BLASTX nr result

ID: Dioscorea21_contig00008029 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00008029
         (1009 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551375.1| PREDICTED: RNA-binding protein pno1-like [Gl...   338   1e-90
gb|ACU24003.1| unknown [Glycine max]                                  338   1e-90
ref|XP_003551374.1| PREDICTED: RNA-binding protein pno1-like [Gl...   337   4e-90
gb|AFW84870.1| putative partner of Nob1 family protein [Zea mays]     335   8e-90
ref|NP_001149708.1| partner of Nob1 [Zea mays] gi|194703132|gb|A...   335   1e-89

>ref|XP_003551375.1| PREDICTED: RNA-binding protein pno1-like [Glycine max]
          Length = 220

 Score =  338 bits (867), Expect = 1e-90
 Identities = 169/213 (79%), Positives = 188/213 (88%), Gaps = 2/213 (0%)
 Frame = -3

Query: 953 AAAMEIEVRGPEADL--PRPKFPALKPHEMSDGKVQFRKVPVPPHRFSPLKRCWMEIYTP 780
           A++ME+E    EA L  P+PKF  LKPHEMSDG+VQFRKV VPPHR++PLK+ WM+IYTP
Sbjct: 7   ASSMEVETVPSEAKLLPPKPKFEPLKPHEMSDGQVQFRKVNVPPHRYTPLKKAWMDIYTP 66

Query: 779 IYEQMKIDIRMNLKARRVELKTRSDTPDVSNLQKCADFVHAFMLGFDIXXXXXXXXXXXL 600
           IYEQMKID+RMNLKARRVELKTR DTPD+SNLQKCADFVHAFMLGFD+           L
Sbjct: 67  IYEQMKIDVRMNLKARRVELKTRPDTPDISNLQKCADFVHAFMLGFDVIDAIALLRLDEL 126

Query: 599 YVDSFEIKDVKALRGEHLSRAIGRLSGKGGKTKFAIENSTRTRIVIADTKIHILGSFINI 420
           Y++SFEIKDVK LRG+HLSRAIGRLSGKGGKTKFAIEN+++TRIVIADTKIHILGSF NI
Sbjct: 127 YIESFEIKDVKTLRGDHLSRAIGRLSGKGGKTKFAIENASKTRIVIADTKIHILGSFANI 186

Query: 419 KVARDSLCSLILGSPAGKVYSKLRAVTARLAER 321
           K+ARDSLCSLILGSPAGKVYSKLRAVTARLAER
Sbjct: 187 KIARDSLCSLILGSPAGKVYSKLRAVTARLAER 219


>gb|ACU24003.1| unknown [Glycine max]
          Length = 220

 Score =  338 bits (867), Expect = 1e-90
 Identities = 169/213 (79%), Positives = 188/213 (88%), Gaps = 2/213 (0%)
 Frame = -3

Query: 953 AAAMEIEVRGPEADL--PRPKFPALKPHEMSDGKVQFRKVPVPPHRFSPLKRCWMEIYTP 780
           A++ME+E    EA L  P+PKF  LKPHEMSDG+VQFRKV VPPHR++PLK+ WM+IYTP
Sbjct: 7   ASSMEVETVPSEAKLLPPKPKFEPLKPHEMSDGQVQFRKVNVPPHRYTPLKKAWMDIYTP 66

Query: 779 IYEQMKIDIRMNLKARRVELKTRSDTPDVSNLQKCADFVHAFMLGFDIXXXXXXXXXXXL 600
           IYEQMKID+RMNLKARRVELKTR DTPD+SNLQKCADFVHAFMLGFD+           L
Sbjct: 67  IYEQMKIDVRMNLKARRVELKTRPDTPDISNLQKCADFVHAFMLGFDVIDAIALLRLDEL 126

Query: 599 YVDSFEIKDVKALRGEHLSRAIGRLSGKGGKTKFAIENSTRTRIVIADTKIHILGSFINI 420
           Y++SFEIKDVK LRG+HLSRAIGRLSGKGGKTKFAIEN+++TRIVIADTKIHILGSF NI
Sbjct: 127 YIESFEIKDVKTLRGDHLSRAIGRLSGKGGKTKFAIENASKTRIVIADTKIHILGSFANI 186

Query: 419 KVARDSLCSLILGSPAGKVYSKLRAVTARLAER 321
           K+ARDSLCSLILGSPAGKVYSKLRAVTARLAER
Sbjct: 187 KIARDSLCSLILGSPAGKVYSKLRAVTARLAER 219


>ref|XP_003551374.1| PREDICTED: RNA-binding protein pno1-like [Glycine max]
          Length = 220

 Score =  337 bits (863), Expect = 4e-90
 Identities = 168/213 (78%), Positives = 188/213 (88%), Gaps = 2/213 (0%)
 Frame = -3

Query: 953 AAAMEIEVRGPEADL--PRPKFPALKPHEMSDGKVQFRKVPVPPHRFSPLKRCWMEIYTP 780
           A++ME+E    EA L  P+PKF  LKPHEMSDG+VQFRKV VPPHR++PLK+ WM+IY+P
Sbjct: 7   ASSMEVETVPSEAKLLPPKPKFEPLKPHEMSDGQVQFRKVNVPPHRYTPLKKAWMDIYSP 66

