 39/103 (37%), Positives = 58/103 (56%), Gaps = 6/103 (5%)
 Frame = -2

Query: 299 ELALLSAPISVAVLIGLLLGWAWKPKWAVDLVSGLQQPTGLPRLDSMKPHLPSFIAS--- 129
           E+ALL+ P+  A L+GLLLGWAW+P+WA  +V+    P  L  LD  +  LP+ I +   
Sbjct: 68  EMALLAGPLWAAALVGLLLGWAWRPRWAAGIVAPADPPQ-LASLDFWRAQLPARIRAPLD 126

Query: 128 FIPDKVEPTEFPPRSTEMG---LGSRKLAVMDEDLEYLHRLVE 9
           ++    +  E    ++  G   +G  +LAV  +DL  L RLVE
Sbjct: 127 YLAGARQQQEDDDEASLHGSSEMGKEELAVGKDDLVNLWRLVE 169


>ref|NP_001148371.1| CP5 [Zea mays] gi|195618680|gb|ACG31170.1| CP5 [Zea mays]
          Length = 421

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 42/119 (35%), Positives = 64/119 (53%), Gaps = 5/119 (4%)
 Frame = -2

Query: 350 ILGIFAMAMTTETNLLVELALLSAPISVAVLIGLLLGWAWKPKWA-VDLVSGLQQPTGLP 174
           ++GIF     T     +ELA L+AP+S+A L+GLL+GWAW+P+WA V +V   QQ   LP
Sbjct: 8   LMGIFRQQ--TLGGAALELAALAAPLSLAALVGLLIGWAWRPRWAGVVVVDNAQQMAQLP 65

Query: 173 RLDSMKPHLPSFIASFIPDKVEPTEFPPRSTEMGLGS----RKLAVMDEDLEYLHRLVE 9
              +  P   +   + +  + E     PR+      +    ++LAV   DL +L RLV+
Sbjct: 66  AA-AAPPDRATATTTAVVSRNEAAAVVPRTVVAHAAAEDEQQQLAVNTGDLMHLWRLVD 123


>gb|AFW57829.1| hypothetical protein ZEAMMB73_202405 [Zea mays]
          Length = 222

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 43/119 (36%), Positives = 63/119 (52%), Gaps = 5/119 (4%)
 Frame = -2

Query: 350 ILGIFAMAMTTETNLLVELALLSAPISVAVLIGLLLGWAWKPKWA-VDLVSGLQQPTGLP 174
           ++GIF     T     +ELA L+AP+S+A L+GLL+GWAW+P+WA V  V   QQ   LP
Sbjct: 8   LMGIFRQQ--TLGGAALELAALAAPLSLAALVGLLIGWAWRPRWAGVVTVDNAQQMAQLP 65

Query: 173 RLDSMKPHLPSFIASFIPDKVEPTEFPPRSTEMGLGS----RKLAVMDEDLEYLHRLVE 9
              +  P      A+ +  + E     PR+      +    ++LAV   DL +L RLV+
Sbjct: 66  ---AAAPPPDRATATAVVSRNEAAAVVPRTVVAHAAAEDEQQQLAVNTGDLLHLWRLVD 121


>gb|ACG40939.1| CP5 [Zea mays]
          Length = 421

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 41/119 (34%), Positives = 63/119 (52%), Gaps = 5/119 (4%)
 Frame = -2

Query: 350 ILGIFAMAMTTETNLLVELALLSAPISVAVLIGLLLGWAWKPKWA-VDLVSGLQQPTGLP 174
           ++GIF     T     +ELA L+AP+S+A L+GLL+GWAW+P+WA V +    QQ   LP
Sbjct: 8   LMGIFRQQ--TLGGAALELAALAAPLSLAALVGLLIGWAWRPRWAGVVVFDNAQQMAQLP 65

Query: 173 RLDSMKPHLPSFIASFIPDKVEPTEFPPRSTEMGLGS----RKLAVMDEDLEYLHRLVE 9
              +  P   +   + +  + E     PR+      +    ++LAV   DL +L RLV+
Sbjct: 66  AA-AAPPDRATATTTAVVSRNEAAAVVPRTVVAHAAAEDEQQQLAVNTGDLIHLWRLVD 123


>gb|AFW66618.1| hypothetical protein ZEAMMB73_358635, partial [Zea mays]
          Length = 262

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 42/110 (38%), Positives = 57/110 (51%), Gaps = 13/110 (11%)
 Frame = -2

Query: 299 ELALLSAPISVAVLIGLLLGWAWKPKWAVDLV-----SGLQQPTGLPRLDSMKPHLPSFI 135
           E+ALL+ P+  AVL+GLLLGWAW+P+WA  LV     +   QP     L   K  LP+ +
Sbjct: 23  EMALLAGPLWAAVLLGLLLGWAWRPRWAAGLVAAPAPAAAAQPP-FATLGFWKAQLPARL 81

Query: 134 ASFI--------PDKVEPTEFPPRSTEMGLGSRKLAVMDEDLEYLHRLVE 9
            + +         ++ E  E   R +    GS +LAV   DL  L RLVE
Sbjct: 82  RAPLGSAAAVRHGEEEEEDEVSVRGSSEA-GSEELAVGKRDLANLWRLVE 130