BLASTX nr result
ID: Dioscorea21_contig00008029
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00008029 (1009 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003551375.1| PREDICTED: RNA-binding protein pno1-like [Gl... 338 1e-90 gb|ACU24003.1| unknown [Glycine max] 338 1e-90 ref|XP_003551374.1| PREDICTED: RNA-binding protein pno1-like [Gl... 337 4e-90 gb|AFW84870.1| putative partner of Nob1 family protein [Zea mays] 335 8e-90 ref|NP_001149708.1| partner of Nob1 [Zea mays] gi|194703132|gb|A... 335 1e-89 >ref|XP_003551375.1| PREDICTED: RNA-binding protein pno1-like [Glycine max] Length = 220 Score = 338 bits (867), Expect = 1e-90 Identities = 169/213 (79%), Positives = 188/213 (88%), Gaps = 2/213 (0%) Frame = -3 Query: 953 AAAMEIEVRGPEADL--PRPKFPALKPHEMSDGKVQFRKVPVPPHRFSPLKRCWMEIYTP 780 A++ME+E EA L P+PKF LKPHEMSDG+VQFRKV VPPHR++PLK+ WM+IYTP Sbjct: 7 ASSMEVETVPSEAKLLPPKPKFEPLKPHEMSDGQVQFRKVNVPPHRYTPLKKAWMDIYTP 66 Query: 779 IYEQMKIDIRMNLKARRVELKTRSDTPDVSNLQKCADFVHAFMLGFDIXXXXXXXXXXXL 600 IYEQMKID+RMNLKARRVELKTR DTPD+SNLQKCADFVHAFMLGFD+ L Sbjct: 67 IYEQMKIDVRMNLKARRVELKTRPDTPDISNLQKCADFVHAFMLGFDVIDAIALLRLDEL 126 Query: 599 YVDSFEIKDVKALRGEHLSRAIGRLSGKGGKTKFAIENSTRTRIVIADTKIHILGSFINI 420 Y++SFEIKDVK LRG+HLSRAIGRLSGKGGKTKFAIEN+++TRIVIADTKIHILGSF NI Sbjct: 127 YIESFEIKDVKTLRGDHLSRAIGRLSGKGGKTKFAIENASKTRIVIADTKIHILGSFANI 186 Query: 419 KVARDSLCSLILGSPAGKVYSKLRAVTARLAER 321 K+ARDSLCSLILGSPAGKVYSKLRAVTARLAER Sbjct: 187 KIARDSLCSLILGSPAGKVYSKLRAVTARLAER 219 >gb|ACU24003.1| unknown [Glycine max] Length = 220 Score = 338 bits (867), Expect = 1e-90 Identities = 169/213 (79%), Positives = 188/213 (88%), Gaps = 2/213 (0%) Frame = -3 Query: 953 AAAMEIEVRGPEADL--PRPKFPALKPHEMSDGKVQFRKVPVPPHRFSPLKRCWMEIYTP 780 A++ME+E EA L P+PKF LKPHEMSDG+VQFRKV VPPHR++PLK+ WM+IYTP Sbjct: 7 ASSMEVETVPSEAKLLPPKPKFEPLKPHEMSDGQVQFRKVNVPPHRYTPLKKAWMDIYTP 66 Query: 779 IYEQMKIDIRMNLKARRVELKTRSDTPDVSNLQKCADFVHAFMLGFDIXXXXXXXXXXXL 600 IYEQMKID+RMNLKARRVELKTR DTPD+SNLQKCADFVHAFMLGFD+ L Sbjct: 67 IYEQMKIDVRMNLKARRVELKTRPDTPDISNLQKCADFVHAFMLGFDVIDAIALLRLDEL 126 Query: 599 YVDSFEIKDVKALRGEHLSRAIGRLSGKGGKTKFAIENSTRTRIVIADTKIHILGSFINI 420 Y++SFEIKDVK LRG+HLSRAIGRLSGKGGKTKFAIEN+++TRIVIADTKIHILGSF NI Sbjct: 127 YIESFEIKDVKTLRGDHLSRAIGRLSGKGGKTKFAIENASKTRIVIADTKIHILGSFANI 186 Query: 419 KVARDSLCSLILGSPAGKVYSKLRAVTARLAER 321 K+ARDSLCSLILGSPAGKVYSKLRAVTARLAER Sbjct: 187 KIARDSLCSLILGSPAGKVYSKLRAVTARLAER 219 >ref|XP_003551374.1| PREDICTED: RNA-binding protein pno1-like [Glycine max] Length = 220 Score = 337 bits (863), Expect = 4e-90 Identities = 168/213 (78%), Positives = 188/213 (88%), Gaps = 2/213 (0%) Frame = -3 Query: 953 AAAMEIEVRGPEADL--PRPKFPALKPHEMSDGKVQFRKVPVPPHRFSPLKRCWMEIYTP 780 A++ME+E EA L P+PKF LKPHEMSDG+VQFRKV VPPHR++PLK+ WM+IY+P Sbjct: 7 ASSMEVETVPSEAKLLPPKPKFEPLKPHEMSDGQVQFRKVNVPPHRYTPLKKAWMDIYSP 66 Query: 779 IYEQMKIDIRMNLKARRVELKTRSDTPDVSNLQKCADFVHAFMLGFDIXXXXXXXXXXXL 600 IYEQMKID+RMNLKARRVELKTR DTPD+SNLQKCADFVHAFMLGFD+ L Sbjct: 67 IYEQMKIDVRMNLKARRVELKTRPDTPDISNLQKCADFVHAFMLGFDVIDAIALLRLDEL 126 Query: 599 YVDSFEIKDVKALRGEHLSRAIGRLSGKGGKTKFAIENSTRTRIVIADTKIHILGSFINI 420 Y++SFEIKDVK LRG+HLSRAIGRLSGKGGKTKFAIEN+++TRIVIADTKIHILGSF NI Sbjct: 127 YIESFEIKDVKTLRGDHLSRAIGRLSGKGGKTKFAIENASKTRIVIADTKIHILGSFANI 186 Query: 419 KVARDSLCSLILGSPAGKVYSKLRAVTARLAER 321 K+ARDSLCSLILGSPAGKVYSKLRAVTARLAER Sbjct: 187 KIARDSLCSLILGSPAGKVYSKLRAVTARLAER 219 >gb|AFW84870.1| putative partner of Nob1 family protein [Zea mays] Length = 240 Score = 335 bits (860), Expect = 8e-90 Identities = 175/221 (79%), Positives = 188/221 (85%), Gaps = 3/221 (1%) Frame = -3 Query: 974 SSEPAGGAAAMEIEV---RGPEADLPRPKFPALKPHEMSDGKVQFRKVPVPPHRFSPLKR 804 S A G ++ E+ V GP A + +P+F AL P+EMS G+ QFRKVPVP HRF+PLKR Sbjct: 20 SMASATGVSSSEMAVDHATGPGA-VDKPRFDALTPNEMSGGRPQFRKVPVPQHRFAPLKR 78 Query: 803 CWMEIYTPIYEQMKIDIRMNLKARRVELKTRSDTPDVSNLQKCADFVHAFMLGFDIXXXX 624 CWMEIYTP+YE MKIDIRMNLKARRVELKTR DTPDVSNLQKCADFVHAFMLGFDI Sbjct: 79 CWMEIYTPVYEHMKIDIRMNLKARRVELKTRQDTPDVSNLQKCADFVHAFMLGFDIADAV 138 Query: 623 XXXXXXXLYVDSFEIKDVKALRGEHLSRAIGRLSGKGGKTKFAIENSTRTRIVIADTKIH 444 LYVDSFEIKDVK LRGEHLSRAIGRLSGKGGKTK+AIENSTRTRIVIADTKIH Sbjct: 139 ALLRLDDLYVDSFEIKDVKTLRGEHLSRAIGRLSGKGGKTKYAIENSTRTRIVIADTKIH 198 Query: 443 ILGSFINIKVARDSLCSLILGSPAGKVYSKLRAVTARLAER 321 ILGSF+NIKVARDSLCSLILGSPAGKVYSKLRAV+ARLAER Sbjct: 199 ILGSFVNIKVARDSLCSLILGSPAGKVYSKLRAVSARLAER 239 >ref|NP_001149708.1| partner of Nob1 [Zea mays] gi|194703132|gb|ACF85650.1| unknown [Zea mays] gi|195629630|gb|ACG36456.1| partner of Nob1 [Zea mays] gi|413952222|gb|AFW84871.1| putative partner of Nob1 family protein [Zea mays] Length = 220 Score = 335 bits (859), Expect = 1e-89 Identities = 174/217 (80%), Positives = 187/217 (86%), Gaps = 3/217 (1%) Frame = -3 Query: 962 AGGAAAMEIEV---RGPEADLPRPKFPALKPHEMSDGKVQFRKVPVPPHRFSPLKRCWME 792 A G ++ E+ V GP A + +P+F AL P+EMS G+ QFRKVPVP HRF+PLKRCWME Sbjct: 4 ATGVSSSEMAVDHATGPGA-VDKPRFDALTPNEMSGGRPQFRKVPVPQHRFAPLKRCWME 62 Query: 791 IYTPIYEQMKIDIRMNLKARRVELKTRSDTPDVSNLQKCADFVHAFMLGFDIXXXXXXXX 612 IYTP+YE MKIDIRMNLKARRVELKTR DTPDVSNLQKCADFVHAFMLGFDI Sbjct: 63 IYTPVYEHMKIDIRMNLKARRVELKTRQDTPDVSNLQKCADFVHAFMLGFDIADAVALLR 122 Query: 611 XXXLYVDSFEIKDVKALRGEHLSRAIGRLSGKGGKTKFAIENSTRTRIVIADTKIHILGS 432 LYVDSFEIKDVK LRGEHLSRAIGRLSGKGGKTK+AIENSTRTRIVIADTKIHILGS Sbjct: 123 LDDLYVDSFEIKDVKTLRGEHLSRAIGRLSGKGGKTKYAIENSTRTRIVIADTKIHILGS 182 Query: 431 FINIKVARDSLCSLILGSPAGKVYSKLRAVTARLAER 321 F+NIKVARDSLCSLILGSPAGKVYSKLRAV+ARLAER Sbjct: 183 FVNIKVARDSLCSLILGSPAGKVYSKLRAVSARLAER 219