BLASTX nr result

ID: Dioscorea21_contig00007470 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00007470
         (638 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001060277.1| Os07g0616600 [Oryza sativa Japonica Group] g...   318   5e-85
gb|EAZ04711.1| hypothetical protein OsI_26872 [Oryza sativa Indi...   318   5e-85
gb|EAY90376.1| hypothetical protein OsI_11954 [Oryza sativa Indi...   317   9e-85
ref|XP_002463182.1| hypothetical protein SORBIDRAFT_02g039270 [S...   317   2e-84
gb|AFC88836.1| 40S ribosomal protein SA-like protein, partial [M...   315   5e-84

>ref|NP_001060277.1| Os07g0616600 [Oryza sativa Japonica Group] gi|313103629|pdb|3IZ6|A
           Chain A, Localization Of The Small Subunit Ribosomal
           Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum
           Translating 80s Ribosome gi|33146943|dbj|BAC79991.1|
           putative 40S ribosomal protein [Oryza sativa Japonica
           Group] gi|113611813|dbj|BAF22191.1| Os07g0616600 [Oryza
           sativa Japonica Group] gi|125601085|gb|EAZ40661.1|
           hypothetical protein OsJ_25132 [Oryza sativa Japonica
           Group] gi|215678910|dbj|BAG96340.1| unnamed protein
           product [Oryza sativa Japonica Group]
           gi|215734975|dbj|BAG95697.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215740977|dbj|BAG97472.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215764959|dbj|BAG86656.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 305

 Score =  318 bits (815), Expect = 5e-85
 Identities = 155/170 (91%), Positives = 163/170 (95%)
 Frame = +1

Query: 127 ASDRATMARQMTTREQDIQMMLAADVHLGTKNCDFQMERYVFKRRSDGIFIINLGKTWEK 306
           A++    AR ++ REQDIQMMLAADVHLGTKNCDFQMERYV+KRR+DGI+IINLGKTWEK
Sbjct: 2   AAEGGAAARALSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEK 61

Query: 307 LQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHPIAGRHTPGTFTNQLQTSFS 486
           LQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAH IAGRHTPGTFTNQLQTSFS
Sbjct: 62  LQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFS 121

Query: 487 EPRLLILTDPRTDHQPIKESSLGNIPTIAFCDTDSPMRYVDIGIPANNKG 636
           EPRLLILTDPRTDHQPIKES+LGNIPTIAFCDTDSPMRYVDIGIPANNKG
Sbjct: 122 EPRLLILTDPRTDHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKG 171


>gb|EAZ04711.1| hypothetical protein OsI_26872 [Oryza sativa Indica Group]
          Length = 305

 Score =  318 bits (815), Expect = 5e-85
 Identities = 155/170 (91%), Positives = 163/170 (95%)
 Frame = +1

Query: 127 ASDRATMARQMTTREQDIQMMLAADVHLGTKNCDFQMERYVFKRRSDGIFIINLGKTWEK 306
           A++    AR ++ REQDIQMMLAADVHLGTKNCDFQMERYV+KRR+DGI+IINLGKTWEK
Sbjct: 2   AAEGGAAARALSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEK 61

Query: 307 LQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHPIAGRHTPGTFTNQLQTSFS 486
           LQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAH IAGRHTPGTFTNQLQTSFS
Sbjct: 62  LQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFS 121

Query: 487 EPRLLILTDPRTDHQPIKESSLGNIPTIAFCDTDSPMRYVDIGIPANNKG 636
           EPRLLILTDPRTDHQPIKES+LGNIPTIAFCDTDSPMRYVDIGIPANNKG
Sbjct: 122 EPRLLILTDPRTDHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKG 171


>gb|EAY90376.1| hypothetical protein OsI_11954 [Oryza sativa Indica Group]
          Length = 310

 Score =  317 bits (813), Expect = 9e-85
 Identities = 155/162 (95%), Positives = 159/162 (98%)
 Frame = +1

Query: 151 RQMTTREQDIQMMLAADVHLGTKNCDFQMERYVFKRRSDGIFIINLGKTWEKLQLAARVI 330
           R ++ REQDIQMMLAADVHLGTKNCDFQMERYV+KRRSDGIFIINLGKTWEKLQLAARVI
Sbjct: 12  RALSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRSDGIFIINLGKTWEKLQLAARVI 71

Query: 331 VAIENPQDIIVQSARPYGQRAVLKFAQYTGAHPIAGRHTPGTFTNQLQTSFSEPRLLILT 510
           VAIENPQDIIVQSARPYGQRAVLKFAQYTGAH IAGRHTPGTFTNQLQTSFSEPRLLILT
Sbjct: 72  VAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILT 131

Query: 511 DPRTDHQPIKESSLGNIPTIAFCDTDSPMRYVDIGIPANNKG 636
           DPRTDHQPIKES+LGNIPTIAFCDTDSPMRYVDIGIPANNKG
Sbjct: 132 DPRTDHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKG 173


>ref|XP_002463182.1| hypothetical protein SORBIDRAFT_02g039270 [Sorghum bicolor]
           gi|241926559|gb|EER99703.1| hypothetical protein
           SORBIDRAFT_02g039270 [Sorghum bicolor]
          Length = 306

 Score =  317 bits (811), Expect = 2e-84
 Identities = 154/163 (94%), Positives = 160/163 (98%)
 Frame = +1

Query: 148 ARQMTTREQDIQMMLAADVHLGTKNCDFQMERYVFKRRSDGIFIINLGKTWEKLQLAARV 327
           AR ++ REQDIQMMLAADVHLGTKNCDFQMERYV+KRR+DGI+IINLGKTWEKLQLAARV
Sbjct: 10  ARALSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQLAARV 69

Query: 328 IVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHPIAGRHTPGTFTNQLQTSFSEPRLLIL 507
           IVAIENPQDIIVQSARPYGQRAVLKFAQYTGAH IAGRHTPGTFTNQLQTSFSEPRLLIL
Sbjct: 70  IVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLIL 129

Query: 508 TDPRTDHQPIKESSLGNIPTIAFCDTDSPMRYVDIGIPANNKG 636
           TDPRTDHQPIKES+LGNIPTIAFCDTDSPMRYVDIGIPANNKG
Sbjct: 130 TDPRTDHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKG 172


>gb|AFC88836.1| 40S ribosomal protein SA-like protein, partial [Miscanthus
           sinensis]
          Length = 281

 Score =  315 bits (807), Expect = 5e-84
 Identities = 153/162 (94%), Positives = 159/162 (98%)
 Frame = +1

Query: 151 RQMTTREQDIQMMLAADVHLGTKNCDFQMERYVFKRRSDGIFIINLGKTWEKLQLAARVI 330
           R ++ REQDIQMMLAADVHLGTKNCDFQMERYV+KRR+DGI+IINLGKTWEKLQLAARVI
Sbjct: 1   RALSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQLAARVI 60

Query: 331 VAIENPQDIIVQSARPYGQRAVLKFAQYTGAHPIAGRHTPGTFTNQLQTSFSEPRLLILT 510
           VAIENPQDIIVQSARPYGQRAVLKFAQYTGAH IAGRHTPGTFTNQLQTSFSEPRLLILT
Sbjct: 61  VAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILT 120

Query: 511 DPRTDHQPIKESSLGNIPTIAFCDTDSPMRYVDIGIPANNKG 636
           DPRTDHQPIKES+LGNIPTIAFCDTDSPMRYVDIGIPANNKG
Sbjct: 121 DPRTDHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKG 162


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