BLASTX nr result

ID: Dioscorea21_contig00008071 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00008071
         (267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264834.1| PREDICTED: heterogeneous nuclear ribonucleop...   146   2e-33
gb|AFW61381.1| hypothetical protein ZEAMMB73_029405 [Zea mays]        141   6e-32
ref|NP_001130564.1| uncharacterized protein LOC100191663 [Zea ma...   141   6e-32
gb|AAX95168.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP d...   138   4e-31
gb|EAY80523.1| hypothetical protein OsI_35702 [Oryza sativa Indi...   138   4e-31

>ref|XP_002264834.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q [Vitis
           vinifera] gi|296088998|emb|CBI38701.3| unnamed protein
           product [Vitis vinifera]
          Length = 476

 Score =  146 bits (368), Expect = 2e-33
 Identities = 65/88 (73%), Positives = 81/88 (92%)
 Frame = +3

Query: 3   FVEYYNHACAEYARQKMSGANFKIDGSTPTVSWAEPKNAADASAAAQVKCVYVKNLPENV 182
           FVEYYN+ACA+Y RQKMS +NFK+DG+TPTVSWA+PK+ +D SAAAQVK +YVKN+PEN 
Sbjct: 228 FVEYYNNACADYGRQKMSSSNFKLDGNTPTVSWADPKSTSDHSAAAQVKALYVKNIPENT 287

Query: 183 TSEKLKEIFGRHGEVTKVVLPPAKAGQN 266
           T+E+LKE+F RHGEVTKVV+PPAK+GQ+
Sbjct: 288 TTEQLKELFQRHGEVTKVVMPPAKSGQS 315


>gb|AFW61381.1| hypothetical protein ZEAMMB73_029405 [Zea mays]
          Length = 465

 Score =  141 bits (355), Expect = 6e-32
 Identities = 66/87 (75%), Positives = 77/87 (88%), Gaps = 1/87 (1%)
 Frame = +3

Query: 3   FVEYYNHACAEYARQKMSGANFKIDGSTPTVSWAEPKNAADA-SAAAQVKCVYVKNLPEN 179
           FVEYYNHACA+YARQK+S  NFK+DGS  TVSWAEPK + DA SAAAQVK +YVKNLPEN
Sbjct: 230 FVEYYNHACADYARQKLSSPNFKVDGSQLTVSWAEPKGSTDASSAAAQVKTIYVKNLPEN 289

Query: 180 VTSEKLKEIFGRHGEVTKVVLPPAKAG 260
           V+ EK+K++F +HGEVTK+VLPPAKAG
Sbjct: 290 VSKEKIKDLFDKHGEVTKIVLPPAKAG 316


>ref|NP_001130564.1| uncharacterized protein LOC100191663 [Zea mays]
           gi|194689494|gb|ACF78831.1| unknown [Zea mays]
           gi|219887513|gb|ACL54131.1| unknown [Zea mays]
           gi|238010456|gb|ACR36263.1| unknown [Zea mays]
           gi|413921450|gb|AFW61382.1| hypothetical protein
           ZEAMMB73_029405 [Zea mays] gi|413921451|gb|AFW61383.1|
           hypothetical protein ZEAMMB73_029405 [Zea mays]
           gi|413921452|gb|AFW61384.1| hypothetical protein
           ZEAMMB73_029405 [Zea mays] gi|413921453|gb|AFW61385.1|
           hypothetical protein ZEAMMB73_029405 [Zea mays]
          Length = 467

 Score =  141 bits (355), Expect = 6e-32
 Identities = 66/87 (75%), Positives = 77/87 (88%), Gaps = 1/87 (1%)
 Frame = +3

Query: 3   FVEYYNHACAEYARQKMSGANFKIDGSTPTVSWAEPKNAADA-SAAAQVKCVYVKNLPEN 179
           FVEYYNHACA+YARQK+S  NFK+DGS  TVSWAEPK + DA SAAAQVK +YVKNLPEN
Sbjct: 232 FVEYYNHACADYARQKLSSPNFKVDGSQLTVSWAEPKGSTDASSAAAQVKTIYVKNLPEN 291

Query: 180 VTSEKLKEIFGRHGEVTKVVLPPAKAG 260
           V+ EK+K++F +HGEVTK+VLPPAKAG
Sbjct: 292 VSKEKIKDLFDKHGEVTKIVLPPAKAG 318


>gb|AAX95168.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain), putative
           [Oryza sativa Japonica Group] gi|77549578|gb|ABA92375.1|
           RNA recognition motif family protein, expressed [Oryza
           sativa Japonica Group] gi|222615796|gb|EEE51928.1|
           hypothetical protein OsJ_33542 [Oryza sativa Japonica
           Group]
          Length = 465

 Score =  138 bits (348), Expect = 4e-31
 Identities = 66/87 (75%), Positives = 76/87 (87%), Gaps = 1/87 (1%)
 Frame = +3

Query: 3   FVEYYNHACAEYARQKMSGANFKIDGSTPTVSWAEPKNAAD-ASAAAQVKCVYVKNLPEN 179
           FVEYYNHACA+YARQK+S  NFK+DGS  TVSWAEPK ++D +SAAAQVK +YVKNLPEN
Sbjct: 231 FVEYYNHACADYARQKLSAPNFKVDGSQLTVSWAEPKGSSDSSSAAAQVKTIYVKNLPEN 290

Query: 180 VTSEKLKEIFGRHGEVTKVVLPPAKAG 260
            + EK+KEIF +HGEVTKVVLPPAK G
Sbjct: 291 ASKEKIKEIFEKHGEVTKVVLPPAKDG 317


>gb|EAY80523.1| hypothetical protein OsI_35702 [Oryza sativa Indica Group]
          Length = 468

 Score =  138 bits (348), Expect = 4e-31
 Identities = 66/87 (75%), Positives = 76/87 (87%), Gaps = 1/87 (1%)
 Frame = +3

Query: 3   FVEYYNHACAEYARQKMSGANFKIDGSTPTVSWAEPKNAAD-ASAAAQVKCVYVKNLPEN 179
           FVEYYNHACA+YARQK+S  NFK+DGS  TVSWAEPK ++D +SAAAQVK +YVKNLPEN
Sbjct: 234 FVEYYNHACADYARQKLSAPNFKVDGSQLTVSWAEPKGSSDSSSAAAQVKTIYVKNLPEN 293

Query: 180 VTSEKLKEIFGRHGEVTKVVLPPAKAG 260
            + EK+KEIF +HGEVTKVVLPPAK G
Sbjct: 294 ASKEKIKEIFEKHGEVTKVVLPPAKDG 320


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