BLASTX nr result

ID: Dioscorea21_contig00007479 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00007479
         (640 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003563863.1| PREDICTED: elongation factor G, mitochondria...   382   e-104
ref|XP_003563862.1| PREDICTED: elongation factor G, mitochondria...   382   e-104
emb|CAN77652.1| hypothetical protein VITISV_032323 [Vitis vinifera]   380   e-103
tpg|DAA52463.1| TPA: putative translation elongation factor fami...   379   e-103
ref|XP_002463532.1| hypothetical protein SORBIDRAFT_01g001500 [S...   379   e-103

>ref|XP_003563863.1| PREDICTED: elongation factor G, mitochondrial-like isoform 2
           [Brachypodium distachyon]
          Length = 704

 Score =  382 bits (982), Expect = e-104
 Identities = 188/213 (88%), Positives = 203/213 (95%)
 Frame = +1

Query: 1   SPRDLKMAIRRATIARKFVPVYMGSAFKNKGVQPLLDGVLDYLPCPTEVENHALDQNNSE 180
           S  +LK AIRRAT+ARKF+PVYMGSAFKNKGVQPLL+GVLDYLPCP EVEN+ALDQN SE
Sbjct: 298 SANELKAAIRRATVARKFIPVYMGSAFKNKGVQPLLNGVLDYLPCPAEVENYALDQNKSE 357

Query: 181 ERVLLSGTPAGSLVALAFKLEEGRFGQLTYLRIYEGVIKKGEYIVNINTGKKIKVPRLVR 360
           E+VLL GTPAG LVALAFKLEEGRFGQLTYLRIY+GVI+KG++I N+NTGKKIKVPRLVR
Sbjct: 358 EKVLLGGTPAGPLVALAFKLEEGRFGQLTYLRIYDGVIRKGDFIYNVNTGKKIKVPRLVR 417

Query: 361 MHSNEMEDIQEAYAGQIVAVFGVDCASGDTFTDGSVRYTMTSMNVPEPVMSLAVSPVSKD 540
           MHSNEMEDIQEA+AGQIVAVFGVDCASGDTFTDGSV+YTMTSMNVPEPVMSLAV+P+SKD
Sbjct: 418 MHSNEMEDIQEAHAGQIVAVFGVDCASGDTFTDGSVKYTMTSMNVPEPVMSLAVNPISKD 477

Query: 541 SGGQFSKALNRFTREDPTFRVGLDAESGQTIIS 639
           SGGQFSKALNRF REDPTFRVGLD ESGQTIIS
Sbjct: 478 SGGQFSKALNRFQREDPTFRVGLDPESGQTIIS 510


>ref|XP_003563862.1| PREDICTED: elongation factor G, mitochondrial-like isoform 1
           [Brachypodium distachyon]
          Length = 758

 Score =  382 bits (982), Expect = e-104
 Identities = 188/213 (88%), Positives = 203/213 (95%)
 Frame = +1

Query: 1   SPRDLKMAIRRATIARKFVPVYMGSAFKNKGVQPLLDGVLDYLPCPTEVENHALDQNNSE 180
           S  +LK AIRRAT+ARKF+PVYMGSAFKNKGVQPLL+GVLDYLPCP EVEN+ALDQN SE
Sbjct: 298 SANELKAAIRRATVARKFIPVYMGSAFKNKGVQPLLNGVLDYLPCPAEVENYALDQNKSE 357

Query: 181 ERVLLSGTPAGSLVALAFKLEEGRFGQLTYLRIYEGVIKKGEYIVNINTGKKIKVPRLVR 360
           E+VLL GTPAG LVALAFKLEEGRFGQLTYLRIY+GVI+KG++I N+NTGKKIKVPRLVR
Sbjct: 358 EKVLLGGTPAGPLVALAFKLEEGRFGQLTYLRIYDGVIRKGDFIYNVNTGKKIKVPRLVR 417

Query: 361 MHSNEMEDIQEAYAGQIVAVFGVDCASGDTFTDGSVRYTMTSMNVPEPVMSLAVSPVSKD 540
           MHSNEMEDIQEA+AGQIVAVFGVDCASGDTFTDGSV+YTMTSMNVPEPVMSLAV+P+SKD
Sbjct: 418 MHSNEMEDIQEAHAGQIVAVFGVDCASGDTFTDGSVKYTMTSMNVPEPVMSLAVNPISKD 477

Query: 541 SGGQFSKALNRFTREDPTFRVGLDAESGQTIIS 639
           SGGQFSKALNRF REDPTFRVGLD ESGQTIIS
Sbjct: 478 SGGQFSKALNRFQREDPTFRVGLDPESGQTIIS 510


>emb|CAN77652.1| hypothetical protein VITISV_032323 [Vitis vinifera]
          Length = 746

 Score =  380 bits (975), Expect = e-103
 Identities = 187/213 (87%), Positives = 202/213 (94%)
 Frame = +1

Query: 1   SPRDLKMAIRRATIARKFVPVYMGSAFKNKGVQPLLDGVLDYLPCPTEVENHALDQNNSE 180
           S   L+ AIRRAT+A+KF+PV+MGSAFKNKGVQPLLDGVL YLPCPTEV N+ALDQN +E
Sbjct: 284 SSASLEEAIRRATVAQKFIPVFMGSAFKNKGVQPLLDGVLSYLPCPTEVSNYALDQNKNE 343

