BLASTX nr result
ID: Dioscorea21_contig00008071
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00008071 (267 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002264834.1| PREDICTED: heterogeneous nuclear ribonucleop... 146 2e-33 gb|AFW61381.1| hypothetical protein ZEAMMB73_029405 [Zea mays] 141 6e-32 ref|NP_001130564.1| uncharacterized protein LOC100191663 [Zea ma... 141 6e-32 gb|AAX95168.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP d... 138 4e-31 gb|EAY80523.1| hypothetical protein OsI_35702 [Oryza sativa Indi... 138 4e-31 >ref|XP_002264834.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q [Vitis vinifera] gi|296088998|emb|CBI38701.3| unnamed protein product [Vitis vinifera] Length = 476 Score = 146 bits (368), Expect = 2e-33 Identities = 65/88 (73%), Positives = 81/88 (92%) Frame = +3 Query: 3 FVEYYNHACAEYARQKMSGANFKIDGSTPTVSWAEPKNAADASAAAQVKCVYVKNLPENV 182 FVEYYN+ACA+Y RQKMS +NFK+DG+TPTVSWA+PK+ +D SAAAQVK +YVKN+PEN Sbjct: 228 FVEYYNNACADYGRQKMSSSNFKLDGNTPTVSWADPKSTSDHSAAAQVKALYVKNIPENT 287 Query: 183 TSEKLKEIFGRHGEVTKVVLPPAKAGQN 266 T+E+LKE+F RHGEVTKVV+PPAK+GQ+ Sbjct: 288 TTEQLKELFQRHGEVTKVVMPPAKSGQS 315 >gb|AFW61381.1| hypothetical protein ZEAMMB73_029405 [Zea mays] Length = 465 Score = 141 bits (355), Expect = 6e-32 Identities = 66/87 (75%), Positives = 77/87 (88%), Gaps = 1/87 (1%) Frame = +3 Query: 3 FVEYYNHACAEYARQKMSGANFKIDGSTPTVSWAEPKNAADA-SAAAQVKCVYVKNLPEN 179 FVEYYNHACA+YARQK+S NFK+DGS TVSWAEPK + DA SAAAQVK +YVKNLPEN Sbjct: 230 FVEYYNHACADYARQKLSSPNFKVDGSQLTVSWAEPKGSTDASSAAAQVKTIYVKNLPEN 289 Query: 180 VTSEKLKEIFGRHGEVTKVVLPPAKAG 260 V+ EK+K++F +HGEVTK+VLPPAKAG Sbjct: 290 VSKEKIKDLFDKHGEVTKIVLPPAKAG 316 >ref|NP_001130564.1| uncharacterized protein LOC100191663 [Zea mays] gi|194689494|gb|ACF78831.1| unknown [Zea mays] gi|219887513|gb|ACL54131.1| unknown [Zea mays] gi|238010456|gb|ACR36263.1| unknown [Zea mays] gi|413921450|gb|AFW61382.1| hypothetical protein ZEAMMB73_029405 [Zea mays] gi|413921451|gb|AFW61383.1| hypothetical protein ZEAMMB73_029405 [Zea mays] gi|413921452|gb|AFW61384.1| hypothetical protein ZEAMMB73_029405 [Zea mays] gi|413921453|gb|AFW61385.1| hypothetical protein ZEAMMB73_029405 [Zea mays] Length = 467 Score = 141 bits (355), Expect = 6e-32 Identities = 66/87 (75%), Positives = 77/87 (88%), Gaps = 1/87 (1%) Frame = +3 Query: 3 FVEYYNHACAEYARQKMSGANFKIDGSTPTVSWAEPKNAADA-SAAAQVKCVYVKNLPEN 179 FVEYYNHACA+YARQK+S NFK+DGS TVSWAEPK + DA SAAAQVK +YVKNLPEN Sbjct: 232 FVEYYNHACADYARQKLSSPNFKVDGSQLTVSWAEPKGSTDASSAAAQVKTIYVKNLPEN 291 Query: 180 VTSEKLKEIFGRHGEVTKVVLPPAKAG 260 V+ EK+K++F +HGEVTK+VLPPAKAG Sbjct: 292 VSKEKIKDLFDKHGEVTKIVLPPAKAG 318 >gb|AAX95168.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain), putative [Oryza sativa Japonica Group] gi|77549578|gb|ABA92375.1| RNA recognition motif family protein, expressed [Oryza sativa Japonica Group] gi|222615796|gb|EEE51928.1| hypothetical protein OsJ_33542 [Oryza sativa Japonica Group] Length = 465 Score = 138 bits (348), Expect = 4e-31 Identities = 66/87 (75%), Positives = 76/87 (87%), Gaps = 1/87 (1%) Frame = +3 Query: 3 FVEYYNHACAEYARQKMSGANFKIDGSTPTVSWAEPKNAAD-ASAAAQVKCVYVKNLPEN 179 FVEYYNHACA+YARQK+S NFK+DGS TVSWAEPK ++D +SAAAQVK +YVKNLPEN Sbjct: 231 FVEYYNHACADYARQKLSAPNFKVDGSQLTVSWAEPKGSSDSSSAAAQVKTIYVKNLPEN 290 Query: 180 VTSEKLKEIFGRHGEVTKVVLPPAKAG 260 + EK+KEIF +HGEVTKVVLPPAK G Sbjct: 291 ASKEKIKEIFEKHGEVTKVVLPPAKDG 317 >gb|EAY80523.1| hypothetical protein OsI_35702 [Oryza sativa Indica Group] Length = 468 Score = 138 bits (348), Expect = 4e-31 Identities = 66/87 (75%), Positives = 76/87 (87%), Gaps = 1/87 (1%) Frame = +3 Query: 3 FVEYYNHACAEYARQKMSGANFKIDGSTPTVSWAEPKNAAD-ASAAAQVKCVYVKNLPEN 179 FVEYYNHACA+YARQK+S NFK+DGS TVSWAEPK ++D +SAAAQVK +YVKNLPEN Sbjct: 234 FVEYYNHACADYARQKLSAPNFKVDGSQLTVSWAEPKGSSDSSSAAAQVKTIYVKNLPEN 293 Query: 180 VTSEKLKEIFGRHGEVTKVVLPPAKAG 260 + EK+KEIF +HGEVTKVVLPPAK G Sbjct: 294 ASKEKIKEIFEKHGEVTKVVLPPAKDG 320