Query: 779 IYEQMKIDIRMNLKARRVELKTRSDTPDVSNLQKCADFVHAFMLGFDIXXXXXXXXXXXL 600
           IYEQMKID+RMNLKARRVELKTR DTPD+SNLQKCADFVHAFMLGFD+           L
Sbjct: 67  IYEQMKIDVRMNLKARRVELKTRPDTPDISNLQKCADFVHAFMLGFDVIDAIALLRLDEL 126

Query: 599 YVDSFEIKDVKALRGEHLSRAIGRLSGKGGKTKFAIENSTRTRIVIADTKIHILGSFINI 420
           Y++SFEIKDVK LRG+HLSRAIGRLSGKGGKTKFAIEN+++TRIVIADTKIHILGSF NI
Sbjct: 127 YIESFEIKDVKTLRGDHLSRAIGRLSGKGGKTKFAIENASKTRIVIADTKIHILGSFANI 186

Query: 419 KVARDSLCSLILGSPAGKVYSKLRAVTARLAER 321
           K+ARDSLCSLILGSPAGKVYSKLRAVTARLAER
Sbjct: 187 KIARDSLCSLILGSPAGKVYSKLRAVTARLAER 219


>gb|AFW84870.1| putative partner of Nob1 family protein [Zea mays]
          Length = 240

 Score =  335 bits (860), Expect = 8e-90
 Identities = 175/221 (79%), Positives = 188/221 (85%), Gaps = 3/221 (1%)
 Frame = -3

Query: 974 SSEPAGGAAAMEIEV---RGPEADLPRPKFPALKPHEMSDGKVQFRKVPVPPHRFSPLKR 804
           S   A G ++ E+ V    GP A + +P+F AL P+EMS G+ QFRKVPVP HRF+PLKR
Sbjct: 20  SMASATGVSSSEMAVDHATGPGA-VDKPRFDALTPNEMSGGRPQFRKVPVPQHRFAPLKR 78

Query: 803 CWMEIYTPIYEQMKIDIRMNLKARRVELKTRSDTPDVSNLQKCADFVHAFMLGFDIXXXX 624
           CWMEIYTP+YE MKIDIRMNLKARRVELKTR DTPDVSNLQKCADFVHAFMLGFDI    
Sbjct: 79  CWMEIYTPVYEHMKIDIRMNLKARRVELKTRQDTPDVSNLQKCADFVHAFMLGFDIADAV 138

Query: 623 XXXXXXXLYVDSFEIKDVKALRGEHLSRAIGRLSGKGGKTKFAIENSTRTRIVIADTKIH 444
                  LYVDSFEIKDVK LRGEHLSRAIGRLSGKGGKTK+AIENSTRTRIVIADTKIH
Sbjct: 139 ALLRLDDLYVDSFEIKDVKTLRGEHLSRAIGRLSGKGGKTKYAIENSTRTRIVIADTKIH 198

Query: 443 ILGSFINIKVARDSLCSLILGSPAGKVYSKLRAVTARLAER 321
           ILGSF+NIKVARDSLCSLILGSPAGKVYSKLRAV+ARLAER
Sbjct: 199 ILGSFVNIKVARDSLCSLILGSPAGKVYSKLRAVSARLAER 239


>ref|NP_001149708.1| partner of Nob1 [Zea mays] gi|194703132|gb|ACF85650.1| unknown [Zea
           mays] gi|195629630|gb|ACG36456.1| partner of Nob1 [Zea
           mays] gi|413952222|gb|AFW84871.1| putative partner of
           Nob1 family protein [Zea mays]
          Length = 220

 Score =  335 bits (859), Expect = 1e-89
 Identities = 174/217 (80%), Positives = 187/217 (86%), Gaps = 3/217 (1%)
 Frame = -3

Query: 962 AGGAAAMEIEV---RGPEADLPRPKFPALKPHEMSDGKVQFRKVPVPPHRFSPLKRCWME 792
           A G ++ E+ V    GP A + +P+F AL P+EMS G+ QFRKVPVP HRF+PLKRCWME
Sbjct: 4   ATGVSSSEMAVDHATGPGA-VDKPRFDALTPNEMSGGRPQFRKVPVPQHRFAPLKRCWME 62

Query: 791 IYTPIYEQMKIDIRMNLKARRVELKTRSDTPDVSNLQKCADFVHAFMLGFDIXXXXXXXX 612
           IYTP+YE MKIDIRMNLKARRVELKTR DTPDVSNLQKCADFVHAFMLGFDI        
Sbjct: 63  IYTPVYEHMKIDIRMNLKARRVELKTRQDTPDVSNLQKCADFVHAFMLGFDIADAVALLR 122

Query: 611 XXXLYVDSFEIKDVKALRGEHLSRAIGRLSGKGGKTKFAIENSTRTRIVIADTKIHILGS 432
              LYVDSFEIKDVK LRGEHLSRAIGRLSGKGGKTK+AIENSTRTRIVIADTKIHILGS
Sbjct: 123 LDDLYVDSFEIKDVKTLRGEHLSRAIGRLSGKGGKTKYAIENSTRTRIVIADTKIHILGS 182

Query: 431 FINIKVARDSLCSLILGSPAGKVYSKLRAVTARLAER 321
           F+NIKVARDSLCSLILGSPAGKVYSKLRAV+ARLAER
Sbjct: 183 FVNIKVARDSLCSLILGSPAGKVYSKLRAVSARLAER 219


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