Query: 181 ERVLLSGTPAGSLVALAFKLEEGRFGQLTYLRIYEGVIKKGEYIVNINTGKKIKVPRLVR 360
           E+V LSGTP G LVALAFKLEEGRFGQLTYLRIYEGVI+KG++I+N+NTGKKIKVPRLVR
Sbjct: 344 EKVTLSGTPVGPLVALAFKLEEGRFGQLTYLRIYEGVIRKGDFIINVNTGKKIKVPRLVR 403

Query: 361 MHSNEMEDIQEAYAGQIVAVFGVDCASGDTFTDGSVRYTMTSMNVPEPVMSLAVSPVSKD 540
           MHSNEMEDIQEA+AGQIVAVFGVDCASGDTFTDGSVRYTMTSMNVPEPVMSLA+SPVSKD
Sbjct: 404 MHSNEMEDIQEAHAGQIVAVFGVDCASGDTFTDGSVRYTMTSMNVPEPVMSLAISPVSKD 463

Query: 541 SGGQFSKALNRFTREDPTFRVGLDAESGQTIIS 639
           SGGQFSKALNRF REDPTFRVGLDAESGQTIIS
Sbjct: 464 SGGQFSKALNRFQREDPTFRVGLDAESGQTIIS 496


>tpg|DAA52463.1| TPA: putative translation elongation factor family protein isoform
           1 [Zea mays] gi|414873907|tpg|DAA52464.1| TPA: putative
           translation elongation factor family protein isoform 2
           [Zea mays]
          Length = 753

 Score =  379 bits (974), Expect = e-103
 Identities = 187/209 (89%), Positives = 201/209 (96%)
 Frame = +1

Query: 13  LKMAIRRATIARKFVPVYMGSAFKNKGVQPLLDGVLDYLPCPTEVENHALDQNNSEERVL 192
           LK AIRRAT+ARKF+PVYMGSAFKNKGVQPLLDGVLDYLPCP EV N+ALDQN SEE+VL
Sbjct: 297 LKAAIRRATVARKFIPVYMGSAFKNKGVQPLLDGVLDYLPCPLEVYNYALDQNKSEEKVL 356

Query: 193 LSGTPAGSLVALAFKLEEGRFGQLTYLRIYEGVIKKGEYIVNINTGKKIKVPRLVRMHSN 372
           L+GTPA  LVALAFKLEEGRFGQLTYLRIY+GVI+KG++I N+NTGKKIKVPRLVRMHSN
Sbjct: 357 LAGTPAEPLVALAFKLEEGRFGQLTYLRIYDGVIRKGDFIYNVNTGKKIKVPRLVRMHSN 416

Query: 373 EMEDIQEAYAGQIVAVFGVDCASGDTFTDGSVRYTMTSMNVPEPVMSLAVSPVSKDSGGQ 552
           EMEDIQEAYAGQIVAVFGVDCASGDTFTDG+V+YTMTSMNVPEPVMSLAVSP+SKDSGGQ
Sbjct: 417 EMEDIQEAYAGQIVAVFGVDCASGDTFTDGTVKYTMTSMNVPEPVMSLAVSPISKDSGGQ 476

Query: 553 FSKALNRFTREDPTFRVGLDAESGQTIIS 639
           FSKALNRF +EDPTFRVGLDAESGQTIIS
Sbjct: 477 FSKALNRFQKEDPTFRVGLDAESGQTIIS 505


>ref|XP_002463532.1| hypothetical protein SORBIDRAFT_01g001500 [Sorghum bicolor]
           gi|241917386|gb|EER90530.1| hypothetical protein
           SORBIDRAFT_01g001500 [Sorghum bicolor]
          Length = 758

 Score =  379 bits (974), Expect = e-103
 Identities = 186/209 (88%), Positives = 202/209 (96%)
 Frame = +1

Query: 13  LKMAIRRATIARKFVPVYMGSAFKNKGVQPLLDGVLDYLPCPTEVENHALDQNNSEERVL 192
           LK AIRRAT+A+KF+PVYMGSAFKNKGVQPLLDGVLDYLPCP EV+N+ALDQN SEE+VL
Sbjct: 302 LKAAIRRATVAQKFIPVYMGSAFKNKGVQPLLDGVLDYLPCPLEVDNYALDQNKSEEKVL 361

Query: 193 LSGTPAGSLVALAFKLEEGRFGQLTYLRIYEGVIKKGEYIVNINTGKKIKVPRLVRMHSN 372
           L+GTPA  LVALAFKLEEGRFGQLTYLRIY+GVI+KG++I N+NTGKKIKVPRLVRMHSN
Sbjct: 362 LAGTPAEPLVALAFKLEEGRFGQLTYLRIYDGVIRKGDFIYNVNTGKKIKVPRLVRMHSN 421

Query: 373 EMEDIQEAYAGQIVAVFGVDCASGDTFTDGSVRYTMTSMNVPEPVMSLAVSPVSKDSGGQ 552
           EMEDIQEAYAGQIVAVFGVDCASGDTFTDG+V+YTMTSMNVPEPVMSLAVSP+SKDSGGQ
Sbjct: 422 EMEDIQEAYAGQIVAVFGVDCASGDTFTDGTVKYTMTSMNVPEPVMSLAVSPISKDSGGQ 481

Query: 553 FSKALNRFTREDPTFRVGLDAESGQTIIS 639
           FSKALNRF +EDPTFRVGLDAESGQTIIS
Sbjct: 482 FSKALNRFQKEDPTFRVGLDAESGQTIIS 510


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